Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037201.1 Olea europaea HOM05D000254 ORTHO05D000165 2.4e-59 231.9 110 100.0
Oeu040560.1 Olea europaea HOM05D000254 ORTHO05D000165 1.2e-21 106.7 57 82.5
Oeu017580.1 Olea europaea HOM05D000254 ORTHO05D000165 4.3e-16 88.2 54 87.0
Oeu023369.1 Olea europaea HOM05D000254 ORTHO05D000165 1.1e-11 73.6 59 50.8
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 1.4e-11 73.2 75 45.3
arahy.Tifrunner.gnm1.ann1.HH8KKF Arachis hypogaea HOM05D000254 ORTHO05D000165 7.1e-11 70.9 65 49.2
arahy.Tifrunner.gnm1.ann1.Q3MTCJ Arachis hypogaea HOM05D000254 ORTHO05D000165 7.1e-11 70.9 65 49.2
arahy.Tifrunner.gnm1.ann1.T4IM50 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.1e-11 70.9 65 49.2
arahy.Tifrunner.gnm1.ann1.4IK5SR Arachis hypogaea HOM05D000254 ORTHO05D000165 1.2e-10 70.1 65 47.7
arahy.Tifrunner.gnm1.ann1.H07TP5 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.6e-10 69.7 65 49.2
arahy.Tifrunner.gnm1.ann1.REY47L Arachis hypogaea HOM05D000254 ORTHO05D000165 2.7e-10 68.9 65 47.7
arahy.Tifrunner.gnm1.ann1.ZHV4UG Arachis hypogaea HOM05D000254 ORTHO05D000165 6.0e-10 67.8 65 47.7
CSS0027448 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.0e-10 67.8 73 43.8
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 6.0e-10 67.8 86 43.0
FvH4_4g08751 Fragaria vesca HOM05D000254 ORTHO05D000165 7.8e-10 67.4 92 40.2
arahy.Tifrunner.gnm1.ann1.WE7X6Y Arachis hypogaea HOM05D000254 ORTHO05D000165 1.3e-09 66.6 59 49.2
arahy.Tifrunner.gnm1.ann1.TUZY7Z Arachis hypogaea HOM05D000254 ORTHO05D000165 1.7e-09 66.2 65 46.2
arahy.Tifrunner.gnm1.ann1.9Z3MNM Arachis hypogaea HOM05D000254 ORTHO05D000165 2.3e-09 65.9 85 37.6
CSS0044872 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.3e-09 65.9 77 45.5
arahy.Tifrunner.gnm1.ann1.B9TG8T Arachis hypogaea HOM05D000254 ORTHO05D000165 3.0e-09 65.5 51 54.9
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 3.0e-09 65.5 86 40.7
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 3.0e-09 65.5 86 40.7
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 3.0e-09 65.5 86 40.7
arahy.Tifrunner.gnm1.ann1.XB47SY Arachis hypogaea HOM05D000254 ORTHO05D000165 3.9e-09 65.1 65 46.2
CARHR292680 Cardamine hirsuta HOM05D000254 ORTHO05D000165 5.1e-09 64.7 55 52.7
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.7e-09 63.9 66 43.9
CANSAT78G1301 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-08 63.5 76 42.1
Aqoxy4G01821 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 1.5e-08 63.2 55 50.9
MD12G1083800 Malus domestica HOM05D000254 ORTHO05D000165 1.5e-08 63.2 103 36.9
Oeu020155.1 Olea europaea HOM05D000254 ORTHO05D000165 1.5e-08 63.2 59 44.1
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.9e-08 62.8 63 44.4
Manes.18G128060 Manihot esculenta HOM05D000254 ORTHO05D000165 1.9e-08 62.8 82 40.2
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 1.9e-08 62.8 60 48.3
SGA_v2.0_scaffold19G08785 Striga asiatica HOM05D000254 ORTHO05D000165 1.9e-08 62.8 99 37.4
arahy.Tifrunner.gnm1.ann1.A30LRN Arachis hypogaea HOM05D000254 ORTHO05D000165 2.5e-08 62.4 65 44.6
Thhalv10022584m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.5e-08 62.4 60 46.7
TPR.G40112 Trifolium pratense HOM05D000254 ORTHO05D000165 2.5e-08 62.4 72 37.5
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.3e-08 62.0 60 46.7
Ciclev10024121m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.3e-08 61.6 66 40.9
Manes.06G094750 Manihot esculenta HOM05D000254 ORTHO05D000165 4.3e-08 61.6 53 49.1
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 4.3e-08 61.6 77 41.6
THA.LOC104827361 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 4.3e-08 61.6 77 41.6
TWI31G1367 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 4.3e-08 61.6 66 42.4
Aqoxy1G03125 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 5.6e-08 61.2 62 46.8
Manes.13G077742 Manihot esculenta HOM05D000254 ORTHO05D000165 5.6e-08 61.2 53 49.1
Ciclev10030070m.g Citrus clementina HOM05D000254 ORTHO05D000165 7.3e-08 60.8 66 42.4
Manes.06G094801 Manihot esculenta HOM05D000254 ORTHO05D000165 7.3e-08 60.8 82 39.0
Manes.10G094000 Manihot esculenta HOM05D000254 ORTHO05D000165 7.3e-08 60.8 82 39.0
Manes.14G115828 Manihot esculenta HOM05D000254 ORTHO05D000165 7.3e-08 60.8 82 39.0
Oeu001568.1 Olea europaea HOM05D000254 ORTHO05D000165 7.3e-08 60.8 56 50.0
Oeu016858.1 Olea europaea HOM05D000254 ORTHO05D000165 7.3e-08 60.8 31 80.6
PSO782G0797 Papaver somniferum HOM05D000254 ORTHO05D000165 7.3e-08 60.8 81 38.3
TWI31G0240 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 7.3e-08 60.8 66 42.4
Glyma.U031215 Glycine max HOM05D000254 ORTHO05D000165 9.6e-08 60.5 59 44.1
HanXRQChr09g0270721 Helianthus annuus HOM05D000254 ORTHO05D000165 9.6e-08 60.5 95 37.9
PSO765G0063 Papaver somniferum HOM05D000254 ORTHO05D000165 9.6e-08 60.5 81 39.5
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 9.6e-08 60.5 90 40.0
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.3e-07 60.1 73 39.7
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.3e-07 60.1 79 39.2
Manes.10G056233 Manihot esculenta HOM05D000254 ORTHO05D000165 1.3e-07 60.1 82 39.0
Oeu007944.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-07 60.1 54 48.1
Oeu026773.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-07 60.1 55 47.3
Oeu051221.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-07 60.1 31 71.0
TPR.G208 Trifolium pratense HOM05D000254 ORTHO05D000165 1.3e-07 60.1 92 34.8
CARHR261160 Cardamine hirsuta HOM05D000254 ORTHO05D000165 1.6e-07 59.7 60 46.7
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 1.6e-07 59.7 92 35.9
Manes.16G054463 Manihot esculenta HOM05D000254 ORTHO05D000165 1.6e-07 59.7 53 47.2
Oeu001455.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-07 59.7 57 47.4
Oeu018287.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-07 59.7 57 47.4
Oeu050425.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-07 59.7 57 47.4
Oeu055846.1 Olea europaea HOM05D000254 ORTHO05D000165 2.1e-07 59.3 57 47.4
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 2.1e-07 59.3 108 34.3
SGA_v2.0_scaffold3G01776 Striga asiatica HOM05D000254 ORTHO05D000165 2.1e-07 59.3 90 36.7
Oeu024488.1 Olea europaea HOM05D000254 ORTHO05D000165 2.8e-07 58.9 55 45.5
Aqoxy7G02513 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 3.6e-07 58.5 63 42.9
arahy.Tifrunner.gnm1.ann1.E4BE46 Arachis hypogaea HOM05D000254 ORTHO05D019825 3.6e-07 58.5 65 44.6
CANSAT34G0001 Cannabis sativa HOM05D000254 ORTHO05D000165 3.6e-07 58.5 68 36.8
Oeu014787.1 Olea europaea HOM05D000254 ORTHO05D000165 3.6e-07 58.5 56 44.6
Ciclev10023755m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.8e-07 58.2 66 39.4
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 4.8e-07 58.2 69 39.1
Manes.16G058300 Manihot esculenta HOM05D000254 ORTHO05D000165 4.8e-07 58.2 53 47.2
PSO170G0724 Papaver somniferum HOM05D000254 ORTHO05D000165 4.8e-07 58.2 81 39.5
TWI73G1180 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 4.8e-07 58.2 69 42.0
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 6.2e-07 57.8 92 34.8
Manes.16G056325 Manihot esculenta HOM05D000254 ORTHO05D000165 6.2e-07 57.8 82 37.8
PSO170G5876 Papaver somniferum HOM05D000254 ORTHO05D000165 8.1e-07 57.4 81 39.5
PSO063G1844 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-06 57.0 71 43.7
PSO339G4772 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-06 57.0 87 39.1
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-06 57.0 87 39.1
Sopen09g021430 Solanum pennellii HOM05D000254 ORTHO05D000165 1.1e-06 57.0 83 34.9
Sopen09g021130 Solanum pennellii HOM05D000254 ORTHO05D000165 1.4e-06 56.6 86 34.9
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.4e-06 56.6 75 38.7
CSS0007203 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.8e-06 56.2 86 34.9
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 1.8e-06 56.2 95 37.9
Sopen11g008380 Solanum pennellii HOM05D000254 ORTHO05D000165 1.8e-06 56.2 84 36.9
Ciclev10000580m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.4e-06 55.8 62 38.7
RcHm_v2.0_Chr3g0453661 Rosa chinensis HOM05D000254 ORTHO05D000165 2.4e-06 55.8 84 36.9
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 3.1e-06 55.5 64 40.6
CANSAT54G2521 Cannabis sativa HOM05D000254 ORTHO05D000165 3.1e-06 55.5 64 40.6
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.1e-06 55.5 62 38.7
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.1e-06 55.5 62 38.7
Thhalv10002181m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.1e-06 55.5 53 45.3
Thhalv10002288m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.1e-06 55.5 67 40.3
Oeu003644.1 Olea europaea HOM05D000254 ORTHO05D000165 3.1e-06 55.5 56 46.4
PSO675G4278 Papaver somniferum HOM05D000254 ORTHO05D000165 4.0e-06 55.1 33 72.7
RcHm_v2.0_Chr5g0062621 Rosa chinensis HOM05D000254 ORTHO05D000165 4.0e-06 55.1 82 37.8
Solyc05g045690.1 Solanum lycopersicum HOM05D000254 ORTHO05D000165 4.0e-06 55.1 84 34.5
BolC4t24868H Brassica oleracea HOM05D000254 ORTHO05D000165 5.3e-06 54.7 63 39.7
CSS0011566 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.3e-06 54.7 48 45.8
HanXRQChr09g0243451 Helianthus annuus HOM05D000254 ORTHO05D000165 5.3e-06 54.7 65 38.5
Ciclev10010399m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.9e-06 54.3 37 56.8
Ciclev10033576m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.9e-06 54.3 55 43.6
Oeu035617.1 Olea europaea HOM05D000254 ORTHO05D000165 6.9e-06 54.3 31 67.7
Oeu046850.1 Olea europaea HOM05D000254 ORTHO05D000165 6.9e-06 54.3 52 40.4
CSS0009137 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.0e-06 53.9 53 39.6
Lj3g0010857 Lotus japonicus HOM05D000254 ORTHO05D000165 9.0e-06 53.9 59 44.1
Oeu059068.1 Olea europaea HOM05D000254 ORTHO05D000165 9.0e-06 53.9 55 43.6
PSO063G1384 Papaver somniferum HOM05D000254 ORTHO05D000165 9.0e-06 53.9 108 33.3
PSO144G0153 Papaver somniferum HOM05D000254 ORTHO05D000165 9.0e-06 53.9 104 32.7


User provided reference genes

Program Settings