Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 3.7e-87 324.7 151 100.0
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.7e-68 262.7 148 83.8
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 2.3e-68 262.3 151 80.8
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 7.3e-67 257.3 156 75.6
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 3.1e-65 251.9 147 81.0
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 1.5e-64 249.6 147 80.3
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 2.6e-64 248.8 147 79.6
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 9.9e-64 246.9 140 81.4
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 2.2e-63 245.7 140 78.6
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 2.4e-62 242.3 141 78.0
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 9.3e-62 240.4 151 76.2
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 4.6e-61 238.0 141 78.0
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 4.6e-61 238.0 145 77.9
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 7.9e-61 237.3 140 77.9
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 1.3e-60 236.5 145 73.8
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.8e-60 236.1 147 74.1
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 2.3e-60 235.7 140 78.6
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 2.3e-60 235.7 147 73.5
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 5.1e-60 234.6 141 78.0
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 6.7e-60 234.2 151 72.8
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 8.7e-60 233.8 148 73.6
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.1e-59 233.4 151 72.8
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.1e-59 233.4 151 72.8
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.9e-59 232.6 140 76.4
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 1.9e-59 232.6 147 73.5
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 5.6e-59 231.1 152 73.7
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 7.4e-59 230.7 139 76.3
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 9.6e-59 230.3 141 75.9
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 1.3e-58 229.9 145 73.1
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 2.1e-58 229.2 147 72.8
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 3.6e-58 228.4 141 75.9
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 3.6e-58 228.4 141 75.9
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 8.1e-58 227.3 140 75.7
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 8.1e-58 227.3 147 72.1
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 1.4e-57 226.5 148 73.0
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 1.4e-57 226.5 141 75.9
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 1.8e-57 226.1 142 78.2
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 3.1e-57 225.3 148 72.3
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 5.3e-57 224.6 141 74.5
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 9.0e-57 223.8 157 68.8
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 2.0e-56 222.6 143 75.5
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 2.6e-56 222.2 149 69.8
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 5.8e-56 221.1 159 67.9
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 5.8e-56 221.1 151 70.2
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 3.8e-55 218.4 150 67.3
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 8.4e-55 217.2 140 71.4
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.1e-54 216.9 147 69.4
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.4e-54 216.5 139 71.2
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 1.4e-54 216.5 140 70.7
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 1.9e-54 216.1 147 70.7
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 2.4e-54 215.7 153 68.6
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 4.2e-54 214.9 140 72.9
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 4.2e-54 214.9 140 72.9
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 4.2e-54 214.9 147 70.1
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 7.1e-54 214.2 151 69.5
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 7.1e-54 214.2 151 67.5
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 1.2e-53 213.4 147 71.4
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.2e-53 213.4 151 70.9
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.6e-53 213.0 141 72.3
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 2.7e-53 212.2 140 70.7
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 2.7e-53 212.2 141 70.9
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 6.0e-53 211.1 141 70.2
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 6.0e-53 211.1 140 70.7
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 2.3e-52 209.1 146 69.2
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 8.7e-52 207.2 151 66.9
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.1e-51 206.8 139 66.9
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.1e-51 206.8 149 67.1
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 3.3e-51 205.3 151 66.9
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 5.6e-51 204.5 151 65.6
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 4.0e-49 198.4 151 65.6
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 2.6e-48 195.7 151 62.9
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.0e-47 193.7 135 69.6
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 5.5e-46 188.0 142 63.4
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 2.1e-45 186.0 135 68.1
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 2.4e-41 172.6 150 54.7
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 2.4e-41 172.6 150 54.7
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 3.1e-41 172.2 141 56.7
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 9.0e-41 170.6 150 54.0
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 2.0e-40 169.5 150 53.3
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 2.6e-40 169.1 150 53.3
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 2.6e-40 169.1 150 53.3
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 3.4e-40 168.7 156 53.8
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 7.6e-40 167.5 149 53.7
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 1.0e-39 167.2 150 54.7
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 2.2e-39 166.0 150 54.0
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 5.0e-39 164.9 148 54.1
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 5.0e-39 164.9 148 54.1
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.6e-34 149.8 103 64.1
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 4.1e-33 145.2 142 52.8
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.0e-32 142.9 129 55.0
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 5.9e-32 141.4 141 48.2
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 4.4e-27 125.2 73 75.3
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 1.6e-21 106.7 64 75.0
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 7.9e-21 104.4 71 69.0
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 2.3e-20 102.8 73 69.9
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 2.2e-18 96.3 69 62.3
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 8.2e-18 94.4 118 39.0
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 9.1e-17 90.9 118 39.0


User provided reference genes

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