Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 4.6e-86 321.2 167 100.0
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 5.4e-71 271.2 169 81.7
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 4.6e-70 268.1 167 80.8
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 4.3e-68 261.5 167 79.6
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 9.6e-68 260.4 167 78.4
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 1.2e-65 253.4 173 75.1
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 2.6e-65 252.3 167 79.0
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 5.8e-65 251.1 175 75.4
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 9.9e-65 250.4 176 74.4
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 3.8e-64 248.4 176 73.9
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 3.8e-64 248.4 174 74.7
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 4.9e-64 248.1 174 74.1
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 8.4e-64 247.3 174 73.6
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 1.4e-63 246.5 176 75.0
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.9e-63 246.1 174 74.7
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 2.4e-63 245.7 177 72.9
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 2.4e-63 245.7 167 76.0
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 3.2e-63 245.4 175 73.7
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 7.1e-63 244.2 173 73.4
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.2e-62 243.4 175 75.4
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 1.6e-62 243.0 173 72.8
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 2.1e-62 242.7 174 74.1
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 3.5e-62 241.9 172 72.1
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.5e-62 241.9 175 74.9
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 4.6e-62 241.5 170 74.7
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 4.6e-62 241.5 172 72.1
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 7.9e-62 240.7 172 71.5
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 7.9e-62 240.7 174 73.6
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.8e-61 239.6 174 74.1
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 1.8e-61 239.6 168 73.8
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 3.9e-61 238.4 172 72.1
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 5.1e-61 238.0 176 72.2
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 6.7e-61 237.7 173 73.4
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 6.7e-61 237.7 173 71.1
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 8.7e-61 237.3 172 71.5
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 1.1e-60 236.9 171 71.9
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 1.5e-60 236.5 173 71.1
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 1.5e-60 236.5 171 70.2
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 1.9e-60 236.1 177 72.3
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 1.9e-60 236.1 177 72.3
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 2.5e-60 235.7 171 73.1
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 4.3e-60 235.0 182 72.0
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 7.4e-60 234.2 172 72.1
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 9.6e-60 233.8 171 71.9
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.3e-59 233.4 173 72.3
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 1.6e-59 233.0 173 72.8
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 3.7e-59 231.9 172 70.3
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 4.8e-59 231.5 172 71.5
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 1.4e-58 229.9 174 70.7
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 1.4e-58 229.9 176 70.5
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 1.8e-58 229.6 174 68.4
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 2.4e-58 229.2 170 71.2
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 5.3e-58 228.0 175 70.9
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 5.3e-58 228.0 170 71.8
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 6.9e-58 227.6 167 69.5
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 6.9e-58 227.6 167 69.5
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 3.4e-57 225.3 173 71.7
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 9.9e-57 223.8 172 69.2
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 9.9e-57 223.8 171 69.6
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 2.9e-56 222.2 172 69.2
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 6.4e-56 221.1 171 69.0
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 6.4e-56 221.1 176 68.2
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 8.4e-56 220.7 168 70.2
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 1.1e-55 220.3 178 68.0
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 1.1e-55 220.3 171 67.8
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 1.9e-55 219.5 168 70.2
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 2.4e-55 219.2 171 69.0
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 3.2e-55 218.8 171 71.3
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 3.2e-55 218.8 174 65.5
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 5.5e-55 218.0 167 69.5
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 7.1e-55 217.6 171 67.8
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 7.1e-55 217.6 172 67.4
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 1.6e-54 216.5 181 66.3
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 2.1e-54 216.1 171 67.8
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 2.7e-54 215.7 174 69.0
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 3.5e-54 215.3 170 65.9
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 6.0e-54 214.5 170 67.1
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 6.0e-54 214.5 172 67.4
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 7.9e-54 214.2 149 72.5
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 7.9e-54 214.2 173 67.6
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 1.0e-53 213.8 174 68.4
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 1.8e-53 213.0 172 66.9
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 1.8e-53 213.0 171 67.3
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 1.8e-53 213.0 171 67.3
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 5.1e-53 211.5 170 66.5
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 8.7e-53 210.7 171 66.1
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 8.7e-53 210.7 172 66.3
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 1.1e-52 210.3 172 66.3
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 1.1e-52 210.3 171 66.1
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 1.1e-52 210.3 172 67.4
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 1.1e-52 210.3 172 67.4
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 1.5e-52 209.9 168 67.9
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 1.5e-52 209.9 176 67.0
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 2.5e-52 209.1 178 61.8
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 5.6e-52 208.0 171 66.1
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 7.4e-52 207.6 173 65.3
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 7.4e-52 207.6 167 67.7
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 9.6e-52 207.2 170 65.3
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 9.6e-52 207.2 170 65.3
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 1.6e-51 206.5 170 65.3
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 1.6e-51 206.5 170 66.5
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 2.1e-51 206.1 181 63.0
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 3.7e-51 205.3 176 65.3
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 1.4e-50 203.4 171 64.3
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 5.3e-50 201.4 167 61.7
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 5.3e-50 201.4 167 61.1
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 6.9e-50 201.1 172 64.0
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 9.0e-50 200.7 172 66.3
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 1.2e-49 200.3 172 64.0
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 8.4e-48 194.1 167 60.5
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 7.1e-47 191.0 174 60.9
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 7.9e-46 187.6 127 74.0
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 1.8e-45 186.4 175 61.1
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 2.8e-43 179.1 144 68.8
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 8.2e-43 177.6 149 60.4
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 8.2e-43 177.6 154 62.3
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 4.1e-42 175.3 170 58.8
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 4.1e-42 175.3 170 58.8
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 9.0e-42 174.1 147 60.5
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 2.0e-41 172.9 145 67.6
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 4.2e-39 165.2 137 60.6
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 5.5e-39 164.9 145 66.9
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 2.8e-35 152.5 145 64.1
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 4.8e-35 151.8 141 62.4
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 1.5e-33 146.7 141 61.0
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 1.9e-31 139.8 82 74.4
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 9.4e-31 137.5 128 55.5
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 1.4e-29 133.7 74 86.5
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 3.9e-29 132.1 74 85.1
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 5.1e-29 131.7 72 87.5
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 5.1e-29 131.7 128 61.7
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 6.7e-29 131.3 74 85.1
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.3e-24 117.1 170 48.8
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 1.6e-22 110.2 162 42.0
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 8.0e-22 107.8 102 61.8
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 2.6e-20 102.8 74 68.9
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 2.6e-20 102.8 106 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 2.8e-19 99.4 82 62.2
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 1.3e-16 90.5 110 54.5
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 2.1e-14 83.2 96 49.0
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 8.0e-14 81.3 88 48.9
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 2.3e-13 79.7 104 44.2
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 1.5e-12 77.0 113 47.8
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.8e-10 70.1 108 49.1
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 1.0e-08 64.3 98 44.9
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 6.5e-08 61.6 30 86.7


User provided reference genes

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