Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038060.1 Olea europaea HOM05D008325 ORTHO05D010336 1.2e-56 223.0 121 100.0
Oeu009100.1 Olea europaea HOM05D007843 ORTHO05D003639 1.5e-30 136.3 110 66.4
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 1.1e-17 93.6 123 43.1
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 3.3e-17 92.0 124 44.4
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 9.5e-17 90.5 121 42.1
Duzib211G0526 Durio zibethinus HOM05D008325 ORTHO05D010336 8.1e-16 87.4 123 43.9
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 1.8e-15 86.3 127 45.7
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 3.1e-15 85.5 134 41.0
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 3.4e-14 82.0 131 42.7
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 4.4e-14 81.6 122 40.2
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 4.4e-14 81.6 122 40.2
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 7.5e-14 80.9 123 41.5
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 7.5e-14 80.9 110 41.8
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 1.3e-13 80.1 126 38.9
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.7e-13 78.6 131 39.7
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 1.9e-12 76.3 125 40.0
Ciclev10022863m.g Citrus clementina HOM05D008325 ORTHO05D010336 5.4e-12 74.7 141 39.0
Gohir.A08G039900 Gossypium hirsutum HOM05D008325 ORTHO05D010336 5.4e-12 74.7 121 39.7
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 7.1e-12 74.3 121 41.3
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 2.7e-11 72.4 123 38.2
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 2.7e-11 72.4 112 39.3
Thecc.01G320800 Theobroma cacao HOM05D008325 ORTHO05D010336 1.0e-10 70.5 126 37.3
Gohir.D08G050000 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.3e-10 70.1 121 40.5
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 3.0e-10 68.9 126 36.5
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 8.6e-10 67.4 101 35.6
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 2.5e-09 65.9 132 37.1
ClCG09G004800 Citrullus lanatus HOM05D023270 ORTHO05D010336 2.5e-09 65.9 132 40.9
Gohir.A11G107100 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.3e-09 65.5 54 53.7
Actinidia21366 Actinidia chinensis HOM05D008325 ORTHO05D010336 5.6e-09 64.7 97 40.2
Lj5g0017973 Lotus japonicus HOM05D008325 ORTHO05D010336 5.6e-09 64.7 125 32.0
Glyma.02G009500 Glycine max HOM05D008325 ORTHO05D010336 2.1e-08 62.8 133 37.6
Nn4g25441 Nelumbo nucifera HOM05D008325 ORTHO05D010336 2.1e-08 62.8 125 38.4
Cpa.g.sc1096.2 Carica papaya HOM05D008325 ORTHO05D010336 3.6e-08 62.0 64 43.8
Gohir.D11G112050 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.6e-08 62.0 54 51.9
Nn3g21852 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.1e-07 60.5 121 33.9
Nn4g25440 Nelumbo nucifera HOM05D008942 ORTHO05D009202 1.4e-07 60.1 80 41.2
CiPaw.07G033300 Carya illinoinensis HOM05D009264 ORTHO05D009202 1.8e-07 59.7 102 38.2
Gorai.007G120300 Gossypium raimondii HOM05D008325 ORTHO05D010336 4.0e-07 58.5 126 41.3
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 5.2e-07 58.2 106 40.6
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 5.2e-07 58.2 120 35.0
Glyma.19G219600 Glycine max HOM05D008325 ORTHO05D010336 6.8e-07 57.8 131 34.4
RcHm_v2.0_Chr3g0457951 Rosa chinensis HOM05D009264 ORTHO05D009202 2.6e-06 55.8 126 34.1
Manes.05G011600 Manihot esculenta HOM05D008325 ORTHO05D010336 3.4e-06 55.5 126 38.1
Glyma.03G222400 Glycine max HOM05D008325 ORTHO05D010336 4.4e-06 55.1 129 33.3
VMungo1383G3369 Vigna mungo HOM05D008325 ORTHO05D010336 4.4e-06 55.1 129 37.2
Actinidia35505 Actinidia chinensis HOM05D009264 ORTHO05D009202 7.6e-06 54.3 104 31.7
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 7.6e-06 54.3 120 34.2
RcHm_v2.0_Chr3g0486821 Rosa chinensis HOM05D008325 ORTHO05D010336 7.6e-06 54.3 143 33.6


User provided reference genes

Program Settings