Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 4.2e-144 514.6 248 100.0
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 2.1e-39 166.8 254 42.9
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 2.6e-37 159.8 282 37.6
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 3.0e-33 146.4 240 40.8
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 3.0e-33 146.4 220 44.5
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 8.7e-33 144.8 241 40.7
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 2.8e-31 139.8 252 38.5
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 7.6e-29 131.7 245 40.4
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 1.1e-27 127.9 239 36.8
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.1e-27 127.9 243 37.9
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.1e-27 127.9 243 37.9
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 1.4e-27 127.5 241 40.2
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.4e-27 127.5 243 38.3
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.5e-27 126.7 242 37.6
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 2.5e-27 126.7 259 37.5
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 4.2e-27 125.9 238 39.5
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 4.6e-26 122.5 243 37.0
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 5.1e-25 119.0 244 36.1
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 5.1e-25 119.0 240 39.2
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 8.7e-25 118.2 236 36.9
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 2.5e-24 116.7 240 38.3
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.8e-22 110.5 240 35.8
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 1.8e-22 110.5 244 37.3
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 2.4e-22 110.2 240 38.3
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 2.4e-22 110.2 239 37.2
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 4.1e-22 109.4 239 35.6
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 5.3e-22 109.0 255 32.9
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 9.0e-22 108.2 240 36.7
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.5e-21 107.5 240 38.8
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.3e-20 104.4 241 33.6
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.3e-20 104.4 256 33.6
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.7e-20 104.0 247 34.0
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 5.0e-20 102.4 251 33.1
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.1e-19 101.3 234 37.6
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 2.5e-19 100.1 240 37.9
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 3.2e-19 99.8 217 37.3
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 7.2e-19 98.6 244 36.5
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 2.1e-18 97.1 244 33.2
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.6e-18 95.9 238 37.0
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 6.1e-18 95.5 239 33.1
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 7.9e-18 95.1 199 35.7
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 5.1e-17 92.4 244 36.1
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 8.8e-17 91.7 218 34.9
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.1e-16 91.3 246 36.2
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.1e-16 91.3 245 34.7
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.1e-16 91.3 213 35.7
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.5e-16 90.9 238 35.3
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.5e-16 90.9 238 35.3
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 3.3e-16 89.7 226 32.3
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 1.3e-15 87.8 258 34.5
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.7e-15 87.4 245 34.3
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 8.2e-15 85.1 223 31.8
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.8e-14 84.0 292 30.8
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.4e-14 83.6 241 32.0
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 3.1e-14 83.2 219 36.5
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 4.1e-14 82.8 239 31.4
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 4.1e-14 82.8 249 33.7
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 3.4e-13 79.7 243 33.3
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.0e-12 78.2 235 33.2
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.7e-12 77.4 240 30.4
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 5.5e-11 72.4 207 32.4
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 5.5e-11 72.4 217 29.0
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 2.7e-10 70.1 106 45.3
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.4e-09 67.8 206 34.0
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 2.0e-08 63.9 251 27.5
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 7.4e-08 62.0 108 41.7
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 4.8e-07 59.3 242 27.3
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 1.8e-06 57.4 73 50.7
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 3.1e-06 56.6 209 32.1
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 3.1e-06 56.6 230 27.8
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 4.1e-06 56.2 213 30.0
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 4.1e-06 56.2 85 47.1
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 7.0e-06 55.5 201 28.9


User provided reference genes

Program Settings