Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 2.7e-163 578.6 281 100.0
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 1.1e-129 466.8 277 84.1
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 5.1e-114 414.8 274 74.8
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 4.8e-112 408.3 265 74.7
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 1.1e-108 397.1 260 71.9
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.1e-108 397.1 274 70.1
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 1.4e-108 396.7 276 69.6
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 9.3e-108 394.0 278 69.4
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 2.1e-107 392.9 260 72.7
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 2.1e-107 392.9 258 73.6
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 3.6e-107 392.1 271 70.8
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 1.8e-106 389.8 268 70.5
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 3.0e-106 389.0 274 68.2
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 3.9e-106 388.7 260 70.4
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 5.1e-106 388.3 265 70.6
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 5.7e-105 384.8 267 69.7
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 5.7e-105 384.8 291 64.9
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 7.4e-105 384.4 260 70.0
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.3e-104 383.6 269 68.8
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 2.2e-104 382.9 275 68.0
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 2.8e-104 382.5 270 68.9
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 6.3e-104 381.3 271 69.4
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 8.2e-104 380.9 258 69.4
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 1.1e-103 380.6 274 67.2
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 1.8e-103 379.8 262 70.6
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.4e-103 379.4 274 66.8
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 1.2e-102 377.1 256 71.5
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.2e-102 377.1 270 68.5
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.6e-102 375.9 274 66.4
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.4e-102 375.6 276 66.7
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.9e-102 374.8 276 66.3
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.0e-101 374.0 270 67.8
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 2.9e-101 372.5 260 68.8
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 3.8e-101 372.1 259 70.3
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.5e-101 370.9 276 65.9
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.5e-101 370.9 276 65.6
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 5.5e-100 368.2 260 65.4
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 5.5e-100 368.2 276 65.6
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 9.4e-100 367.5 260 69.2
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 1.2e-99 367.1 260 66.9
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 1.6e-99 366.7 268 66.4
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 2.1e-99 366.3 273 65.6
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 2.1e-99 366.3 260 66.9
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 1.4e-98 363.6 313 59.4
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.4e-98 363.6 230 74.3
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 1.8e-98 363.2 257 69.6
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 3.0e-98 362.5 273 66.7
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 5.1e-98 361.7 269 63.9
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 6.7e-98 361.3 264 66.3
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 8.8e-98 360.9 257 69.3
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 1.1e-97 360.5 282 63.5
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 1.5e-97 360.1 258 67.4
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 2.0e-97 359.8 293 61.8
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 3.3e-97 359.0 260 66.5
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 1.7e-96 356.7 264 65.5
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 2.8e-96 355.9 264 65.2
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 2.4e-95 352.8 260 65.4
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.1e-95 352.1 267 61.8
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 4.1e-95 352.1 268 63.8
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 5.3e-95 351.7 261 63.6
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 6.9e-95 351.3 266 64.3
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 2.0e-94 349.7 271 62.4
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 4.5e-94 348.6 264 62.9
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 1.3e-93 347.1 271 62.4
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.9e-93 345.9 277 59.9
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 2.9e-93 345.9 259 61.4
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 6.5e-93 344.7 256 64.5
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 1.9e-92 343.2 258 63.6
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 2.5e-92 342.8 260 62.7
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 7.2e-92 341.3 257 63.4
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 9.4e-92 340.9 260 62.3
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 1.2e-91 340.5 260 60.8
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 1.2e-91 340.5 262 61.5
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 1.6e-91 340.1 255 63.5
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 2.1e-91 339.7 255 63.9
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 3.6e-91 339.0 256 62.9
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 3.6e-91 339.0 244 66.8
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 3.6e-91 339.0 259 60.6
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 4.7e-91 338.6 273 60.8
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 4.7e-91 338.6 233 68.7
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 7.9e-91 337.8 256 62.9
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 4.4e-89 332.0 260 59.6
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 9.7e-89 330.9 256 65.2
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.7e-88 330.1 259 60.2
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 2.2e-88 329.7 260 59.2
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 4.8e-88 328.6 260 58.8
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 1.1e-87 327.4 260 58.8
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.1e-87 327.4 259 60.2
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.1e-87 327.4 260 60.4
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 2.4e-87 326.2 260 60.0
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 5.3e-87 325.1 255 59.2
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 7.0e-87 324.7 259 59.1
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.6e-86 323.6 255 59.2
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.6e-86 323.6 255 59.2
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 3.5e-86 322.4 260 57.7
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 3.5e-86 322.4 258 60.9
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 4.5e-86 322.0 255 58.8
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 4.5e-86 322.0 255 58.8
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 4.5e-86 322.0 260 56.2
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 5.9e-86 321.6 259 58.3
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.3e-85 320.5 259 58.3
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 2.2e-85 319.7 260 58.5
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 2.2e-85 319.7 260 57.7
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 3.8e-85 318.9 259 58.3
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.1e-84 317.4 260 58.8
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.5e-84 317.0 260 56.9
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 7.2e-84 314.7 264 58.7
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 9.7e-81 304.3 211 67.8
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 1.7e-80 303.5 211 67.3
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 1.8e-79 300.1 211 67.3
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 3.5e-78 295.8 283 51.9
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 2.2e-77 293.1 195 72.3
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 2.5e-76 289.7 270 54.4
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 2.7e-75 286.2 180 74.4
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 6.8e-74 281.6 238 55.0
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 7.5e-73 278.1 194 66.0
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 3.5e-70 269.2 239 54.0
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.0e-69 267.7 260 51.5
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 2.9e-69 266.2 259 51.7
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 6.1e-67 258.5 253 53.0
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 4.0e-66 255.8 257 51.4
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 5.7e-65 251.9 193 60.6
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 7.5e-65 251.5 195 59.0
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.6e-62 243.8 233 48.5
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.2e-59 234.2 182 59.9
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 3.4e-57 226.1 255 46.7
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 2.9e-56 223.0 153 66.7
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 7.3e-52 208.4 204 48.0
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 4.7e-51 205.7 142 72.5
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 1.4e-50 204.1 138 66.7
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 1.4e-50 204.1 210 48.6
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.8e-50 203.8 271 45.8
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.9e-48 196.4 308 40.3
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.4e-47 194.1 138 70.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 3.3e-44 183.0 194 52.6
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 4.4e-41 172.6 235 39.1
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 4.4e-41 172.6 138 57.2
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 5.8e-41 172.2 129 57.4
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.1e-39 167.9 124 66.9
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 1.3e-37 161.0 114 63.2
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 1.7e-37 160.6 272 35.7
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.3e-28 129.4 110 55.5
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 9.6e-28 128.3 79 74.7
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 1.4e-23 114.4 64 79.7
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.4e-18 97.1 117 41.9
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 7.6e-17 92.0 54 79.6
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 1.9e-12 77.4 68 52.9


User provided reference genes

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