Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 4.9e-82 307.8 156 100.0
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 4.9e-42 174.9 202 50.5
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.9e-41 172.9 194 54.1
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 5.5e-41 171.4 194 54.1
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 7.9e-40 167.5 203 50.7
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 1.8e-39 166.4 199 51.8
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.9e-39 165.2 203 49.3
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 5.1e-39 164.9 205 51.2
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.1e-39 164.9 193 50.3
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 8.7e-39 164.1 198 50.5
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 8.7e-39 164.1 196 51.0
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 8.7e-39 164.1 205 50.7
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.1e-38 163.7 198 50.0
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 7.4e-38 161.0 195 49.7
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.3e-37 160.2 198 49.0
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.3e-37 160.2 184 52.2
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 2.2e-37 159.5 205 50.2
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 4.8e-37 158.3 199 51.3
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 2.4e-36 156.0 194 49.5
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.1e-36 155.2 218 46.8
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.1e-36 155.2 218 45.9
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 9.0e-36 154.1 180 50.6
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.2e-35 153.7 192 51.0
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 4.5e-35 151.8 203 48.8
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 5.9e-35 151.4 197 46.7
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.0e-34 150.6 205 49.3
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.3e-34 150.2 190 45.8
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 2.2e-34 149.4 194 46.9
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 2.9e-34 149.1 199 46.7
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 5.0e-34 148.3 190 45.3
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 5.0e-34 148.3 193 46.1
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 6.5e-34 147.9 186 46.2
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 5.5e-33 144.8 200 45.5
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.2e-32 143.7 186 45.7
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 2.1e-32 142.9 156 49.4
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 3.6e-32 142.1 199 46.2
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 6.1e-32 141.4 147 55.1
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 6.1e-32 141.4 182 50.0
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 6.1e-32 141.4 156 49.4
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.0e-31 140.6 181 47.5
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.0e-31 140.6 212 45.3
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.4e-31 140.2 193 47.2
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.3e-31 139.4 176 46.6
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 3.0e-31 139.0 156 51.9
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.9e-31 138.7 222 40.5
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 8.8e-31 137.5 187 45.5
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 8.8e-31 137.5 212 47.6
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 2.5e-30 136.0 160 48.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.3e-30 135.2 198 44.4
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 4.3e-30 135.2 196 43.9
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 5.7e-30 134.8 195 44.1
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 7.4e-30 134.4 222 39.6
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 7.4e-30 134.4 200 42.5
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 9.7e-30 134.0 175 46.3
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 9.7e-30 134.0 149 51.0
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.3e-29 133.7 146 51.4
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.3e-29 133.7 172 47.1
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.3e-29 133.7 172 47.1
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.7e-29 133.3 196 43.9
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 1.7e-29 133.3 145 53.1
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 3.7e-29 132.1 200 43.5
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 1.1e-28 130.6 188 45.2
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.1e-28 130.6 148 51.4
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.8e-28 129.8 199 43.7
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 2.4e-28 129.4 160 51.2
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 2.4e-28 129.4 157 50.3
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.1e-28 129.0 160 51.9
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 6.9e-28 127.9 198 42.9
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 2.0e-27 126.3 195 41.5
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 2.6e-27 125.9 197 43.1
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 2.6e-27 125.9 166 47.0
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 3.4e-27 125.6 195 41.5
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 3.4e-27 125.6 172 44.8
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 4.5e-27 125.2 196 40.8
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 4.5e-27 125.2 195 41.5
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.5e-27 125.2 118 59.3
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.0e-26 124.0 162 45.1
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.7e-26 123.2 211 40.8
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.9e-26 122.5 196 40.3
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.9e-26 122.5 196 40.3
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 6.5e-26 121.3 203 39.4
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 6.5e-26 121.3 172 44.8
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 1.1e-25 120.6 133 51.9
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 5.5e-25 118.2 197 41.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 9.4e-25 117.5 142 49.3
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.2e-24 117.1 230 37.8
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 3.9e-23 112.1 101 60.4
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 1.1e-22 110.5 130 49.2
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 7.4e-22 107.8 132 47.7
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.7e-21 106.7 135 47.4
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 4.1e-20 102.1 140 47.9
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 4.5e-19 98.6 128 44.5
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.5e-18 94.7 60 76.7
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 9.4e-17 90.9 243 36.6
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 1.2e-16 90.5 53 81.1
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 4.7e-16 88.6 171 38.0
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.8e-15 86.7 100 50.0
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 5.2e-15 85.1 121 43.0
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.7e-13 80.1 112 46.4
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.1e-12 77.4 102 49.0
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.6e-11 73.6 106 45.3
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.8e-10 68.9 238 29.4
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.1e-09 67.4 146 32.9
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.1e-08 63.2 104 41.3
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 2.7e-08 62.8 36 80.6
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 2.7e-08 62.8 36 80.6
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 2.7e-08 62.8 140 32.9
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.4e-07 60.5 97 44.3
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 4.4e-06 55.5 73 49.3
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 7.5e-06 54.7 108 36.1


User provided reference genes

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