Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 3.4e-66 255.0 142 100.0
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 1.4e-64 249.6 142 97.9
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 1.4e-38 163.3 93 100.0
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 6.1e-15 84.7 143 42.7
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.0e-14 82.0 141 48.9
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.3e-12 77.0 136 41.2
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.1e-11 73.9 141 36.2
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 3.1e-11 72.4 137 36.5
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 9.2e-11 70.9 146 45.9
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 9.2e-11 70.9 145 45.5
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 9.2e-11 70.9 151 35.1
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 1.2e-10 70.5 142 34.5
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.2e-10 70.5 140 35.0
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.6e-10 70.1 150 44.0
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 2.0e-10 69.7 138 35.5
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.0e-10 69.7 139 37.4
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 3.5e-10 68.9 140 35.7
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 4.5e-10 68.6 146 36.3
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 7.8e-10 67.8 146 34.2
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 1.0e-09 67.4 143 37.1
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 1.0e-09 67.4 144 33.3
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.0e-09 67.4 139 36.0
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.7e-09 66.6 137 35.0
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 2.9e-09 65.9 137 44.5
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 2.9e-09 65.9 148 34.5
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.9e-09 65.9 139 36.0
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 3.8e-09 65.5 143 37.1
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.8e-09 65.5 143 37.1
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.8e-09 65.5 143 37.1
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 5.0e-09 65.1 141 36.2
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 5.0e-09 65.1 151 31.1
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 5.0e-09 65.1 139 46.0
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 6.6e-09 64.7 139 34.5
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 1.1e-08 63.9 152 32.2
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.1e-08 63.9 139 33.1
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.5e-08 63.5 143 37.1
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.9e-08 63.2 139 34.5
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.9e-08 63.2 139 32.4
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.5e-08 62.8 139 34.5
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 2.5e-08 62.8 157 32.5
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 2.5e-08 62.8 145 34.5
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 3.3e-08 62.4 142 33.1
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 4.3e-08 62.0 154 33.1
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 5.6e-08 61.6 141 34.0
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 9.5e-08 60.8 141 34.0
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.6e-07 60.1 141 34.0
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 1.6e-07 60.1 141 34.8
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 3.6e-07 58.9 144 35.4
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 3.6e-07 58.9 133 35.3
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 4.7e-07 58.5 139 30.9
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 6.1e-07 58.2 138 39.9
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 6.1e-07 58.2 144 35.4
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 8.0e-07 57.8 57 47.4
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 8.0e-07 57.8 139 31.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.0e-06 57.4 142 30.3
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.0e-06 57.4 158 29.1
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.8e-06 56.6 138 39.1
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.8e-06 56.6 161 28.6
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.3e-06 56.2 146 30.8
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.3e-06 56.2 136 31.6
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 3.0e-06 55.8 144 29.9
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 3.0e-06 55.8 38 57.9
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 3.0e-06 55.8 149 34.2
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 3.0e-06 55.8 29 75.9
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 4.0e-06 55.5 136 34.6
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 4.0e-06 55.5 31 67.7
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 5.2e-06 55.1 144 30.6
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 5.2e-06 55.1 137 32.8
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 6.8e-06 54.7 144 29.9
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 6.8e-06 54.7 32 62.5
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 8.9e-06 54.3 144 30.6


User provided reference genes

Program Settings