Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038241.1 Olea europaea HOM05D007183 ORTHO05D008829 2.4e-188 662.1 360 100.0
PGSC0003DMG400045796 Solanum tuberosum HOM05D007183 ORTHO05D008829 1.7e-98 363.6 368 52.4
Nitab4.5_0007319g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.3e-97 359.4 372 52.2
Nitab4.5_0001820g0090 Nicotiana tabacum HOM05D007183 ORTHO05D008829 7.3e-97 358.2 371 51.8
TWI38G0385 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 7.3e-97 358.2 375 49.1
Migut.M01164 Erythranthe guttata HOM05D007183 ORTHO05D008829 3.6e-96 355.9 373 60.3
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 6.2e-96 355.1 371 48.2
Ciclev10017704m.g Citrus clementina HOM05D007183 ORTHO05D008829 1.2e-94 350.9 376 48.1
Sopen02g023560 Solanum pennellii HOM05D007183 ORTHO05D008829 1.5e-94 350.5 370 50.5
Thecc.02G174600 Theobroma cacao HOM05D007183 ORTHO05D008829 2.0e-94 350.1 372 50.3
Solyc02g078710.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 5.8e-94 348.6 370 50.8
Potri.011G046100 Populus trichocarpa HOM05D007183 ORTHO05D008829 8.3e-93 344.7 375 47.7
Aqoxy1G02644 Aquilegia oxysepala HOM05D007183 ORTHO05D008829 9.2e-92 341.3 377 54.9
Manes.16G023400 Manihot esculenta HOM05D007183 ORTHO05D008829 1.6e-91 340.5 377 47.5
Manes.13G149600 Manihot esculenta HOM05D007183 ORTHO05D008829 6.0e-91 338.6 375 47.7
Prupe.4G040300 Prunus persica HOM05D007183 ORTHO05D008829 6.0e-91 338.6 379 45.9
Dinv03840 Davidia involucrata HOM05D007183 ORTHO05D008829 5.1e-90 335.5 358 48.9
Potri.004G037400 Populus trichocarpa HOM05D007183 ORTHO05D008829 1.1e-89 334.3 374 46.0
GSVIVG01006947001 Vitis vinifera HOM05D007183 ORTHO05D008829 1.1e-89 334.3 366 48.9
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 1.5e-89 334.0 372 49.2
MD10G1300400 Malus domestica HOM05D007183 ORTHO05D008829 1.9e-89 333.6 377 46.2
Duzib235G0436 Durio zibethinus HOM05D007183 ORTHO05D008829 3.3e-89 332.8 370 56.8
TAR629G0430 Trochodendron aralioides HOM05D007183 ORTHO05D008829 1.2e-88 330.9 378 46.8
Gohir.D02G181900 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.8e-88 329.7 357 48.7
Gorai.005G204400 Gossypium raimondii HOM05D007183 ORTHO05D008829 2.8e-88 329.7 357 48.7
Gorai.009G171300 Gossypium raimondii HOM05D007183 ORTHO05D008829 4.7e-88 328.9 381 55.4
Gohir.D05G166200 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.8e-87 327.0 381 55.4
MD05G1322500 Malus domestica HOM05D007183 ORTHO05D008829 5.2e-87 325.5 376 46.3
FvH4_3g27971 Fragaria vesca HOM05D007183 ORTHO05D008829 1.2e-86 324.3 380 46.6
RcHm_v2.0_Chr5g0007471 Rosa chinensis HOM05D007183 ORTHO05D008829 2.6e-86 323.2 377 46.2
Gorai.011G024700 Gossypium raimondii HOM05D007183 ORTHO05D008829 3.4e-86 322.8 363 47.1
Gohir.A10G022800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.2e-85 320.1 363 46.3
Glyma.13G243900 Glycine max HOM05D007183 ORTHO05D008829 2.9e-85 319.7 379 45.9
Nitab4.5_0001871g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.7e-85 319.3 374 53.7
Gohir.A05G163250 Gossypium hirsutum HOM05D007183 ORTHO05D008829 6.4e-85 318.5 378 46.0
Gohir.D10G023600 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.4e-84 317.4 363 46.3
GSVIVG01030561001 Vitis vinifera HOM05D007183 ORTHO05D008829 1.9e-84 317.0 371 45.3
Ca_00299_v3 Cicer arietinum L. HOM05D007183 ORTHO05D008829 7.1e-84 315.1 374 45.7
Nitab4.5_0002370g0040 Nicotiana tabacum HOM05D007183 ORTHO05D008829 7.1e-84 315.1 373 47.2
Lj6g0020427 Lotus japonicus HOM05D007183 ORTHO05D008829 1.6e-83 313.9 372 47.0
Psat1g207000 Pisum sativum HOM05D007183 ORTHO05D008829 2.7e-83 313.2 371 45.6
COL.COLO4_35412 Corchorus olitorius HOM05D007183 ORTHO05D008829 7.8e-83 311.6 334 48.8
Medtr2g012790 Medicago truncatula HOM05D007183 ORTHO05D008829 7.8e-83 311.6 374 45.7
Peaxi162Scf00007g00283 Petunia axillaris HOM05D007183 ORTHO05D008829 1.7e-82 310.5 370 47.6
Phvul.006G189500 Phaseolus vulgaris HOM05D007183 ORTHO05D008829 5.6e-81 305.4 375 42.9
Cc05_g06690 Coffea canephora HOM05D007183 ORTHO05D008829 7.3e-81 305.1 347 44.7
VMungo0540G0277 Vigna mungo HOM05D007183 ORTHO05D008829 1.2e-80 304.3 375 42.9
PGR042G2243 Punica granatum HOM05D007183 ORTHO05D008829 2.8e-80 303.1 379 45.4
TPR.G36795 Trifolium pratense HOM05D007183 ORTHO05D008829 1.1e-79 301.2 375 44.5
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 4.0e-79 299.3 378 42.9
Eucgr.E03363 Eucalyptus grandis HOM05D007183 ORTHO05D008829 1.2e-78 297.7 364 49.7
arahy.Tifrunner.gnm1.ann1.R2A86L Arachis hypogaea HOM05D007183 ORTHO05D008829 3.4e-78 296.2 369 44.2
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 1.3e-77 294.3 363 41.6
TPR.G36730 Trifolium pratense HOM05D007183 ORTHO05D008829 2.2e-77 293.5 384 43.2
arahy.Tifrunner.gnm1.ann1.CVYZ1N Arachis hypogaea HOM05D007183 ORTHO05D008829 3.8e-77 292.7 369 43.4
Eucgr.D00687 Eucalyptus grandis HOM05D007183 ORTHO05D008829 8.4e-77 291.6 389 49.1
Solyc07g054570.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 1.1e-76 291.2 373 52.3
Actinidia39436 Actinidia chinensis HOM05D007183 ORTHO05D008829 1.4e-76 290.8 363 55.1
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 1.4e-76 290.8 379 44.3
Haze_13111 Corylus avellana HOM05D007183 ORTHO05D008829 1.9e-76 290.4 347 45.2
Actinidia09880 Actinidia chinensis HOM05D007183 ORTHO05D008829 3.2e-76 289.7 345 53.3
Hma1.2p1_0191F.1_g083390 Hydrangea macrophylla HOM05D007183 ORTHO05D008829 4.2e-76 289.3 379 43.3
ATR0693G416 Amborella trichopoda HOM05D007183 ORTHO05D008829 2.7e-75 286.6 365 41.9
CsaV3_7G004260 Cucumis sativus L. HOM05D007183 ORTHO05D008829 3.5e-75 286.2 367 41.4
Dinv40521 Davidia involucrata HOM05D007183 ORTHO05D008829 2.3e-74 283.5 376 42.8
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 2.3e-74 283.5 360 41.1
GSVIVG01006336001 Vitis vinifera HOM05D007183 ORTHO05D008829 1.9e-73 280.4 292 51.0
Lj2P283T62 Lonicera japonica HOM05D007183 ORTHO05D008829 5.6e-73 278.9 265 52.8
PSO675G2267 Papaver somniferum HOM05D007183 ORTHO05D008829 5.6e-73 278.9 369 40.9
MBI02_g37921_MAGBIO Magnolia biondii HOM05D007183 ORTHO05D008829 9.6e-73 278.1 298 56.7
Gohir.A03G158800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.3e-72 277.7 315 47.0
Haze_06540 Corylus avellana HOM05D007183 ORTHO05D008829 2.1e-72 276.9 373 41.8
Migut.H01046 Erythranthe guttata HOM05D007183 ORTHO05D008829 2.8e-72 276.6 338 53.8
COL.COLO4_31536 Corchorus olitorius HOM05D007183 ORTHO05D008829 6.2e-72 275.4 299 60.2
HanXRQChr16g0517841 Helianthus annuus HOM05D007183 ORTHO05D008829 6.2e-72 275.4 362 41.4
CANSAT35G0251 Cannabis sativa HOM05D007183 ORTHO05D008829 1.4e-71 274.2 378 42.3
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 1.4e-71 274.2 362 40.9
PSO541G4014 Papaver somniferum HOM05D007183 ORTHO05D008829 1.5e-70 270.8 369 40.1
Solyc10g008530.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 5.8e-70 268.9 338 44.1
Glyma.15G069800 Glycine max HOM05D007183 ORTHO05D008829 8.4e-69 265.0 271 50.6
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 1.6e-67 260.8 364 42.3
Cfa000386 Carpinus fangiana HOM05D007183 ORTHO05D008829 3.5e-67 259.6 366 40.7
Cpa.g.sc34.121 Carica papaya HOM05D007183 ORTHO05D008829 4.3e-65 252.7 270 49.3
CAN.G996.14 Capsicum annuum HOM05D007183 ORTHO05D008829 8.1e-64 248.4 300 55.7
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 1.8e-63 247.3 371 37.5
CiPaw.09G053400 Carya illinoinensis HOM05D007183 ORTHO05D008829 2.0e-62 243.8 357 39.5
SEGI_07341 Sequoiadendron giganteum HOM05D007183 ORTHO05D008829 9.9e-62 241.5 336 45.5
MELO3C018752.2 Cucumis melo HOM05D007183 ORTHO05D008829 4.6e-59 232.6 291 41.9
Zm00001eb258250 Zea mays HOM05D007183 ORTHO05D008829 1.0e-58 231.5 382 39.3
PGSC0003DMG400042494 Solanum tuberosum HOM05D007183 ORTHO05D008829 1.3e-58 231.1 300 43.7
Solyc08g068470.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 6.7e-58 228.8 297 55.6
Eucgr.L02005 Eucalyptus grandis HOM05D007183 ORTHO05D008829 5.6e-57 225.7 288 40.6
ECA234G1429 Erigeron canadensis HOM05D007183 ORTHO05D000476 3.1e-55 219.9 349 37.2
CAN.G168.28 Capsicum annuum HOM05D007183 ORTHO05D008829 7.9e-51 205.3 273 40.7
Cc00_g11490 Coffea canephora HOM05D007183 ORTHO05D008829 3.1e-47 193.4 268 42.2
DCAR_021231 Daucus carota HOM05D007183 ORTHO05D008829 4.6e-43 179.5 156 51.9
AagrBONN_evm.TU.Sc2ySwM_117.3060 Anthoceros agrestis HOM05D007183 ORTHO05D008829 1.9e-41 174.1 353 41.4
SMO358G0266 Selaginella moellendorffii HOM05D007183 ORTHO05D008829 2.4e-39 167.2 356 29.2
Peaxi162Scf00812g00041 Petunia axillaris HOM05D007183 ORTHO05D008829 5.3e-39 166.0 149 54.4
Lj8A115T58 Lonicera japonica HOM05D007183 ORTHO05D008829 3.8e-37 159.8 320 34.1
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 1.4e-36 157.9 331 29.0
Eucgr.D00692 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.6e-35 153.3 334 31.4
Oeu058749.1 Olea europaea HOM05D007183 ORTHO05D008829 4.8e-32 142.9 75 92.0
Actinidia01436 Actinidia chinensis HOM05D007183 ORTHO05D008829 2.1e-27 127.5 135 49.6
Peaxi162Scf00608g00919 Petunia axillaris HOM05D007183 ORTHO05D008829 1.4e-23 114.8 143 42.7
SMO343G0007 Selaginella moellendorffii HOM05D000667 ORTHO05D008829 6.3e-16 89.4 127 36.2
Pp3c22_21630 Physcomitrium patens HOM05D000667 ORTHO05D003843 4.0e-10 70.1 276 22.8
AagrBONN_evm.TU.Sc2ySwM_344.4698 Anthoceros agrestis HOM05D000667 ORTHO05D003095 5.7e-09 66.2 238 23.9
Sabra19G0114400 Salix brachista HOM05D007183 ORTHO05D008829 1.7e-08 64.7 47 63.8
Pp3c9_7690 Physcomitrium patens HOM05D001337 ORTHO05D001281 4.8e-08 63.2 265 26.4
Cfa006166 Carpinus fangiana HOM05D003852 ORTHO05D003095 3.1e-07 60.5 302 22.2
Haze_04684 Corylus avellana HOM05D003852 ORTHO05D003095 4.1e-07 60.1 302 22.2
Os02g0805400 Oryza sativa ssp. japonica HOM05D007183 ORTHO05D008829 1.2e-06 58.5 77 44.2
MD13G1136500 Malus domestica HOM05D003852 ORTHO05D003095 1.6e-06 58.2 112 26.8
SEGI_10708 Sequoiadendron giganteum HOM05D000667 ORTHO05D003095 1.6e-06 58.2 119 29.4
Zm00001eb426430 Zea mays HOM05D007183 ORTHO05D008829 1.6e-06 58.2 73 43.8
Hund09505 Selenicereus undatus HOM05D003852 ORTHO05D003095 3.5e-06 57.0 125 32.8
FAN17G1110 Fragaria x ananassa HOM05D000667 ORTHO05D003095 5.9e-06 56.2 112 27.7
RcHm_v2.0_Chr4g0428071 Rosa chinensis HOM05D000667 ORTHO05D003095 5.9e-06 56.2 124 27.4


User provided reference genes

Program Settings