Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037612.1 Olea europaea HOM05D004637 ORTHO05D005320 1.5e-98 362.8 182 100.0
Oeu045704.1 Olea europaea HOM05D004637 ORTHO05D005320 1.3e-86 323.2 170 95.3
Hma1.2p1_0360F.1_g135900 Hydrangea macrophylla HOM05D004637 ORTHO05D005320 1.4e-83 313.2 169 91.7
Actinidia08272 Actinidia chinensis HOM05D004637 ORTHO05D005320 2.0e-82 309.3 169 90.5
Lj4A64T29 Lonicera japonica HOM05D004637 ORTHO05D005320 2.0e-82 309.3 170 87.6
Dinv39271 Davidia involucrata HOM05D004637 ORTHO05D005320 4.4e-82 308.1 169 89.3
Dinv35927 Davidia involucrata HOM05D004637 ORTHO05D005320 5.7e-82 307.8 169 88.8
MSTRG.25070 Avicennia marina HOM05D004637 ORTHO05D005320 9.7e-82 307.0 170 88.2
CSS0035210 Camellia sinensis var. sinensis HOM05D004637 ORTHO05D005320 1.7e-81 306.2 170 87.1
Migut.N02728 Erythranthe guttata HOM05D004637 ORTHO05D005320 2.2e-81 305.8 170 87.6
CAN.G1194.20 Capsicum annuum HOM05D004637 ORTHO05D005320 8.2e-81 303.9 170 87.1
Cc10_g04860 Coffea canephora HOM05D004637 ORTHO05D005320 9.1e-80 300.4 170 85.9
Lsat_1_v5_gn_1_22460 Lactuca sativa HOM05D004637 ORTHO05D005320 2.7e-79 298.9 170 85.3
Sopen12g030560 Solanum pennellii HOM05D004637 ORTHO05D005320 4.5e-79 298.1 170 85.3
PGSC0003DMG400015434 Solanum tuberosum HOM05D004637 ORTHO05D005320 5.9e-79 297.7 170 85.9
Solyc12g088660.2 Solanum lycopersicum HOM05D004637 ORTHO05D005320 3.8e-78 295.0 170 84.1
Thecc.08G001300 Theobroma cacao HOM05D004637 ORTHO05D005320 3.8e-78 295.0 166 86.1
CiPaw.15G052200 Carya illinoinensis HOM05D004637 ORTHO05D005320 2.5e-77 292.4 166 85.5
Atru.chr13.748 Acer truncatum HOM05D004637 ORTHO05D005320 4.2e-77 291.6 167 83.8
TAR381G1093 Trochodendron aralioides HOM05D004637 ORTHO05D005320 4.2e-77 291.6 166 85.5
MELO3C010837.2 Cucumis melo HOM05D004637 ORTHO05D005320 7.2e-77 290.8 166 82.5
CsaV3_2G026470 Cucumis sativus L. HOM05D004637 ORTHO05D005320 7.2e-77 290.8 166 82.5
Eucgr.F00183 Eucalyptus grandis HOM05D004637 ORTHO05D005320 9.4e-77 290.4 167 86.8
Manes.05G177100 Manihot esculenta HOM05D004637 ORTHO05D005320 9.4e-77 290.4 166 84.3
Manes.18G041200 Manihot esculenta HOM05D004637 ORTHO05D005320 9.4e-77 290.4 166 84.3
unitig_26.g9809 Utricularia gibba HOM05D004637 ORTHO05D005320 9.4e-77 290.4 167 84.4
Nn5g30394 Nelumbo nucifera HOM05D004637 ORTHO05D005320 1.2e-76 290.0 166 84.9
QL02p003978 Quercus lobata HOM05D004637 ORTHO05D005320 1.2e-76 290.0 166 84.9
GSVIVG01009436001 Vitis vinifera HOM05D004637 ORTHO05D005320 1.2e-76 290.0 167 85.0
Nitab4.5_0006486g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 2.1e-76 289.3 194 75.3
Aqoxy5G01163 Aquilegia oxysepala HOM05D004637 ORTHO05D005320 2.7e-76 288.9 167 85.0
THA.LOC104824981 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 3.6e-76 288.5 170 81.2
Sabra14G0016200 Salix brachista HOM05D004637 ORTHO05D005320 4.7e-76 288.1 166 85.5
Potri.014G023800 Populus trichocarpa HOM05D004637 ORTHO05D005320 8.0e-76 287.3 166 85.5
HanXRQChr10g0309661 Helianthus annuus HOM05D004637 ORTHO05D005320 1.0e-75 287.0 170 82.9
Prupe.1G430800 Prunus persica HOM05D004637 ORTHO05D005320 1.8e-75 286.2 166 84.3
Sed0017846 Sechium edule HOM05D004637 ORTHO05D005320 3.0e-75 285.4 166 79.5
Gohir.A05G205600 Gossypium hirsutum HOM05D004637 ORTHO05D005320 5.2e-75 284.6 166 82.5
CANSAT54G2334 Cannabis sativa HOM05D004637 ORTHO05D005320 6.8e-75 284.3 166 83.7
Gohir.D05G208900 Gossypium hirsutum HOM05D004637 ORTHO05D005320 6.8e-75 284.3 166 82.5
Glyma.17G238800 Glycine max HOM05D004637 ORTHO05D005320 8.8e-75 283.9 166 81.3
Gorai.009G215300 Gossypium raimondii HOM05D004637 ORTHO05D005320 1.2e-74 283.5 166 81.9
PSO170G3952 Papaver somniferum HOM05D004637 ORTHO05D005320 1.2e-74 283.5 169 81.1
PSO210G5934 Papaver somniferum HOM05D004637 ORTHO05D005320 1.5e-74 283.1 169 80.5
Phvul.001G024600 Phaseolus vulgaris HOM05D004637 ORTHO05D005320 2.6e-74 282.3 166 81.9
Sc02g0007520 Simmondsia chinensis HOM05D004637 ORTHO05D005320 2.6e-74 282.3 169 78.7
AT4G07390 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 4.4e-74 281.6 167 80.2
Cfa018057 Carpinus fangiana HOM05D004637 ORTHO05D005320 5.7e-74 281.2 175 81.1
Glyma.14G085900 Glycine max HOM05D004637 ORTHO05D005320 5.7e-74 281.2 166 80.1
Zm00001eb104960 Zea mays HOM05D004637 ORTHO05D005320 2.2e-73 279.3 168 81.0
AL6G41290 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 2.8e-73 278.9 167 79.0
Thhalv10028929m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 4.8e-73 278.1 167 79.6
Sp6g10610 Schrenkiella parvula HOM05D004637 ORTHO05D005320 6.3e-73 277.7 167 80.2
TAR628G0069 Trochodendron aralioides HOM05D004637 ORTHO05D005320 6.3e-73 277.7 166 82.5
CARHR288440 Cardamine hirsuta HOM05D004637 ORTHO05D005320 1.1e-72 276.9 167 78.4
FvH4_2g33730 Fragaria vesca HOM05D004637 ORTHO05D005320 1.1e-72 276.9 166 81.3
Carub.0006s2649 Capsella rubella HOM05D004637 ORTHO05D005320 1.4e-72 276.6 166 78.3
Psat6g015000 Pisum sativum HOM05D004637 ORTHO05D005320 1.4e-72 276.6 166 80.7
TPR.G3787 Trifolium pratense HOM05D004637 ORTHO05D005320 1.4e-72 276.6 166 78.9
C03p33670 Brassica napus HOM05D004637 ORTHO05D005320 1.8e-72 276.2 167 79.0
BolC3t15687H Brassica oleracea HOM05D004637 ORTHO05D005320 1.8e-72 276.2 167 79.0
BcaB01g02883 Brassica carinata HOM05D004637 ORTHO05D005320 2.4e-72 275.8 167 79.0
Medtr1g018800 Medicago truncatula HOM05D004637 ORTHO05D005320 2.4e-72 275.8 166 80.7
Os07g0479200 Oryza sativa ssp. japonica HOM05D004637 ORTHO05D005320 2.4e-72 275.8 168 79.2
TAR628G0193 Trochodendron aralioides HOM05D004637 ORTHO05D005320 2.4e-72 275.8 166 82.5
A03p27890 Brassica napus HOM05D004637 ORTHO05D005320 3.1e-72 275.4 167 78.4
BraA03t12001Z Brassica rapa HOM05D004637 ORTHO05D005320 3.1e-72 275.4 167 78.4
MD08G1093700 Malus domestica HOM05D004637 ORTHO05D005320 4.1e-72 275.0 166 80.7
THA.LOC104825764 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 4.1e-72 275.0 166 77.7
MD15G1077400 Malus domestica HOM05D004637 ORTHO05D005320 9.1e-72 273.9 166 78.9
TWI56G1297 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 9.1e-72 273.9 166 78.3
vmacro21608 Vaccinium macrocarpon HOM05D004637 ORTHO05D005320 1.2e-71 273.5 153 88.2
VMungo0647G2267 Vigna mungo HOM05D004637 ORTHO05D005320 1.2e-71 273.5 166 79.5
Haze_18072 Corylus avellana HOM05D004637 ORTHO05D005320 1.6e-71 273.1 166 81.9
Lj5g0011390 Lotus japonicus HOM05D004637 ORTHO05D005320 4.5e-71 271.6 166 79.5
ClCG08G016150 Citrullus lanatus HOM05D004637 ORTHO05D005320 5.9e-71 271.2 166 78.9
RcHm_v2.0_Chr0c32g0501551 Rosa chinensis HOM05D004637 ORTHO05D005320 5.9e-71 271.2 166 79.5
arahy.Tifrunner.gnm1.ann1.RG91LC Arachis hypogaea HOM05D004637 ORTHO05D005320 1.0e-70 270.4 163 81.6
arahy.Tifrunner.gnm1.ann1.UI0UDP Arachis hypogaea HOM05D004637 ORTHO05D005320 1.0e-70 270.4 163 81.6
HPP92_003482 Vanilla planifolia HOM05D004637 ORTHO05D005320 1.3e-70 270.0 169 73.4
CiPaw.16G038000 Carya illinoinensis HOM05D004637 ORTHO05D005320 1.7e-70 269.6 161 81.4
PGR031G3707 Punica granatum HOM05D004637 ORTHO05D005320 2.2e-70 269.2 168 78.6
Aa31LG8G3140 Aethionema arabicum HOM05D004637 ORTHO05D005320 3.8e-70 268.5 167 76.0
TWI36G0292 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 8.5e-70 267.3 166 76.5
Ah.08g212480 Amaranthus hybridus HOM05D004637 ORTHO05D005320 3.2e-69 265.4 191 69.6
FAN27G2280 Fragaria x ananassa HOM05D004637 ORTHO05D005320 3.2e-69 265.4 190 71.6
Peaxi162Scf00160g00034 Petunia axillaris HOM05D004637 ORTHO05D005320 4.2e-69 265.0 150 86.0
FAN15G1438 Fragaria x ananassa HOM05D004637 ORTHO05D005320 1.6e-68 263.1 183 72.7
RcHm_v2.0_Chr6g0308821 Rosa chinensis HOM05D004637 ORTHO05D005320 2.7e-68 262.3 166 78.3
PGR083G2827 Punica granatum HOM05D004637 ORTHO05D005320 1.8e-67 259.6 168 73.2
CDE01G0812 Ceratophyllum demersum HOM05D004637 ORTHO05D005320 1.2e-66 256.9 169 74.0
BcaC01g04795 Brassica carinata HOM05D004637 ORTHO05D005320 5.7e-66 254.6 160 77.5
Eucgr.F02306 Eucalyptus grandis HOM05D004637 ORTHO05D005320 9.8e-66 253.8 166 72.9
EL10As7g23788 Beta vulgaris HOM05D004637 ORTHO05D005320 1.3e-65 253.4 202 64.9
Thhalv10015267m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 1.3e-65 253.4 167 71.9
Carub.0008s2014 Capsella rubella HOM05D004637 ORTHO05D005320 1.7e-65 253.1 167 71.9
AL8G35940 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 6.3e-65 251.1 167 72.5
Duzib093G0653 Durio zibethinus HOM05D004637 ORTHO05D005320 8.3e-65 250.8 147 84.4
Nitab4.5_0006004g0010 Nicotiana tabacum HOM05D004637 ORTHO05D005320 7.0e-64 247.7 170 74.7
Rhsim07G0225500 Rhododendron simsii HOM05D004637 ORTHO05D005320 9.2e-64 247.3 195 69.7
Actinidia38079 Actinidia chinensis HOM05D004637 ORTHO05D005320 1.2e-63 246.9 135 90.4
CARHR285840 Cardamine hirsuta HOM05D004637 ORTHO05D005320 6.6e-62 241.1 167 68.9
SEGI_04928 Sequoiadendron giganteum HOM05D004637 ORTHO05D005320 1.1e-61 240.4 168 67.3
Ciclev10002344m.g Citrus clementina HOM05D004637 ORTHO05D005320 5.6e-61 238.0 167 68.3
ECA247G2514 Erigeron canadensis HOM05D004637 ORTHO05D005320 1.2e-60 236.9 133 85.7
BcaB05g22509 Brassica carinata HOM05D004637 ORTHO05D005320 3.0e-59 232.3 167 67.7
BcaC03g14011 Brassica carinata HOM05D004637 ORTHO05D005320 1.2e-58 230.3 167 65.9
C02p12470 Brassica napus HOM05D004637 ORTHO05D005320 1.2e-58 230.3 167 65.9
BolC2t07347H Brassica oleracea HOM05D004637 ORTHO05D005320 1.2e-58 230.3 167 65.9
A02p07110 Brassica napus HOM05D004637 ORTHO05D005320 1.5e-58 229.9 167 66.5
BraA02t05792Z Brassica rapa HOM05D004637 ORTHO05D005320 1.5e-58 229.9 167 66.5
SalBow7G4009 Salvia bowleyana HOM05D004637 ORTHO05D005320 4.9e-57 224.9 129 87.6
Nitab4.5_0010118g0060 Nicotiana tabacum HOM05D004637 ORTHO05D005320 3.2e-56 222.2 184 65.2
FAN20G0860 Fragaria x ananassa HOM05D004637 ORTHO05D005320 7.0e-56 221.1 195 61.5
SMO365G0080 Selaginella moellendorffii HOM05D004637 ORTHO05D005320 7.8e-55 217.6 169 60.9
BolC3t13818H Brassica oleracea HOM05D004637 ORTHO05D005320 8.6e-54 214.2 162 64.2
AagrBONN_evm.TU.Sc2ySwM_344.2883 Anthoceros agrestis HOM05D004637 ORTHO05D005320 1.1e-53 213.8 169 62.1
Pp3c3_8350 Physcomitrium patens HOM05D004637 ORTHO05D005320 9.5e-53 210.7 167 61.1
Pp3c4_22670 Physcomitrium patens HOM05D004637 ORTHO05D005320 6.8e-51 204.5 163 58.3
Mapoly0040s0013 Marchantia polymorpha HOM05D004637 ORTHO05D005320 2.6e-50 202.6 169 56.8
AT5G59470 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 3.4e-50 202.2 135 71.9
Sp6g21160 Schrenkiella parvula HOM05D004637 ORTHO05D005320 9.8e-50 200.7 135 72.6
Peaxi162Scf01087g00125 Petunia axillaris HOM05D004637 ORTHO05D005320 1.7e-49 199.9 121 81.0
Nitab4.5_0004339g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 5.4e-48 194.9 138 72.5
FAN24G1748 Fragaria x ananassa HOM05D004637 ORTHO05D005320 9.2e-48 194.1 166 63.9
HPP92_026880 Vanilla planifolia HOM05D004637 ORTHO05D005320 4.6e-47 191.8 118 74.6
CBR_g8228 Chara braunii HOM05D004637 ORTHO05D005320 5.8e-42 174.9 161 55.9
Cpa.g.sc21.155 Carica papaya HOM05D004637 ORTHO05D005320 7.5e-42 174.5 104 82.7
CBR_g40794 Chara braunii HOM05D004637 ORTHO05D005320 9.8e-42 174.1 160 56.2
QL07p047618 Quercus lobata HOM05D004637 ORTHO05D005320 2.9e-41 172.6 102 83.3
BcaC01g04787 Brassica carinata HOM05D004637 ORTHO05D005320 1.1e-40 170.6 100 82.0
AUR62002897 Chenopodium quinoa HOM05D004637 ORTHO05D005320 1.1e-40 170.6 106 76.4
AUR62035253 Chenopodium quinoa HOM05D004637 ORTHO05D005320 1.1e-40 170.6 106 76.4
Hund04212 Selenicereus undatus HOM05D004637 ORTHO05D005320 7.1e-40 167.9 138 61.6
Lalb_Chr22g0354941 Lupinus albus HOM05D004637 ORTHO05D005320 1.1e-37 160.6 112 73.2
SGA_v2.0_scaffold588G53062 Striga asiatica HOM05D004637 ORTHO05D005320 8.9e-35 151.0 169 53.8
Lalb_Chr22g0354931 Lupinus albus HOM05D004637 ORTHO05D005320 1.4e-24 117.1 71 74.6
QL11p041834 Quercus lobata HOM05D001716 ORTHO05D004234 1.7e-22 110.2 98 64.3
Cc02_g27600 Coffea canephora HOM05D004637 ORTHO05D005320 2.3e-22 109.8 72 72.2
PRCOL_00005305 Prasinoderma coloniale HOM05D004637 ORTHO05D005320 2.0e-18 96.7 141 38.3
Peaxi162Scf00160g00035 Petunia axillaris HOM05D004637 ORTHO05D005320 5.8e-18 95.1 56 82.1
RcHm_v2.0_Chr1g0356881 Rosa chinensis HOM05D004637 ORTHO05D005320 4.2e-16 89.0 51 86.3
COL.COLO4_10117 Corchorus olitorius HOM05D004637 ORTHO05D005320 2.7e-15 86.3 49 81.6
SGA_v2.0_scaffold137G35065 Striga asiatica HOM05D004637 ORTHO05D005320 3.9e-14 82.4 42 83.3
Cre17.g722500 Chlamydomonas reinhardtii HOM05D004637 ORTHO05D005320 7.4e-13 78.2 151 31.1
Ca_13257_v3 Cicer arietinum L. HOM05D004637 ORTHO05D005320 8.1e-12 74.7 43 79.1
BcaC01g06520 Brassica carinata HOM05D004637 ORTHO05D005320 1.4e-11 73.9 48 70.8
MCO13G491 Micromonas commoda HOM05D004637 ORTHO05D005320 9.0e-11 71.2 161 31.7
MCO13G508 Micromonas commoda HOM05D004637 ORTHO05D005320 9.0e-11 71.2 161 31.7
BcaB01g04583 Brassica carinata HOM05D004637 ORTHO05D005320 2.0e-10 70.1 64 45.3
HPP92_014526 Vanilla planifolia HOM05D004637 ORTHO05D005320 3.8e-09 65.9 52 55.8
BcaB04g17066 Brassica carinata HOM05D037786 ORTHO05D005320 1.6e-07 60.5 46 67.4
Cre06.g261300 Chlamydomonas reinhardtii HOM05D004637 ORTHO05D005320 6.0e-07 58.5 143 28.7


User provided reference genes

Program Settings