Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 3.4e-272 941.0 469 100.0
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 6.6e-223 777.3 469 82.3
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 1.1e-222 776.5 469 81.7
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 4.7e-221 771.2 469 80.0
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 2.2e-218 762.3 468 77.1
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 1.6e-213 746.1 468 77.1
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 3.6e-213 745.0 468 76.3
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 4.9e-210 734.6 468 74.6
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 5.4e-209 731.1 468 74.6
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 1.2e-208 729.9 468 74.1
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 1.6e-208 729.6 468 75.4
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 2.7e-208 728.8 465 74.4
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 3.9e-207 724.9 468 73.3
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 1.5e-206 723.0 468 74.1
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 1.5e-206 723.0 468 73.7
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.9e-206 722.6 468 74.1
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 2.5e-206 722.2 468 72.9
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 2.5e-206 722.2 468 73.9
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 3.6e-205 718.4 468 73.7
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 6.2e-205 717.6 469 73.3
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 6.8e-204 714.1 468 73.7
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 7.0e-201 704.1 469 72.9
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 5.1e-199 698.0 467 71.9
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 6.6e-199 697.6 467 71.5
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 6.6e-199 697.6 468 72.6
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 1.1e-198 696.8 447 76.5
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 2.1e-197 692.6 469 72.1
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 2.8e-197 692.2 467 70.7
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 3.6e-197 691.8 467 71.9
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 6.2e-197 691.0 469 71.0
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 8.1e-197 690.6 468 70.7
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 1.4e-196 689.9 470 69.6
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 1.2e-195 686.8 444 74.3
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 1.2e-195 686.8 468 71.4
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 1.2e-195 686.8 468 71.2
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 4.1e-193 678.3 469 70.1
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 4.1e-193 678.3 469 70.1
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 1.2e-192 676.8 469 70.1
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 1.2e-192 676.8 469 70.1
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 2.1e-192 676.0 483 68.3
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 2.1e-192 676.0 483 68.3
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 2.1e-192 676.0 483 68.3
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 3.5e-192 675.2 469 69.9
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 4.6e-192 674.9 469 69.9
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 1.3e-191 673.3 458 71.4
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 1.3e-191 673.3 468 69.9
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 3.9e-191 671.8 468 69.0
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 8.6e-191 670.6 469 69.3
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 1.5e-190 669.8 468 68.6
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 2.5e-190 669.1 474 68.8
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 4.3e-190 668.3 468 69.4
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 4.3e-190 668.3 468 68.6
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.6e-190 667.9 483 68.1
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 9.5e-190 667.2 467 67.2
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 4.7e-189 664.8 518 64.5
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 6.2e-189 664.5 468 68.8
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 1.8e-188 662.9 467 69.0
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 2.4e-188 662.5 518 64.5
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 3.1e-188 662.1 454 70.7
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 4.0e-188 661.8 467 67.9
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 1.5e-187 659.8 467 69.2
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 2.0e-187 659.4 455 67.7
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 2.6e-187 659.1 501 65.5
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 9.9e-187 657.1 496 68.1
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 2.2e-186 656.0 476 69.3
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 7.1e-185 651.0 470 68.1
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 9.2e-185 650.6 408 76.2
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 2.7e-184 649.0 471 67.3
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 4.6e-184 648.3 468 67.3
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 4.3e-182 641.7 469 66.3
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 7.3e-182 641.0 445 74.4
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 2.4e-180 636.0 411 75.7
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 9.0e-180 634.0 460 66.5
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 1.2e-179 633.6 456 68.4
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 2.4e-177 625.9 585 56.9
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 1.7e-175 619.8 468 64.1
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 6.2e-173 611.3 498 61.2
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 4.0e-172 608.6 468 65.4
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 2.0e-171 606.3 478 63.8
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 2.9e-170 602.4 494 62.3
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 1.0e-167 594.0 469 64.0
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 1.9e-166 589.7 468 60.7
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 6.2e-165 584.7 426 66.9
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 3.9e-159 565.5 390 71.5
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 3.3e-158 562.4 486 59.5
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 2.1e-157 559.7 394 68.3
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 1.3e-151 540.4 491 55.6
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 2.5e-150 536.2 396 65.7
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 3.6e-144 515.8 470 58.7
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 8.8e-143 511.1 307 82.4
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 9.7e-142 507.7 468 55.6
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 6.3e-141 505.0 468 53.6
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 6.9e-140 501.5 470 51.9
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 4.5e-139 498.8 308 81.2
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 2.5e-137 493.0 469 51.6
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 5.1e-135 485.3 307 78.2
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 4.2e-129 465.7 663 42.8
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 6.7e-127 458.4 508 51.6
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 7.4e-126 454.9 961 34.7
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 1.7e-125 453.8 427 53.2
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 1.6e-123 447.2 469 52.9
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 9.4e-121 438.0 312 71.2
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 4.7e-112 409.1 347 59.1
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 3.5e-107 392.9 477 49.9
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 8.9e-95 351.7 418 50.0
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 1.5e-89 334.3 251 65.7
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 6.2e-72 275.8 535 35.0
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.7e-66 257.7 174 73.6
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 3.0e-66 256.9 285 53.7
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 9.0e-63 245.4 477 35.0
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 4.9e-61 239.6 183 60.7
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 8.7e-58 228.8 161 67.7
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.3e-55 219.5 174 64.4
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 1.3e-45 188.3 161 62.7
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 3.9e-42 176.8 113 68.1
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 2.2e-29 134.4 91 73.6
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 2.9e-29 134.0 150 47.3
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 4.5e-22 110.2 80 70.0
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 1.7e-16 91.7 66 68.2
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 2.2e-16 91.3 44 86.4
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.1e-15 89.0 101 47.5
Cc02_g25220 Coffea canephora HOM05D006213 ORTHO05D008107 1.6e-14 85.1 48 77.1
Migut.B01510 Erythranthe guttata HOM05D006213 ORTHO05D003423 4.5e-14 83.6 43 83.7
arahy.Tifrunner.gnm1.ann1.PL2W5K Arachis hypogaea HOM05D006213 ORTHO05D008107 3.2e-12 77.4 82 40.2
Atru.chr5.109 Acer truncatum HOM05D006213 ORTHO05D000044 8.8e-10 69.3 57 56.1
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 2.2e-08 64.7 231 25.5
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 9.1e-07 59.3 310 26.1
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 9.1e-07 59.3 230 26.1
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 4.5e-06 57.0 284 26.1
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 7.7e-06 56.2 237 26.2


User provided reference genes

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