Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 4.0e-51 204.5 106 100.0
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 6.3e-41 170.6 110 81.8
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 4.3e-21 104.8 108 57.4
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 5.2e-19 97.8 108 57.4
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 8.9e-19 97.1 108 56.5
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 2.1e-15 85.9 112 48.2
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 2.7e-15 85.5 112 45.5
Migut.F01037 Erythranthe guttata HOM05D007326 ORTHO05D009048 6.0e-15 84.3 101 52.5
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 1.7e-14 82.8 96 45.8
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 8.6e-14 80.5 112 45.5
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 2.1e-12 75.9 114 43.0
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 3.6e-12 75.1 112 42.0
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 4.7e-12 74.7 112 43.8
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 6.2e-12 74.3 118 39.8
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 6.2e-12 74.3 102 45.1
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 8.1e-12 73.9 105 43.8
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.1e-11 73.6 119 42.0
SGA_v2.0_scaffold46G17378 Striga asiatica HOM05D007326 ORTHO05D009048 1.1e-11 73.6 97 49.5
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.4e-11 73.2 119 42.0
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 1.4e-11 73.2 119 42.0
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 1.8e-11 72.8 98 42.9
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 3.1e-11 72.0 88 45.5
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 4.0e-11 71.6 113 41.6
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 8.9e-11 70.5 118 42.4
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 8.9e-11 70.5 34 85.3
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 1.5e-10 69.7 121 41.3
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 2.0e-10 69.3 91 48.4
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 2.0e-10 69.3 90 47.8
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.6e-10 68.9 121 40.5
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 3.4e-10 68.6 122 45.1
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 4.4e-10 68.2 122 41.0
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 5.8e-10 67.8 36 83.3
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 5.8e-10 67.8 113 42.5
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 7.6e-10 67.4 33 87.9
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 7.6e-10 67.4 114 43.0
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 9.9e-10 67.0 31 90.3
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 9.9e-10 67.0 31 90.3
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 9.9e-10 67.0 31 90.3
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 9.9e-10 67.0 115 42.6
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 9.9e-10 67.0 31 90.3
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 9.9e-10 67.0 117 41.9
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.3e-09 66.6 71 49.3
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 1.3e-09 66.6 123 43.1
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.3e-09 66.6 105 42.9
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 1.3e-09 66.6 111 44.1
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 1.3e-09 66.6 86 44.2
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 1.7e-09 66.2 93 44.1
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 2.2e-09 65.9 124 40.3
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 2.2e-09 65.9 39 71.8
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 2.9e-09 65.5 67 49.3
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 2.9e-09 65.5 31 87.1
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 2.9e-09 65.5 31 87.1
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 2.9e-09 65.5 31 87.1
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 2.9e-09 65.5 31 83.9
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 2.9e-09 65.5 77 50.6
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 3.8e-09 65.1 119 43.7
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 3.8e-09 65.1 121 41.3
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 3.8e-09 65.1 124 42.7
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 3.8e-09 65.1 98 42.9
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 4.9e-09 64.7 50 60.0
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.9e-09 64.7 115 43.5
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 4.9e-09 64.7 72 51.4
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 6.4e-09 64.3 125 40.8
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 6.4e-09 64.3 89 41.6
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 6.4e-09 64.3 101 46.5
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 6.4e-09 64.3 123 40.7
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 8.4e-09 63.9 56 58.9
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 8.4e-09 63.9 117 41.0
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 8.4e-09 63.9 112 41.1
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 8.4e-09 63.9 113 42.5
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 8.4e-09 63.9 33 84.8
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 1.1e-08 63.5 83 53.0
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.1e-08 63.5 100 44.0
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 1.1e-08 63.5 30 86.7
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 1.4e-08 63.2 123 37.4
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 1.9e-08 62.8 75 49.3
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 1.9e-08 62.8 113 38.1
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 4.1e-08 61.6 53 56.6
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 4.1e-08 61.6 72 48.6
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 5.4e-08 61.2 60 58.3
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 5.4e-08 61.2 114 39.5
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 5.4e-08 61.2 57 52.6
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 5.4e-08 61.2 59 57.6
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 5.4e-08 61.2 42 69.0
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 5.4e-08 61.2 59 54.2
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 7.1e-08 60.8 106 40.6
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 9.2e-08 60.5 74 45.9
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 1.2e-07 60.1 55 54.5
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 1.6e-07 59.7 116 39.7
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 2.1e-07 59.3 66 51.5
FvH4_7g31800 Fragaria vesca HOM05D000354 ORTHO05D000717 2.1e-07 59.3 45 62.2
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 3.5e-07 58.5 110 42.7
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 3.5e-07 58.5 110 42.7
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 3.5e-07 58.5 71 52.1
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 3.5e-07 58.5 106 39.6
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 3.5e-07 58.5 115 36.5
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 1.0e-06 57.0 75 48.0
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 1.3e-06 56.6 33 72.7
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 1.7e-06 56.2 26 88.5
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 3.9e-06 55.1 30 80.0
Cre02.g073800 Chlamydomonas reinhardtii HOM05D007326 ORTHO05D009048 6.6e-06 54.3 43 60.5


User provided reference genes

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