Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037569.1 Olea europaea HOM05D007996 ORTHO05D009821 8.1e-29 129.8 69 100.0
Oeu045473.1 Olea europaea HOM05D007996 ORTHO05D009821 2.0e-27 125.2 69 97.1
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 1.1e-09 66.2 68 66.2
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 1.9e-09 65.5 71 62.0
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 2.4e-09 65.1 68 64.7
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 2.4e-09 65.1 68 64.7
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 2.1e-08 62.0 70 60.0
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 2.7e-08 61.6 72 58.3
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 3.5e-08 61.2 63 63.5
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 4.6e-08 60.8 63 60.3
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 4.6e-08 60.8 68 64.7
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 7.9e-08 60.1 67 58.2
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 7.9e-08 60.1 67 62.7
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 7.9e-08 60.1 74 56.8
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 1.0e-07 59.7 63 60.3
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 1.3e-07 59.3 67 59.7
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 1.3e-07 59.3 68 58.8
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 1.8e-07 58.9 76 56.6
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 1.8e-07 58.9 76 56.6
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 1.8e-07 58.9 76 56.6
Lalb_Chr08g0236981 Lupinus albus HOM05D007996 ORTHO05D009821 1.8e-07 58.9 70 57.1
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 2.3e-07 58.5 67 59.7
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 3.0e-07 58.2 66 53.0
Aqoxy5G03550 Aquilegia oxysepala HOM05D007996 ORTHO05D009821 5.1e-07 57.4 69 56.5
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 6.7e-07 57.0 65 53.8
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 6.7e-07 57.0 67 56.7
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 1.1e-06 56.2 69 56.5
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 1.1e-06 56.2 67 56.7
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 1.1e-06 56.2 67 59.7
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 1.5e-06 55.8 65 60.0
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 1.5e-06 55.8 68 61.8
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 1.5e-06 55.8 77 51.9
Peaxi162Scf00089g00319 Petunia axillaris HOM05D007996 ORTHO05D009821 2.5e-06 55.1 70 55.7
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 2.5e-06 55.1 67 58.2
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 3.3e-06 54.7 67 56.7
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 5.6e-06 53.9 66 59.1
SalBow5G2505 Salvia bowleyana HOM05D007996 ORTHO05D009821 5.6e-06 53.9 67 49.3
SalBow5G3809 Salvia bowleyana HOM05D007996 ORTHO05D009821 5.6e-06 53.9 67 49.3
Carub.0008s1039 Capsella rubella HOM05D013032 ORTHO05D009821 7.4e-06 53.5 72 51.4
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 7.4e-06 53.5 67 56.7
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 7.4e-06 53.5 43 72.1
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 7.4e-06 53.5 37 78.4
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 9.6e-06 53.1 71 54.9
THA.LOC109116227 Tarenaya hassleriana HOM05D007996 ORTHO05D009821 9.6e-06 53.1 66 53.0


User provided reference genes

Program Settings