Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037750.1 Olea europaea HOM05D000520 ORTHO05D000399 2.8e-86 322.0 172 100.0
Lj6C675T3 Lonicera japonica HOM05D000520 ORTHO05D000399 5.9e-28 128.3 225 37.8
SalBow2G0691 Salvia bowleyana HOM05D000520 ORTHO05D000399 5.9e-28 128.3 257 40.5
Migut.G00167 Erythranthe guttata HOM05D000520 ORTHO05D000399 2.5e-26 122.9 270 38.1
Migut.G00271 Erythranthe guttata HOM05D000520 ORTHO05D000399 5.5e-26 121.7 266 36.8
MSTRG.10091 Avicennia marina HOM05D000520 ORTHO05D000399 5.1e-24 115.2 262 34.7
Cc03_g02010 Coffea canephora HOM05D000520 ORTHO05D000399 1.1e-23 114.0 274 33.6
Dinv29767 Davidia involucrata HOM05D000520 ORTHO05D000399 1.1e-21 107.5 265 32.5
ECA240G3178 Erigeron canadensis HOM05D000520 ORTHO05D000399 2.0e-20 103.2 234 39.3
DCAR_024565 Daucus carota HOM05D000520 ORTHO05D000399 4.5e-20 102.1 248 34.7
Rhsim04G0221200 Rhododendron simsii HOM05D000520 ORTHO05D000399 2.9e-19 99.4 233 33.0
Peaxi162Scf00498g00727 Petunia axillaris HOM05D000520 ORTHO05D000399 5.0e-19 98.6 256 34.8
CSS0049482 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 8.5e-19 97.8 205 41.0
MSTRG.3922 Avicennia marina HOM05D000520 ORTHO05D000399 1.1e-18 97.4 256 34.8
QL06p008798 Quercus lobata HOM05D000520 ORTHO05D000399 3.2e-18 95.9 246 36.2
Nitab4.5_0005076g0030 Nicotiana tabacum HOM05D000520 ORTHO05D000399 7.2e-18 94.7 265 34.0
HanXRQChr13g0411351 Helianthus annuus HOM05D000520 ORTHO05D000399 2.7e-17 92.8 240 30.4
Hma1.2p1_2670F.1_g326640 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 4.7e-17 92.0 225 33.3
Nitab4.5_0000960g0090 Nicotiana tabacum HOM05D000520 ORTHO05D000399 1.0e-16 90.9 258 31.0
PGSC0003DMG400011344 Solanum tuberosum HOM05D000520 ORTHO05D000399 1.0e-16 90.9 258 34.1
Haze_01213 Corylus avellana HOM05D000520 ORTHO05D000399 1.8e-16 90.1 253 35.2
HanXRQChr03g0080771 Helianthus annuus HOM05D000520 ORTHO05D000399 2.3e-16 89.7 238 32.4
SGA_v2.0_scaffold67G22639 Striga asiatica HOM05D000520 ORTHO05D000399 8.8e-16 87.8 263 33.8
Lsat_1_v5_gn_5_53640 Lactuca sativa HOM05D000520 ORTHO05D000399 1.5e-15 87.0 243 30.5
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.4e-15 85.5 198 33.3
vmacro08145 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 4.4e-15 85.5 240 30.8
TAR636G3055 Trochodendron aralioides HOM05D000520 ORTHO05D000399 5.7e-15 85.1 246 31.7
CAN.G129.22 Capsicum annuum HOM05D000520 ORTHO05D000399 1.4e-13 80.5 253 34.0
GSVIVG01017753001 Vitis vinifera HOM05D000520 ORTHO05D000399 1.4e-13 80.5 249 34.9
Ah.13g074900 Amaranthus hybridus HOM05D000520 ORTHO05D000399 1.8e-13 80.1 208 29.8
AUR62000774 Chenopodium quinoa HOM05D000520 ORTHO05D000399 9.1e-13 77.8 183 36.6
EL10Ac3g06590 Beta vulgaris HOM05D000520 ORTHO05D000399 2.0e-12 76.6 223 28.7
Solyc01g066880.3 Solanum lycopersicum HOM05D000520 ORTHO05D000399 1.7e-11 73.6 264 29.5
Ah.04g153860 Amaranthus hybridus HOM05D000520 ORTHO05D000399 2.9e-11 72.8 224 28.6
Sabra10G0014300 Salix brachista HOM05D000520 ORTHO05D000399 3.8e-11 72.4 233 30.9
AUR62005195 Chenopodium quinoa HOM05D000520 ORTHO05D000399 8.5e-11 71.2 183 30.6
CiPaw.01G149000 Carya illinoinensis HOM05D000520 ORTHO05D000399 1.9e-10 70.1 247 28.7
Sopen01g028480 Solanum pennellii HOM05D000520 ORTHO05D000399 4.2e-10 68.9 262 29.0
Manes.03G194600 Manihot esculenta HOM05D000520 ORTHO05D000399 7.2e-10 68.2 247 27.9
TPR.G13851 Trifolium pratense HOM05D000520 ORTHO05D000399 9.4e-10 67.8 225 33.8
Ca_01940_v3 Cicer arietinum L. HOM05D000520 ORTHO05D000399 1.6e-09 67.0 238 31.5
Lj6g0005585 Lotus japonicus HOM05D000520 ORTHO05D000399 1.6e-09 67.0 236 34.3
Lalb_Chr07g0177721 Lupinus albus HOM05D000520 ORTHO05D000399 2.1e-09 66.6 230 29.6
Glyma.09G045200 Glycine max HOM05D000520 ORTHO05D000399 2.7e-09 66.2 229 27.1
Glyma.15G147400 Glycine max HOM05D000520 ORTHO05D000399 2.7e-09 66.2 224 31.2
GSVIVG01027966001 Vitis vinifera HOM05D000520 ORTHO05D000399 6.1e-09 65.1 40 72.5
TWI12G0219 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 8.0e-09 64.7 40 72.5
Hma1.2p1_1292F.1_g273650 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.0e-08 64.3 39 76.9
Hma1.2p1_1374F.1_g278785 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.0e-08 64.3 39 76.9
Cpa.g.sc48.88 Carica papaya HOM05D000520 ORTHO05D000399 1.4e-08 63.9 40 72.5
Lalb_Chr13g0303641 Lupinus albus HOM05D000520 ORTHO05D000399 1.4e-08 63.9 238 29.0
Phvul.001G205300 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 1.4e-08 63.9 48 62.5
Potri.005G026100 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.4e-08 63.9 254 28.0
Atru.chr5.1202 Acer truncatum HOM05D000520 ORTHO05D000399 1.8e-08 63.5 49 61.2
Aqoxy5G00713 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 2.3e-08 63.2 39 74.4
Nn3g21431 Nelumbo nucifera HOM05D000520 ORTHO05D000399 3.0e-08 62.8 39 71.8
Manes.05G064600 Manihot esculenta HOM05D000520 ORTHO05D000399 3.9e-08 62.4 39 71.8
Manes.09G169700 Manihot esculenta HOM05D000520 ORTHO05D000399 3.9e-08 62.4 39 74.4
CiPaw.07G020900 Carya illinoinensis HOM05D000520 ORTHO05D000399 5.2e-08 62.0 40 67.5
Sc16g0008600 Simmondsia chinensis HOM05D000520 ORTHO05D000399 5.2e-08 62.0 299 24.7
Dinv30800 Davidia involucrata HOM05D000520 ORTHO05D000399 6.7e-08 61.6 39 74.4
Manes.08G118400 Manihot esculenta HOM05D000520 ORTHO05D000399 6.7e-08 61.6 39 74.4
Phvul.009G247600 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 6.7e-08 61.6 227 31.3
MELO3C006660.2 Cucumis melo HOM05D000520 ORTHO05D000399 8.8e-08 61.2 49 59.2
CsaV3_3G014590 Cucumis sativus L. HOM05D000520 ORTHO05D000399 8.8e-08 61.2 49 59.2
Manes.01G216400 Manihot esculenta HOM05D000520 ORTHO05D000399 8.8e-08 61.2 34 82.4
Medtr7g108560 Medicago truncatula HOM05D000520 ORTHO05D000399 8.8e-08 61.2 38 73.7
TAR622G0348 Trochodendron aralioides HOM05D000520 ORTHO05D011236 8.8e-08 61.2 185 31.9
vmacro22973 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 8.8e-08 61.2 39 71.8
Actinidia21058 Actinidia chinensis HOM05D000520 ORTHO05D000399 1.1e-07 60.8 32 84.4
Actinidia24838 Actinidia chinensis HOM05D000520 ORTHO05D000399 1.1e-07 60.8 32 84.4
CANSAT54G1029 Cannabis sativa HOM05D000520 ORTHO05D000399 1.1e-07 60.8 52 57.7
Prupe.6G321400 Prunus persica HOM05D000520 ORTHO05D000399 1.1e-07 60.8 36 75.0
Sed0022713 Sechium edule HOM05D000520 ORTHO05D000399 1.1e-07 60.8 38 65.8
VMungo1383G1757 Vigna mungo HOM05D000520 ORTHO05D000399 1.1e-07 60.8 48 60.4
Lj5g0012045 Lotus japonicus HOM05D000520 ORTHO05D000399 1.5e-07 60.5 42 61.9
Potri.010G024700 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.5e-07 60.5 39 71.8
Sed0005450 Sechium edule HOM05D000520 ORTHO05D000399 1.5e-07 60.5 251 29.9
CSS0021736 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.0e-07 60.1 217 32.7
Cc02_g33120 Coffea canephora HOM05D000520 ORTHO05D000399 2.0e-07 60.1 40 67.5
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 2.0e-07 60.1 168 31.0
Thecc.01G296000 Theobroma cacao HOM05D000520 ORTHO05D000399 2.0e-07 60.1 47 61.7
TAR362G1070 Trochodendron aralioides HOM05D000520 ORTHO05D000399 2.0e-07 60.1 36 77.8
Ciclev10021017m.g Citrus clementina HOM05D000520 ORTHO05D000399 2.6e-07 59.7 44 65.9
TAR633G1595 Trochodendron aralioides HOM05D000520 ORTHO05D000399 2.6e-07 59.7 38 73.7
Glyma.19G209500 Glycine max HOM05D000520 ORTHO05D000399 3.3e-07 59.3 48 58.3
MBI19_g29233_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D000399 3.3e-07 59.3 37 81.1
MD11G1304000 Malus domestica HOM05D000520 ORTHO05D000399 3.3e-07 59.3 38 68.4
Nn4g25875 Nelumbo nucifera HOM05D000520 ORTHO05D000399 3.3e-07 59.3 40 65.0
Potri.014G132000 Populus trichocarpa HOM05D000520 ORTHO05D000399 3.3e-07 59.3 71 46.5
VMungo1309G2144 Vigna mungo HOM05D000520 ORTHO05D000399 3.3e-07 59.3 234 24.8
Atru.chr2.24 Acer truncatum HOM05D000520 ORTHO05D000399 4.4e-07 58.9 33 78.8
COL.COLO4_23389 Corchorus olitorius HOM05D000520 ORTHO05D000399 4.4e-07 58.9 41 68.3
Dinv40323 Davidia involucrata HOM05D000520 ORTHO05D000399 4.4e-07 58.9 39 74.4
Oeu030336.1 Olea europaea HOM05D000520 ORTHO05D000399 4.4e-07 58.9 41 63.4
RcHm_v2.0_Chr6g0293381 Rosa chinensis HOM05D000520 ORTHO05D000399 4.4e-07 58.9 38 71.1
EL10Ac4g09925 Beta vulgaris HOM05D000520 ORTHO05D000399 5.7e-07 58.5 32 78.1
MELO3C006564.2 Cucumis melo HOM05D000520 ORTHO05D000399 5.7e-07 58.5 64 48.4
CsaV3_3G013710 Cucumis sativus L. HOM05D000520 ORTHO05D000399 5.7e-07 58.5 64 48.4
Manes.15G012800 Manihot esculenta HOM05D000520 ORTHO05D000399 5.7e-07 58.5 39 69.2
SalBow3G2984 Salvia bowleyana HOM05D000520 ORTHO05D000399 5.7e-07 58.5 185 30.8
Hund21707 Selenicereus undatus HOM05D000520 ORTHO05D000399 5.7e-07 58.5 39 71.8
Ah.04g161080 Amaranthus hybridus HOM05D000520 ORTHO05D000399 7.4e-07 58.2 31 83.9
BcaB07g31116 Brassica carinata HOM05D000520 ORTHO05D000399 7.4e-07 58.2 82 46.3
MBI18_g04688_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D000399 7.4e-07 58.2 271 28.0
ClCG02G015460 Citrullus lanatus HOM05D000520 ORTHO05D000399 9.7e-07 57.8 260 28.5
GSVIVG01031153001 Vitis vinifera HOM05D000520 ORTHO05D000399 9.7e-07 57.8 33 75.8
Cfa006623 Carpinus fangiana HOM05D000520 ORTHO05D000399 1.3e-06 57.4 40 62.5
ClCG05G005420 Citrullus lanatus HOM05D000520 ORTHO05D000399 1.3e-06 57.4 39 66.7
Haze_04146 Corylus avellana HOM05D000520 ORTHO05D000399 1.3e-06 57.4 40 62.5
RcHm_v2.0_Chr4g0422111 Rosa chinensis HOM05D000520 ORTHO05D000399 1.3e-06 57.4 48 62.5
THA.LOC104821721 Tarenaya hassleriana HOM05D000520 ORTHO05D000399 1.3e-06 57.4 248 29.0
Glyma.03G212400 Glycine max HOM05D000520 ORTHO05D000399 1.7e-06 57.0 46 58.7
Glyma.17G026000 Glycine max HOM05D000520 ORTHO05D000399 1.7e-06 57.0 251 33.1
Psat1g153560 Pisum sativum HOM05D000520 ORTHO05D000399 1.7e-06 57.0 254 30.7
PGR031G0260 Punica granatum HOM05D000520 ORTHO05D000399 1.7e-06 57.0 39 66.7
QL12p026987 Quercus lobata HOM05D000520 ORTHO05D000399 1.7e-06 57.0 44 63.6
Rhsim01G0283400 Rhododendron simsii HOM05D000520 ORTHO05D000399 1.7e-06 57.0 191 33.0
TPR.G9635 Trifolium pratense HOM05D000520 ORTHO05D000399 1.7e-06 57.0 37 70.3
TWI59G1036 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 1.7e-06 57.0 40 65.0
vmacro19619 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 1.7e-06 57.0 35 74.3
Actinidia21490 Actinidia chinensis HOM05D000520 ORTHO05D000399 2.2e-06 56.6 40 65.0
BcaC04g22039 Brassica carinata HOM05D000520 ORTHO05D000399 2.2e-06 56.6 82 45.1
A09p19190 Brassica napus HOM05D000520 ORTHO05D000399 2.2e-06 56.6 82 45.1
C09p24200 Brassica napus HOM05D000520 ORTHO05D000399 2.2e-06 56.6 82 45.1
BolC9t55337H Brassica oleracea HOM05D000520 ORTHO05D000399 2.2e-06 56.6 82 45.1
BraA09t37537Z Brassica rapa HOM05D000520 ORTHO05D000399 2.2e-06 56.6 82 45.1
CSS0032030 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.2e-06 56.6 40 65.0
CSS0034702 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.2e-06 56.6 48 56.2
Glyma.13G208400 Glycine max HOM05D000520 ORTHO05D000399 2.2e-06 56.6 68 45.6
Gohir.D08G225800 Gossypium hirsutum HOM05D000520 ORTHO05D000399 2.2e-06 56.6 269 27.5
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 2.2e-06 56.6 37 67.6
Prupe.8G257200 Prunus persica HOM05D000520 ORTHO05D000399 2.2e-06 56.6 38 65.8
Rhsim05G0141100 Rhododendron simsii HOM05D000520 ORTHO05D000399 2.2e-06 56.6 38 65.8
vmacro14992 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 2.2e-06 56.6 32 78.1
CiPaw.08G097700 Carya illinoinensis HOM05D000520 ORTHO05D000399 2.8e-06 56.2 45 64.4
Duzib133G1196 Durio zibethinus HOM05D000520 ORTHO05D000399 2.8e-06 56.2 34 73.5
Lalb_Chr02g0148151 Lupinus albus HOM05D000520 ORTHO05D000399 2.8e-06 56.2 43 62.8
Sabra14G0098100 Salix brachista HOM05D000520 ORTHO05D000399 2.8e-06 56.2 46 60.9
Hund00943 Selenicereus undatus HOM05D000520 ORTHO05D000399 2.8e-06 56.2 41 65.9
TWI14G0439 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 2.8e-06 56.2 40 62.5
HPP92_026816 Vanilla planifolia HOM05D000520 ORTHO05D000399 2.8e-06 56.2 259 27.0
Actinidia40258 Actinidia chinensis HOM05D000520 ORTHO05D000399 3.7e-06 55.8 41 61.0
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 3.7e-06 55.8 32 78.1
arahy.Tifrunner.gnm1.ann1.MC15QU Arachis hypogaea HOM05D000520 ORTHO05D000399 3.7e-06 55.8 38 63.2
arahy.Tifrunner.gnm1.ann1.Z22JU0 Arachis hypogaea HOM05D000520 ORTHO05D000399 3.7e-06 55.8 38 63.2
CANSAT25G1223 Cannabis sativa HOM05D000520 ORTHO05D000399 3.7e-06 55.8 41 65.9
CARHR289750 Cardamine hirsuta HOM05D000520 ORTHO05D000399 3.7e-06 55.8 109 36.7
ClCG05G006050 Citrullus lanatus HOM05D000520 ORTHO05D000399 3.7e-06 55.8 38 63.2
Dinv33031 Davidia involucrata HOM05D000520 ORTHO05D000399 3.7e-06 55.8 227 32.6
Eucgr.H04515 Eucalyptus grandis HOM05D000520 ORTHO05D000399 3.7e-06 55.8 43 65.1
Gorai.004G239800 Gossypium raimondii HOM05D000520 ORTHO05D000399 3.7e-06 55.8 271 27.3
Lj1g0026141 Lotus japonicus HOM05D000520 ORTHO05D000399 3.7e-06 55.8 69 44.9
Potri.002G206900 Populus trichocarpa HOM05D000520 ORTHO05D000399 3.7e-06 55.8 46 63.0
Sp2g06720 Schrenkiella parvula HOM05D000520 ORTHO05D000399 3.7e-06 55.8 91 40.7
CANSAT25G1513 Cannabis sativa HOM05D000520 ORTHO05D000399 4.8e-06 55.5 40 67.5
Haze_04884 Corylus avellana HOM05D000520 ORTHO05D000399 4.8e-06 55.5 44 63.6
MELO3C004225.2 Cucumis melo HOM05D000520 ORTHO05D000399 4.8e-06 55.5 263 30.4
Lj1A33G81 Lonicera japonica HOM05D000520 ORTHO05D000399 4.8e-06 55.5 216 29.6
Lj1P1156T18 Lonicera japonica HOM05D000520 ORTHO05D000399 4.8e-06 55.5 39 61.5
Lalb_Chr04g0259791 Lupinus albus HOM05D000520 ORTHO05D000399 4.8e-06 55.5 32 75.0
Phvul.006G090100 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 4.8e-06 55.5 39 59.0
Sabra05G0031500 Salix brachista HOM05D000520 ORTHO05D000399 4.8e-06 55.5 43 67.4
SEGI_07017 Sequoiadendron giganteum HOM05D000520 ORTHO05D000399 4.8e-06 55.5 38 71.1
VMungo1215G1385 Vigna mungo HOM05D000520 ORTHO05D000399 4.8e-06 55.5 41 63.4
CiPaw.08G162500 Carya illinoinensis HOM05D000520 ORTHO05D000399 6.3e-06 55.1 40 62.5
Eucgr.K03459 Eucalyptus grandis HOM05D000520 ORTHO05D000399 6.3e-06 55.1 43 62.8
Thecc.04G222100 Theobroma cacao HOM05D000520 ORTHO05D000399 6.3e-06 55.1 40 65.0
CsaV3_2G006610 Cucumis sativus L. HOM05D000520 ORTHO05D000399 8.2e-06 54.7 34 67.6
Thhalv10023508m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 8.2e-06 54.7 81 43.2
FAN24G2023 Fragaria x ananassa HOM05D000520 ORTHO05D000399 8.2e-06 54.7 35 68.6
FAN27G0616 Fragaria x ananassa HOM05D000520 ORTHO05D000399 8.2e-06 54.7 35 68.6
Peaxi162Scf00037g00123 Petunia axillaris HOM05D000520 ORTHO05D000399 8.2e-06 54.7 68 48.5
Phvul.007G196900 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 8.2e-06 54.7 33 72.7
Rhsim08G0085000 Rhododendron simsii HOM05D006412 ORTHO05D008025 8.2e-06 54.7 30 80.0
Sabra02G0152800 Salix brachista HOM05D000520 ORTHO05D000399 8.2e-06 54.7 38 65.8
Hund18128 Selenicereus undatus HOM05D000520 ORTHO05D000399 8.2e-06 54.7 44 63.6
Sc09g0003280 Simmondsia chinensis HOM05D000520 ORTHO05D000399 8.2e-06 54.7 36 72.2
THA.LOC104820796 Tarenaya hassleriana HOM05D000520 ORTHO05D000399 8.2e-06 54.7 130 34.6


User provided reference genes

Program Settings