Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 2.1e-61 238.8 116 100.0
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 7.1e-54 213.8 115 87.8
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.1e-51 206.5 115 85.2
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 5.3e-49 197.6 111 82.9
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 3.8e-47 191.4 99 91.9
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 5.0e-47 191.0 111 81.1
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 5.0e-47 191.0 111 81.1
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 8.5e-47 190.3 113 81.4
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 2.5e-46 188.7 115 75.7
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.2e-46 187.2 135 68.1
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 9.4e-46 186.8 111 79.3
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 2.1e-45 185.7 111 78.4
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.6e-45 184.9 115 73.9
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 4.6e-45 184.5 114 76.3
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 4.6e-45 184.5 116 76.7
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 4.6e-45 184.5 113 76.1
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 6.1e-45 184.1 114 76.3
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.0e-44 183.3 113 75.2
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 1.4e-44 183.0 100 87.0
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.4e-44 183.0 100 86.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 2.3e-44 182.2 100 86.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 3.0e-44 181.8 114 76.3
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 3.9e-44 181.4 100 85.0
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 5.1e-44 181.0 115 74.8
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 6.7e-44 180.6 112 75.0
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 8.8e-44 180.3 113 74.3
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.5e-43 179.5 111 76.6
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.0e-43 179.1 99 84.8
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 3.3e-43 178.3 100 84.0
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.7e-43 177.6 105 79.0
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 2.2e-42 175.6 115 72.2
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 3.7e-42 174.9 100 84.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 3.7e-42 174.9 100 84.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 4.8e-42 174.5 100 83.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 8.2e-42 173.7 111 72.1
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 8.2e-42 173.7 100 83.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 1.8e-41 172.6 116 71.6
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 3.1e-41 171.8 106 75.5
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 4.1e-41 171.4 111 75.7
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 4.1e-41 171.4 122 70.5
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 9.1e-41 170.2 100 82.0
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 9.1e-41 170.2 115 70.4
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 1.2e-40 169.9 115 68.7
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 1.2e-40 169.9 115 68.7
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.5e-40 169.5 115 67.8
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.0e-40 169.1 115 67.8
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.0e-40 169.1 112 71.4
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 2.0e-40 169.1 111 71.2
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 4.5e-40 167.9 115 67.8
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 5.9e-40 167.5 100 78.0
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 5.9e-40 167.5 105 74.3
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 5.9e-40 167.5 111 69.4
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 5.9e-40 167.5 114 68.4
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.9e-40 167.5 89 85.4
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 1.3e-39 166.4 115 68.7
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 1.3e-39 166.4 95 77.9
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.7e-39 166.0 111 72.1
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.7e-39 166.0 111 70.3
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 1.7e-39 166.0 115 68.7
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.2e-39 165.6 127 66.9
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 3.8e-39 164.9 111 70.3
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 5.0e-39 164.5 111 69.4
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 5.0e-39 164.5 109 68.8
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 5.0e-39 164.5 109 68.8
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 5.0e-39 164.5 109 68.8
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 5.0e-39 164.5 113 67.3
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 8.5e-39 163.7 115 67.8
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.9e-38 162.5 103 69.9
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 4.2e-38 161.4 111 66.7
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 9.4e-38 160.2 98 74.5
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 1.2e-37 159.8 98 72.4
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.6e-37 159.5 100 76.0
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.1e-37 159.1 114 63.2
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.1e-37 159.1 112 63.4
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.7e-37 158.7 91 79.1
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.6e-37 158.3 109 73.4
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 3.6e-37 158.3 103 68.9
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 3.6e-37 158.3 89 79.8
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 4.7e-37 157.9 122 63.9
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 4.7e-37 157.9 100 76.0
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.1e-37 157.5 108 73.1
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.0e-36 156.8 107 70.1
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 1.4e-36 156.4 113 64.6
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.4e-36 156.4 113 64.6
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.3e-36 155.6 113 64.6
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.3e-36 155.6 113 64.6
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.3e-36 155.6 100 74.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.0e-36 155.2 100 74.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 3.0e-36 155.2 118 67.8
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.9e-36 154.8 113 63.7
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 3.9e-36 154.8 116 65.5
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 3.9e-36 154.8 100 75.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 6.7e-36 154.1 98 74.5
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 2.6e-35 152.1 106 65.1
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 2.6e-35 152.1 91 76.9
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.4e-35 151.4 103 68.9
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 9.7e-35 150.2 99 70.7
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.3e-34 149.8 104 67.3
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.1e-33 146.7 102 67.6
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.4e-33 146.4 100 68.0
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.4e-33 146.4 111 63.1
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 4.1e-33 144.8 100 69.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 4.1e-33 144.8 96 70.8
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 7.0e-33 144.1 100 68.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.2e-32 143.3 88 77.3
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.0e-32 142.5 100 67.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 5.9e-32 141.0 99 66.7
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.3e-31 139.8 97 69.1
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 2.2e-31 139.0 100 68.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.9e-31 138.7 100 65.0
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 8.5e-31 137.1 84 78.6
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.2e-29 133.3 100 64.0
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 2.7e-29 132.1 100 62.0
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 3.0e-28 128.6 89 67.4
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 5.7e-27 124.4 75 80.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 7.4e-27 124.0 92 63.0
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.4e-25 119.8 106 56.6
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 9.1e-25 117.1 88 60.2
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 2.9e-23 112.1 99 55.6
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.1e-22 110.2 70 71.4
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 5.5e-22 107.8 101 51.5
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 2.0e-19 99.4 75 62.7
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 4.4e-19 98.2 63 65.1
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 4.8e-18 94.7 74 60.8
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.4e-17 93.2 52 82.7
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 2.4e-17 92.4 61 63.9
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 5.5e-14 81.3 56 66.1
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 4.1e-09 65.1 34 85.3
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 5.4e-09 64.7 108 38.0
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.0e-08 62.8 50 62.0
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.0e-08 62.8 71 43.7
CiPaw.16G114400 Carya illinoinensis HOM05D006119 ORTHO05D007641 5.0e-07 58.2 41 65.9


User provided reference genes

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