Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037459.1 Olea europaea HOM05D017117 ORTHO05D025954 5.3e-154 547.7 293 100.0
Oeu034175.1 Olea europaea HOM05D017117 ORTHO05D291513 1.9e-119 433.0 432 61.1
Oeu042907.1 Olea europaea HOM05D017117 ORTHO05D025954 9.9e-44 181.4 112 83.9
Oeu037779.1 Olea europaea HOM05D004055 ORTHO05D004795 5.8e-36 155.6 175 57.1
unitig_736.g22361 Utricularia gibba HOM05D004055 ORTHO05D004795 4.5e-28 129.4 142 52.1
MSTRG.23289 Avicennia marina HOM05D004055 ORTHO05D004795 1.0e-27 128.3 175 48.0
Oeu014116.1 Olea europaea HOM05D017117 ORTHO05D025954 1.0e-27 128.3 123 61.0
Oeu047640.3 Olea europaea HOM05D004055 ORTHO05D004795 1.1e-26 124.8 96 65.6
Migut.L00046 Erythranthe guttata HOM05D004055 ORTHO05D004795 7.1e-26 122.1 149 48.3
Migut.H02472 Erythranthe guttata HOM05D004055 ORTHO05D004795 1.8e-24 117.5 246 35.0
SalBow8G2113 Salvia bowleyana HOM05D004055 ORTHO05D004795 3.9e-24 116.3 136 51.5
SGA_v2.0_scaffold47G17681 Striga asiatica HOM05D004055 ORTHO05D004795 1.8e-21 107.5 258 32.6
SalBow5G2387 Salvia bowleyana HOM05D004055 ORTHO05D004795 1.0e-19 101.7 122 47.5
Nitab4.5_0001582g0050 Nicotiana tabacum HOM05D004055 ORTHO05D004795 4.2e-18 96.3 131 46.6
CAN.G516.3 Capsicum annuum HOM05D004055 ORTHO05D004795 5.5e-18 95.9 144 45.1
AUR62003632 Chenopodium quinoa HOM05D004055 ORTHO05D004795 6.1e-17 92.4 147 40.8
AUR62017941 Chenopodium quinoa HOM05D004055 ORTHO05D004795 6.1e-17 92.4 147 40.8
TWI31G0449 Tripterygium wilfordii HOM05D004055 ORTHO05D004795 6.1e-17 92.4 147 42.2
Nitab4.5_0004021g0040 Nicotiana tabacum HOM05D004055 ORTHO05D004795 3.9e-16 89.7 95 52.6
TAR381G1437 Trochodendron aralioides HOM05D004055 ORTHO05D004795 8.8e-16 88.6 130 43.1
Cc07_g17540 Coffea canephora HOM05D004055 ORTHO05D004795 5.7e-15 85.9 135 41.5
Nn5g27192 Nelumbo nucifera HOM05D004055 ORTHO05D004795 5.7e-15 85.9 129 45.7
GSVIVG01034541001 Vitis vinifera HOM05D004055 ORTHO05D004795 7.4e-15 85.5 148 41.2
PGSC0003DMG400003992 Solanum tuberosum HOM05D004055 ORTHO05D004795 9.7e-15 85.1 148 39.9
CSS0019507 Camellia sinensis var. sinensis HOM05D004055 ORTHO05D004795 2.2e-14 84.0 148 43.2
DCAR_001415 Daucus carota HOM05D004055 ORTHO05D004795 2.2e-14 84.0 132 45.5
CiPaw.04G087200 Carya illinoinensis HOM05D004055 ORTHO05D004795 2.8e-14 83.6 143 41.3
Actinidia09813 Actinidia chinensis HOM05D004055 ORTHO05D004795 4.8e-14 82.8 136 41.2
CiPaw.03G129400 Carya illinoinensis HOM05D004055 ORTHO05D004795 4.8e-14 82.8 142 41.5
Solyc11g005450.3 Solanum lycopersicum HOM05D004055 ORTHO05D004795 4.8e-14 82.8 150 38.7
Sopen11g001460 Solanum pennellii HOM05D004055 ORTHO05D004795 4.8e-14 82.8 150 38.7
TWI79G0735 Tripterygium wilfordii HOM05D004055 ORTHO05D004795 8.2e-14 82.0 144 41.0
EL10Ac6g15243 Beta vulgaris HOM05D004055 ORTHO05D004795 1.4e-13 81.3 138 39.1
TAR625G1530 Trochodendron aralioides HOM05D004055 ORTHO05D004795 1.8e-13 80.9 151 39.1
CANSAT01G3086 Cannabis sativa HOM05D004055 ORTHO05D004795 3.1e-13 80.1 129 42.6
Ah.02g122270 Amaranthus hybridus HOM05D004055 ORTHO05D004795 4.1e-13 79.7 145 37.9
Potri.019G003900 Populus trichocarpa HOM05D004055 ORTHO05D004795 5.3e-13 79.3 145 40.0
FvH4_1g23670 Fragaria vesca HOM05D004055 ORTHO05D004795 2.6e-12 77.0 121 43.0
FAN26G2960 Fragaria x ananassa HOM05D004055 ORTHO05D004795 2.6e-12 77.0 121 43.0
CsaV3_6G042000 Cucumis sativus L. HOM05D004055 ORTHO05D004795 3.4e-12 76.6 126 43.7
AT5G09850 Arabidopsis thaliana HOM05D004055 ORTHO05D004795 4.5e-12 76.3 132 42.4
arahy.Tifrunner.gnm1.ann1.F10EXU Arachis hypogaea HOM05D004055 ORTHO05D004795 4.5e-12 76.3 126 39.7
arahy.Tifrunner.gnm1.ann1.W5F641 Arachis hypogaea HOM05D004055 ORTHO05D004795 4.5e-12 76.3 126 39.7
unitig_899.g14991 Utricularia gibba HOM05D004055 ORTHO05D004795 4.5e-12 76.3 143 41.3
MELO3C008024.2 Cucumis melo HOM05D004055 ORTHO05D004795 5.9e-12 75.9 142 40.1
Aa31LG3G17270 Aethionema arabicum HOM05D004055 ORTHO05D004795 7.7e-12 75.5 134 42.5
HPP92_004417 Vanilla planifolia HOM05D004055 ORTHO05D004795 7.7e-12 75.5 132 43.9
FAN19G0550 Fragaria x ananassa HOM05D004055 ORTHO05D004795 1.0e-11 75.1 121 42.1
FAN23G0659 Fragaria x ananassa HOM05D004055 ORTHO05D004795 1.0e-11 75.1 116 42.2
Hund03496 Selenicereus undatus HOM05D004055 ORTHO05D004795 1.0e-11 75.1 92 47.8
ClCG01G015720 Citrullus lanatus HOM05D004055 ORTHO05D004795 1.3e-11 74.7 142 40.1
QL06p030904 Quercus lobata HOM05D004055 ORTHO05D004795 1.3e-11 74.7 130 40.0
Sc16g0004020 Simmondsia chinensis HOM05D004055 ORTHO05D004795 1.3e-11 74.7 151 38.4
Atru.chr4.588 Acer truncatum HOM05D004055 ORTHO05D004795 1.7e-11 74.3 133 41.4
Manes.12G149500 Manihot esculenta HOM05D004055 ORTHO05D004795 1.7e-11 74.3 130 42.3
Prupe.6G180300 Prunus persica HOM05D004055 ORTHO05D004795 1.7e-11 74.3 133 41.4
PGR119G1730 Punica granatum HOM05D004055 ORTHO05D004795 1.7e-11 74.3 117 47.0
Aqoxy6G00380 Aquilegia oxysepala HOM05D004055 ORTHO05D004795 2.2e-11 73.9 189 32.8
Sed0016858 Sechium edule HOM05D004055 ORTHO05D004795 2.2e-11 73.9 143 39.2
HanXRQChr15g0495911 Helianthus annuus HOM05D004055 ORTHO05D004795 3.8e-11 73.2 128 38.3
Thecc.10G166300 Theobroma cacao HOM05D004055 ORTHO05D004795 3.8e-11 73.2 105 45.7
C09p67670 Brassica napus HOM05D004055 ORTHO05D004795 5.0e-11 72.8 125 42.4
FAN28G2172 Fragaria x ananassa HOM05D004055 ORTHO05D004795 5.0e-11 72.8 121 42.1
PSO541G1884 Papaver somniferum HOM05D004055 ORTHO05D004795 5.0e-11 72.8 158 38.0
PSO675G8047 Papaver somniferum HOM05D004055 ORTHO05D004795 5.0e-11 72.8 153 40.5
SGA_v2.0_scaffold2G01257 Striga asiatica HOM05D004055 ORTHO05D004795 5.0e-11 72.8 82 50.0
A10p27610 Brassica napus HOM05D004055 ORTHO05D004795 8.5e-11 72.0 129 42.6
BraA10t44812Z Brassica rapa HOM05D004055 ORTHO05D004795 8.5e-11 72.0 129 42.6
Hma1.2p1_0282F.1_g113380 Hydrangea macrophylla HOM05D004055 ORTHO05D004795 8.5e-11 72.0 138 38.4
Thecc.01G135000 Theobroma cacao HOM05D004055 ORTHO05D004795 8.5e-11 72.0 117 43.6
Lalb_Chr08g0238691 Lupinus albus HOM05D004055 ORTHO05D004795 1.1e-10 71.6 115 41.7
Duzib264G0984 Durio zibethinus HOM05D004055 ORTHO05D004795 1.4e-10 71.2 82 51.2
RcHm_v2.0_Chr2g0119271 Rosa chinensis HOM05D004055 ORTHO05D004795 1.4e-10 71.2 116 40.5
VMungo1309G1914 Vigna mungo HOM05D004055 ORTHO05D004795 1.4e-10 71.2 126 42.1
COL.COLO4_21459 Corchorus olitorius HOM05D004055 ORTHO05D004795 1.9e-10 70.9 115 45.2
Duzib128G0998 Durio zibethinus HOM05D004055 ORTHO05D004795 1.9e-10 70.9 105 44.8
Lj1g0026829 Lotus japonicus HOM05D004055 ORTHO05D004795 1.9e-10 70.9 97 43.3
Sabra16G0193500 Salix brachista HOM05D004055 ORTHO05D004795 1.9e-10 70.9 147 38.8
arahy.Tifrunner.gnm1.ann1.WFL6TQ Arachis hypogaea HOM05D004055 ORTHO05D004795 2.5e-10 70.5 126 41.3
Carub.0006s0827 Capsella rubella HOM05D004055 ORTHO05D004795 2.5e-10 70.5 249 30.9
Sabra19G0004100 Salix brachista HOM05D004055 ORTHO05D004795 2.5e-10 70.5 123 42.3
Gohir.D04G014600 Gossypium hirsutum HOM05D004055 ORTHO05D004795 3.2e-10 70.1 118 43.2
Gorai.012G017100 Gossypium raimondii HOM05D004055 ORTHO05D004795 3.2e-10 70.1 118 43.2
Lj4g0015873 Lotus japonicus HOM05D004055 ORTHO05D004795 3.2e-10 70.1 127 40.9
Potri.001G307600 Populus trichocarpa HOM05D004055 ORTHO05D004795 3.2e-10 70.1 145 37.9
Glyma.05G187800 Glycine max HOM05D004055 ORTHO05D004795 4.2e-10 69.7 138 36.2
Glyma.08G146000 Glycine max HOM05D004055 ORTHO05D004795 4.2e-10 69.7 129 38.8
Gohir.A05G401200 Gossypium hirsutum HOM05D004055 ORTHO05D004795 4.2e-10 69.7 115 43.5
A03p04290 Brassica napus HOM05D004055 ORTHO05D004795 5.5e-10 69.3 132 38.6
C03p04740 Brassica napus HOM05D004055 ORTHO05D004795 5.5e-10 69.3 132 38.6
BolC3t13008H Brassica oleracea HOM05D004055 ORTHO05D004795 5.5e-10 69.3 132 38.6
Ciclev10025964m.g Citrus clementina HOM05D004055 ORTHO05D004795 5.5e-10 69.3 117 41.9
Dinv14354 Davidia involucrata HOM05D004055 ORTHO05D004795 5.5e-10 69.3 131 39.7
Thhalv10013991m.g Eutrema salsugineum HOM05D004055 ORTHO05D004795 5.5e-10 69.3 247 30.4
Glyma.04G216700 Glycine max HOM05D004055 ORTHO05D004795 7.2e-10 68.9 132 40.9
Glyma.06G149200 Glycine max HOM05D004055 ORTHO05D004795 7.2e-10 68.9 128 40.6
Gohir.A06G175700 Gossypium hirsutum HOM05D004055 ORTHO05D004795 9.4e-10 68.6 116 43.1
Gorai.010G216800 Gossypium raimondii HOM05D004055 ORTHO05D004795 9.4e-10 68.6 116 43.1
Sed0022459 Sechium edule HOM05D004055 ORTHO05D004795 9.4e-10 68.6 132 39.4
AL6G20260 Arabidopsis lyrata HOM05D004055 ORTHO05D004795 2.7e-09 67.0 121 41.3
Gohir.D06G185400 Gossypium hirsutum HOM05D004055 ORTHO05D004795 2.7e-09 67.0 116 42.2
Oeu060358.1 Olea europaea HOM05D001280 ORTHO05D001125 2.7e-09 67.0 70 52.9
THA.LOC104799385 Tarenaya hassleriana HOM05D004055 ORTHO05D004795 2.7e-09 67.0 128 43.0
HanXRQChr09g0259611 Helianthus annuus HOM05D004055 ORTHO05D004795 3.6e-09 66.6 147 37.4
MD01G1024900 Malus domestica HOM05D004055 ORTHO05D004795 3.6e-09 66.6 176 33.5
MD15G1319400 Malus domestica HOM05D004055 ORTHO05D004795 3.6e-09 66.6 279 28.3
MBI17_g17030_MAGBIO Magnolia biondii HOM05D004055 ORTHO05D004795 4.7e-09 66.2 139 38.1
Manes.13G082000 Manihot esculenta HOM05D004055 ORTHO05D004795 4.7e-09 66.2 94 46.8
Medtr3g095380 Medicago truncatula HOM05D004055 ORTHO05D004795 4.7e-09 66.2 117 39.3
Lalb_Chr11g0068211 Lupinus albus HOM05D004055 ORTHO05D004795 6.1e-09 65.9 117 40.2
BraA03t09773Z Brassica rapa HOM05D004055 ORTHO05D004795 1.0e-08 65.1 133 39.1
Phvul.002G268700 Phaseolus vulgaris HOM05D004055 ORTHO05D004795 1.0e-08 65.1 129 36.4
Phvul.009G146900 Phaseolus vulgaris HOM05D004055 ORTHO05D004795 1.0e-08 65.1 127 40.2
Lsat_1_v5_gn_4_139020 Lactuca sativa HOM05D004055 ORTHO05D004795 1.4e-08 64.7 148 35.1
BolC9t59529H Brassica oleracea HOM05D004055 ORTHO05D004795 1.8e-08 64.3 101 42.6
VMungo0251G0876 Vigna mungo HOM05D004055 ORTHO05D004795 2.3e-08 63.9 129 37.2
Cpa.g.sc72.32 Carica papaya HOM05D004055 ORTHO05D004795 5.1e-08 62.8 119 42.0
Ca_16910_v3 Cicer arietinum L. HOM05D004055 ORTHO05D004795 5.1e-08 62.8 90 42.2
Oeu052244.1 Olea europaea HOM05D017117 ORTHO05D290984 5.1e-08 62.8 104 42.3
BcaB08g37176 Brassica carinata HOM05D004055 ORTHO05D004795 6.7e-08 62.4 114 40.4
Lsat_1_v5_gn_5_40301 Lactuca sativa HOM05D004055 ORTHO05D004795 6.7e-08 62.4 153 37.3
Psat5g064600 Pisum sativum HOM05D004055 ORTHO05D004795 6.7e-08 62.4 95 40.0
Dinv15094 Davidia involucrata HOM05D004055 ORTHO05D004795 8.8e-08 62.0 177 31.1
Lalb_Chr23g0272481 Lupinus albus HOM05D004055 ORTHO05D004795 2.6e-07 60.5 135 36.3
Oeu020017.1 Olea europaea HOM05D017117 ORTHO05D005688 2.6e-07 60.5 102 41.2
Sp6g33560 Schrenkiella parvula HOM05D004055 ORTHO05D004795 2.6e-07 60.5 213 29.6
Dinv41077 Davidia involucrata HOM05D004055 ORTHO05D004795 4.4e-07 59.7 85 43.5
TPR.G18732 Trifolium pratense HOM05D004055 ORTHO05D004795 4.4e-07 59.7 129 36.4
arahy.Tifrunner.gnm1.ann1.GWIQ86 Arachis hypogaea HOM05D004055 ORTHO05D004795 5.7e-07 59.3 91 44.0
Gorai.009G296400 Gossypium raimondii HOM05D004055 ORTHO05D004795 7.4e-07 58.9 117 40.2
Peaxi162Scf00025g02619 Petunia axillaris HOM05D004055 ORTHO05D004795 1.7e-06 57.8 77 44.2
Oeu011079.1 Olea europaea HOM05D017117 ORTHO05D025954 2.2e-06 57.4 27 96.3
CDE08G1219 Ceratophyllum demersum HOM05D004055 ORTHO05D004795 2.8e-06 57.0 92 41.3
arahy.Tifrunner.gnm1.ann1.PLK8LK Arachis hypogaea HOM05D003363 ORTHO05D003952 6.3e-06 55.8 82 40.2
Gohir.D05G282900 Gossypium hirsutum HOM05D004055 ORTHO05D004795 6.3e-06 55.8 117 39.3


User provided reference genes

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