Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037989.1 Olea europaea HOM05D004557 ORTHO05D005258 1.3e-102 376.3 184 100.0
Dinv06254 Davidia involucrata HOM05D004557 ORTHO05D005258 1.4e-40 170.2 161 55.9
Dinv15528 Davidia involucrata HOM05D004557 ORTHO05D005258 1.4e-40 170.2 161 55.9
Dinv29489 Davidia involucrata HOM05D004557 ORTHO05D005258 2.1e-39 166.4 161 54.7
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 5.1e-38 161.8 179 49.2
SGA_v2.0_scaffold98G29377 Striga asiatica HOM05D004557 ORTHO05D005258 2.5e-37 159.5 162 51.9
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 2.4e-35 152.9 163 50.9
Nitab4.5_0004953g0040 Nicotiana tabacum HOM05D002542 ORTHO05D010145 1.7e-33 146.7 156 51.9
Actinidia25701 Actinidia chinensis HOM05D004557 ORTHO05D005258 1.1e-32 144.1 162 51.2
HanXRQChr09g0248091 Helianthus annuus HOM05D004557 ORTHO05D005258 1.2e-31 140.6 138 50.0
Lj7A235T21 Lonicera japonica HOM05D004557 ORTHO05D005258 7.9e-31 137.9 119 57.1
SGA_v2.0_scaffold20G09180 Striga asiatica HOM05D004557 ORTHO05D005258 2.3e-30 136.3 154 47.4
Lsat_1_v5_gn_7_60080 Lactuca sativa HOM05D004557 ORTHO05D005258 3.9e-30 135.6 144 47.9
SGA_v2.0_scaffold64G21858 Striga asiatica HOM05D000448 ORTHO05D000291 1.9e-29 133.3 104 53.8
CSS0012791 Camellia sinensis var. sinensis HOM05D004557 ORTHO05D005258 3.3e-29 132.5 133 54.1
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 4.8e-28 128.6 159 45.9
unitig_26.g8849 Utricularia gibba HOM05D004557 ORTHO05D005258 2.4e-27 126.3 145 43.4
CAN.G1245.2 Capsicum annuum HOM05D004557 ORTHO05D005258 3.1e-27 125.9 144 45.8
ClCG08G009910 Citrullus lanatus HOM05D004557 ORTHO05D005258 3.1e-27 125.9 148 46.6
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 4.1e-27 125.6 138 48.6
Cpa.g.sc126.43 Carica papaya HOM05D004557 ORTHO05D005258 6.9e-27 124.8 176 43.2
Cc08_g01350 Coffea canephora HOM05D004557 ORTHO05D005258 6.9e-27 124.8 124 50.0
MD15G1052600 Malus domestica HOM05D004557 ORTHO05D005258 9.0e-27 124.4 118 52.5
Rhsim01G0109000 Rhododendron simsii HOM05D004557 ORTHO05D005258 2.6e-26 122.9 129 54.3
Peaxi162Scf00809g00213 Petunia axillaris HOM05D002542 ORTHO05D010145 3.4e-26 122.5 179 41.3
Nitab4.5_0007748g0010 Nicotiana tabacum HOM05D002542 ORTHO05D010145 4.5e-26 122.1 132 49.2
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 7.7e-26 121.3 147 45.6
SalBow5G2684 Salvia bowleyana HOM05D004557 ORTHO05D005258 1.0e-25 120.9 150 47.3
TAR383G0817 Trochodendron aralioides HOM05D004557 ORTHO05D005258 2.9e-25 119.4 148 43.9
Atru.chr7.1871 Acer truncatum HOM05D004557 ORTHO05D005258 3.8e-25 119.0 101 59.4
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 3.8e-25 119.0 108 52.8
Cfa018005 Carpinus fangiana HOM05D004557 ORTHO05D005258 5.0e-25 118.6 181 42.0
MELO3C011480.2 Cucumis melo HOM05D004557 ORTHO05D005258 6.5e-25 118.2 149 44.3
Rhsim09G0050500 Rhododendron simsii HOM05D004557 ORTHO05D005258 8.5e-25 117.9 153 47.1
TWI34G1499 Tripterygium wilfordii HOM05D004557 ORTHO05D005258 8.5e-25 117.9 147 44.9
Potri.006G223100 Populus trichocarpa HOM05D004557 ORTHO05D005258 1.1e-24 117.5 150 44.0
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.4e-24 117.1 134 48.5
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.4e-24 117.1 134 48.5
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.4e-24 117.1 134 48.5
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 1.4e-24 117.1 150 44.0
Aqoxy7G01097 Aquilegia oxysepala HOM05D004557 ORTHO05D005258 4.2e-24 115.5 166 39.8
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.5e-24 115.2 125 48.8
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 7.2e-24 114.8 166 41.0
COL.COLO4_37167 Corchorus olitorius HOM05D004557 ORTHO05D005258 1.6e-23 113.6 93 57.0
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 3.6e-23 112.5 136 46.3
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 3.6e-23 112.5 119 45.4
Prupe.1G406500 Prunus persica HOM05D004557 ORTHO05D005258 1.8e-22 110.2 164 41.5
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 3.0e-22 109.4 163 38.7
Manes.03G052300 Manihot esculenta HOM05D004557 ORTHO05D005258 3.9e-22 109.0 145 43.4
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 5.1e-22 108.6 118 46.6
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 1.1e-21 107.5 156 39.1
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 3.3e-21 105.9 153 42.5
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 4.3e-21 105.5 151 43.0
Nn6g35588 Nelumbo nucifera HOM05D004557 ORTHO05D005258 9.7e-21 104.4 100 49.0
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 1.3e-20 104.0 147 42.2
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 3.7e-20 102.4 104 50.0
DCAR_004388 Daucus carota HOM05D004557 ORTHO05D005258 4.8e-20 102.1 143 40.6
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 1.4e-19 100.5 172 36.6
PSO210G7071 Papaver somniferum HOM05D004557 ORTHO05D005258 1.4e-19 100.5 124 43.5
DCAR_000813 Daucus carota HOM05D004557 ORTHO05D005258 1.8e-19 100.1 95 48.4
FAN06G3367 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.8e-19 100.1 140 42.1
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 3.1e-19 99.4 142 36.6
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 5.3e-19 98.6 121 40.5
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 1.5e-18 97.1 143 39.9
Ca_15841_v3 Cicer arietinum L. HOM05D002542 ORTHO05D010145 2.0e-18 96.7 103 42.7
FAN13G2684 Fragaria x ananassa HOM05D004557 ORTHO05D005258 2.0e-18 96.7 143 41.3
PSO388G0001 Papaver somniferum HOM05D004557 ORTHO05D005258 2.0e-18 96.7 148 39.9
FAN08G0395 Fragaria x ananassa HOM05D004557 ORTHO05D005258 3.4e-18 95.9 141 41.1
FvH4_5g32040 Fragaria vesca HOM05D004557 ORTHO05D005258 1.3e-17 94.0 141 41.1
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 1.7e-17 93.6 136 35.3
FAN18G0835 Fragaria x ananassa HOM05D004557 ORTHO05D005258 2.9e-17 92.8 141 41.8
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 2.9e-17 92.8 125 38.4
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea HOM05D004557 ORTHO05D005258 5.0e-17 92.0 119 43.7
DCAR_004389 Daucus carota HOM05D004557 ORTHO05D005258 8.5e-17 91.3 142 37.3
FAN04G2671 Fragaria x ananassa HOM05D004557 ORTHO05D005258 8.5e-17 91.3 141 40.4
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 1.4e-16 90.5 119 43.7
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 1.4e-16 90.5 148 36.5
Solyc08g062200.3 Solanum lycopersicum HOM05D002542 ORTHO05D010145 3.2e-16 89.4 121 42.1
Gohir.D08G268633 Gossypium hirsutum HOM05D004557 ORTHO05D005258 4.2e-16 89.0 96 47.9
vmacro20759 Vaccinium macrocarpon HOM05D004557 ORTHO05D005258 4.2e-16 89.0 152 38.2
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 7.2e-16 88.2 143 34.3
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 7.2e-16 88.2 113 40.7
PGSC0003DMG400021751 Solanum tuberosum HOM05D004557 ORTHO05D005258 1.6e-15 87.0 108 44.4
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 2.1e-15 86.7 99 42.4
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 3.6e-15 85.9 143 33.6
Phvul.009G080800 Phaseolus vulgaris HOM05D004557 ORTHO05D005258 3.6e-15 85.9 116 37.1
Sopen08g017790 Solanum pennellii HOM05D004557 ORTHO05D005258 3.6e-15 85.9 143 39.2
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 7.9e-15 84.7 103 37.9
Eucgr.I02597 Eucalyptus grandis HOM05D004557 ORTHO05D005258 3.9e-14 82.4 102 46.1
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 8.8e-14 81.3 133 34.6
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 7.4e-13 78.2 127 43.3
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 1.3e-12 77.4 105 36.2
Glyma.20G016100 Glycine max HOM05D004557 ORTHO05D005258 2.8e-12 76.3 145 31.0
Glyma.04G054800 Glycine max HOM05D004557 ORTHO05D005258 6.3e-12 75.1 118 35.6
CDE05G1912 Ceratophyllum demersum HOM05D004557 ORTHO05D005258 8.2e-12 74.7 135 33.3
FAN01G3115 Fragaria x ananassa HOM05D018527 ORTHO05D005258 1.1e-11 74.3 123 34.1
FAN10G3179 Fragaria x ananassa HOM05D018527 ORTHO05D005258 2.4e-11 73.2 123 33.3
Thecc.05G143900 Theobroma cacao HOM05D004557 ORTHO05D005258 1.2e-10 70.9 122 32.8
Thecc.09G060300 Theobroma cacao HOM05D004557 ORTHO05D005258 1.2e-10 70.9 171 30.4
Eucgr.J00345 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.0e-10 70.1 84 44.0
Eucgr.L01064 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.0e-10 70.1 84 44.0
Thecc.09G060800 Theobroma cacao HOM05D004557 ORTHO05D005258 5.9e-10 68.6 97 39.2
Actinidia29314 Actinidia chinensis HOM05D004557 ORTHO05D005258 7.7e-10 68.2 67 52.2
Thhalv10013525m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 6.5e-09 65.1 94 37.2
Sp6g28040 Schrenkiella parvula HOM05D004557 ORTHO05D005258 8.5e-09 64.7 176 24.4
AUR62009097 Chenopodium quinoa HOM05D004557 ORTHO05D005258 1.9e-08 63.5 79 43.0
Medtr3g465110 Medicago truncatula HOM05D004557 ORTHO05D005258 1.9e-08 63.5 121 33.9
A10p22940 Brassica napus HOM05D004557 ORTHO05D005258 5.5e-08 62.0 107 32.7
BraA10t44362Z Brassica rapa HOM05D004557 ORTHO05D005258 5.5e-08 62.0 107 32.7
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 7.2e-08 61.6 105 37.1
HPP92_024782 Vanilla planifolia HOM05D004557 ORTHO05D005258 1.2e-07 60.8 96 36.5
Zm00001eb133740 Zea mays HOM05D004557 ORTHO05D005258 1.2e-07 60.8 108 34.3
C09p60890 Brassica napus HOM05D004557 ORTHO05D005258 2.7e-07 59.7 92 34.8
BolC9t58932H Brassica oleracea HOM05D004557 ORTHO05D005258 2.7e-07 59.7 92 34.8
Pp3c24_6460 Physcomitrium patens HOM05D004557 ORTHO05D005258 1.0e-06 57.8 89 38.2
Aa31LG11G13510 Aethionema arabicum HOM05D004557 ORTHO05D005258 1.8e-06 57.0 156 30.8
unitig_750.g28413 Utricularia gibba HOM05D004557 ORTHO05D005258 3.0e-06 56.2 73 41.1
Mapoly0049s0118 Marchantia polymorpha HOM05D004557 ORTHO05D005258 5.2e-06 55.5 88 38.6
CsaV3_4G035940 Cucumis sativus L. HOM05D004557 ORTHO05D005258 8.8e-06 54.7 57 47.4


User provided reference genes

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