Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 5.7e-84 314.3 171 100.0
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 1.4e-66 256.5 169 85.2
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.3e-56 223.4 156 76.9
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 3.3e-55 218.8 163 74.2
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 8.1e-54 214.2 153 73.9
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 2.3e-53 212.6 165 70.9
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.3e-53 212.6 169 69.8
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 4.0e-53 211.8 161 72.7
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 1.5e-52 209.9 161 74.5
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.5e-52 209.9 149 76.5
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 3.4e-52 208.8 150 74.7
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 3.4e-52 208.8 150 74.7
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 5.8e-52 208.0 165 72.1
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 7.6e-52 207.6 144 78.5
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 1.7e-51 206.5 147 73.5
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 3.7e-51 205.3 164 71.3
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 8.3e-51 204.1 160 71.9
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 8.3e-51 204.1 161 72.7
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 2.4e-50 202.6 161 68.3
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 5.4e-50 201.4 152 72.4
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 7.1e-50 201.1 150 72.0
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 1.2e-49 200.3 168 69.0
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 1.2e-49 200.3 163 69.3
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 1.6e-49 199.9 153 73.9
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 2.1e-49 199.5 158 70.3
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.1e-49 199.5 158 70.3
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.7e-49 199.1 164 70.1
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 3.5e-49 198.7 158 69.6
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 7.8e-49 197.6 149 72.5
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.7e-48 196.4 163 69.3
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.7e-48 196.4 158 69.0
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 2.3e-48 196.1 152 70.4
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 3.9e-48 195.3 143 74.1
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 5.1e-48 194.9 166 67.5
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 6.6e-48 194.5 162 69.1
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 1.5e-47 193.4 167 68.3
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.5e-47 193.4 147 71.4
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 2.5e-47 192.6 162 68.5
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 2.5e-47 192.6 152 71.1
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 2.5e-47 192.6 152 71.1
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 3.3e-47 192.2 162 67.9
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 5.6e-47 191.4 139 74.1
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 7.3e-47 191.0 164 67.7
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 9.6e-47 190.7 153 71.2
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 9.6e-47 190.7 153 70.6
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 9.6e-47 190.7 170 65.9
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 1.6e-46 189.9 167 65.3
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 1.6e-46 189.9 164 67.7
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 2.1e-46 189.5 152 69.7
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.4e-45 186.0 181 61.3
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 9.9e-44 180.6 167 63.5
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 1.7e-43 179.9 170 64.7
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 2.2e-43 179.5 165 61.8
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 2.2e-43 179.5 161 63.4
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 3.8e-43 178.7 128 77.3
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.1e-42 177.2 169 62.1
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 1.1e-42 177.2 144 70.1
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 2.4e-42 176.0 159 62.9
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 3.2e-42 175.6 146 62.3
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 3.2e-42 175.6 165 66.1
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 3.2e-42 175.6 145 69.0
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 5.4e-42 174.9 164 65.2
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 5.4e-42 174.9 146 62.3
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 7.1e-42 174.5 146 68.5
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 7.1e-42 174.5 146 68.5
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 9.3e-42 174.1 145 65.5
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.2e-41 173.7 155 63.2
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 2.1e-41 172.9 151 66.2
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 2.1e-41 172.9 144 68.1
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 2.7e-41 172.6 130 69.2
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 2.7e-41 172.6 147 68.7
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 2.7e-41 172.6 163 62.6
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 3.5e-41 172.2 167 62.3
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 1.0e-40 170.6 153 65.4
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.0e-40 170.6 148 64.2
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 1.0e-40 170.6 164 61.0
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 1.3e-40 170.2 151 64.9
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 1.3e-40 170.2 134 67.2
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 1.3e-40 170.2 166 62.0
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 1.3e-40 170.2 151 64.9
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 1.7e-40 169.9 159 62.9
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 1.7e-40 169.9 159 62.9
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.7e-40 169.9 163 60.7
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 2.3e-40 169.5 146 68.5
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 3.0e-40 169.1 122 75.4
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 3.0e-40 169.1 122 75.4
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 3.0e-40 169.1 122 75.4
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 3.0e-40 169.1 149 67.8
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 6.6e-40 167.9 163 62.0
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 6.6e-40 167.9 126 71.4
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 8.7e-40 167.5 118 78.8
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 1.1e-39 167.2 151 64.2
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 1.1e-39 167.2 151 64.2
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.1e-39 167.2 168 60.1
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.9e-39 166.4 168 60.1
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 4.3e-39 165.2 151 66.2
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 4.3e-39 165.2 146 65.1
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 9.6e-39 164.1 165 63.0
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 9.6e-39 164.1 152 64.5
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.3e-38 163.7 157 61.1
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 2.1e-38 162.9 150 66.0
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 2.1e-38 162.9 153 61.4
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 8.1e-38 161.0 149 62.4
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 4.0e-37 158.7 164 56.7
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.2e-36 157.1 180 54.4
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 1.5e-36 156.8 119 71.4
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 2.0e-36 156.4 148 62.8
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 1.6e-33 146.7 163 55.2
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 2.7e-33 146.0 173 51.4
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.1e-29 134.0 250 40.4
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 1.8e-29 133.3 107 67.3
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 1.8e-29 133.3 108 65.7
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 7.6e-28 127.9 122 60.7
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 1.7e-27 126.7 179 49.2
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 6.4e-27 124.8 328 34.8
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 8.4e-27 124.4 176 48.3
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 1.3e-24 117.1 156 48.1
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 2.3e-24 116.3 179 46.4
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.5e-23 112.8 141 48.9
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 1.5e-20 103.6 78 66.7
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 2.2e-19 99.8 100 61.0
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 2.5e-18 96.3 94 63.8
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 5.5e-18 95.1 79 62.0
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 6.7e-16 88.2 65 70.8
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 1.9e-15 86.7 144 41.0
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 5.3e-13 78.6 68 67.6
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 3.4e-12 75.9 88 45.5
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 2.1e-09 66.6 75 57.3
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 2.7e-09 66.2 53 67.9
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 4.6e-09 65.5 119 42.0


User provided reference genes

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