Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 2.0e-71 272.3 137 100.0
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 3.2e-45 185.3 120 75.0
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 7.9e-44 180.6 121 72.7
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 7.9e-44 180.6 132 70.5
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 5.1e-43 177.9 121 76.9
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 5.7e-42 174.5 126 72.2
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 7.4e-42 174.1 143 65.7
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 6.3e-41 171.0 131 64.9
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 8.2e-41 170.6 126 69.8
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.1e-40 170.2 137 64.2
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.1e-40 170.2 137 64.2
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.1e-40 170.2 137 64.2
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.1e-40 170.2 137 64.2
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.1e-40 170.2 139 64.0
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-40 169.5 137 64.2
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.4e-40 169.1 137 64.2
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 2.4e-40 169.1 114 73.7
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.1e-40 168.7 137 63.5
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.1e-40 168.7 137 63.5
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 5.3e-40 167.9 127 67.7
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 9.1e-40 167.2 137 63.5
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 2.6e-39 165.6 124 66.1
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.4e-39 165.2 137 62.8
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 4.5e-39 164.9 119 69.7
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 5.9e-39 164.5 126 66.7
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 7.7e-39 164.1 110 74.5
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 1.3e-38 163.3 142 62.0
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-38 163.3 144 61.1
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 1.3e-38 163.3 128 66.4
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 2.2e-38 162.5 123 65.0
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.9e-38 162.2 126 64.3
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 2.9e-38 162.2 121 70.2
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 8.5e-38 160.6 108 75.9
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.5e-37 159.1 137 61.3
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.2e-37 158.7 137 62.0
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.2e-37 158.7 137 61.3
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 4.2e-37 158.3 135 60.0
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 7.2e-37 157.5 118 65.3
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 7.2e-37 157.5 124 66.1
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 7.2e-37 157.5 114 70.2
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 1.2e-36 156.8 120 65.8
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.6e-36 156.4 137 60.6
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 2.7e-36 155.6 121 64.5
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 3.0e-35 152.1 124 64.5
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 3.0e-35 152.1 147 58.5
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 3.0e-35 152.1 121 63.6
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 5.1e-35 151.4 110 72.7
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 5.1e-35 151.4 135 59.3
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.1e-35 151.4 112 69.6
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 5.1e-35 151.4 135 61.5
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 6.7e-35 151.0 130 60.8
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 8.8e-35 150.6 131 59.5
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 1.5e-34 149.8 137 60.6
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.5e-34 149.8 125 58.4
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 1.5e-34 149.8 122 64.8
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 2.0e-34 149.4 134 58.2
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 3.3e-34 148.7 121 62.8
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 5.7e-34 147.9 128 58.6
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 7.4e-34 147.5 115 65.2
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 2.8e-33 145.6 129 59.7
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 3.7e-33 145.2 126 59.5
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 6.3e-33 144.4 120 64.2
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 7.0e-32 141.0 123 61.0
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 2.0e-31 139.4 132 56.8
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 2.0e-31 139.4 138 55.8
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 2.6e-31 139.0 125 55.2
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 2.6e-31 139.0 141 55.3
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 2.6e-31 139.0 121 60.3
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 4.5e-31 138.3 165 48.5
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 1.7e-30 136.3 131 56.5
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 2.2e-30 136.0 128 60.2
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.9e-29 132.9 120 60.8
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 3.2e-29 132.1 134 55.2
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 3.2e-29 132.1 134 55.2
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 3.6e-28 128.6 117 54.7
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 3.0e-27 125.6 96 62.5
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 8.8e-27 124.0 121 55.4
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 1.5e-26 123.2 129 51.2
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 2.0e-26 122.9 123 53.7
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-26 122.5 93 63.4
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 4.4e-26 121.7 142 45.1
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 4.4e-26 121.7 122 51.6
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 5.7e-26 121.3 120 56.7
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 5.7e-26 121.3 117 52.1
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 1.7e-25 119.8 136 51.5
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 7.0e-24 114.4 112 53.6
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.0e-24 114.4 93 61.3
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 9.1e-24 114.0 121 52.1
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 9.1e-24 114.0 109 56.9
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 9.1e-24 114.0 90 62.2
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 1.2e-23 113.6 91 62.6
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 1.6e-23 113.2 222 35.6
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 1.0e-22 110.5 117 54.7
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 1.7e-22 109.8 109 54.1
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 1.7e-22 109.8 126 54.0
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 6.5e-22 107.8 109 54.1
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 6.5e-22 107.8 110 55.5
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 6.5e-22 107.8 118 47.5
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 8.5e-22 107.5 126 49.2
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 1.1e-21 107.1 118 52.5
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 1.1e-21 107.1 119 52.1
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 3.2e-21 105.5 108 56.5
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 4.2e-21 105.1 92 55.4
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 5.5e-21 104.8 117 48.7
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 9.4e-21 104.0 118 51.7
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 1.2e-20 103.6 126 46.8
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 2.1e-20 102.8 128 48.4
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 4.7e-20 101.7 107 54.2
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 8.0e-20 100.9 108 53.7
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 3.0e-19 99.0 78 62.8
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 4.0e-19 98.6 132 49.2
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 8.8e-19 97.4 102 50.0
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 1.2e-18 97.1 119 44.5
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 9.7e-18 94.0 79 60.8
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 1.3e-17 93.6 71 62.0
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.7e-17 93.2 107 49.5
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 1.7e-17 93.2 107 46.7
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 3.7e-17 92.0 108 48.1
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.8e-16 89.7 73 67.1
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 3.1e-16 89.0 93 47.3
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 1.0e-14 84.0 80 53.8
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 1.3e-14 83.6 60 65.0
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 8.5e-14 80.9 98 51.0
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 1.9e-13 79.7 117 43.6
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 9.4e-13 77.4 114 37.7
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 3.6e-12 75.5 80 48.8
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 4.0e-11 72.0 132 34.8
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 9.8e-10 67.4 65 52.3
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 3.7e-09 65.5 50 64.0
CsaV3_2G034140 Cucumis sativus L. HOM05D003646 ORTHO05D004503 8.3e-09 64.3 49 63.3
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.8e-08 63.2 50 62.0
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 2.4e-08 62.8 56 60.7
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 5.4e-08 61.6 73 43.8
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 7.0e-08 61.2 73 43.8
RcHm_v2.0_Chr5g0034431 Rosa chinensis HOM05D005439 ORTHO05D006793 1.2e-07 60.5 56 53.6
AUR62029363 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.0e-07 59.7 49 55.1


User provided reference genes

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