Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 0.0e+00 1138.6 587 100.0
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 3.4e-43 180.6 123 79.7
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 4.6e-24 117.1 268 34.7
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 8.1e-21 106.3 253 34.0
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 9.0e-20 102.8 93 61.3
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 9.0e-20 102.8 270 32.6
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.2e-19 102.4 272 31.2
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 1.2e-19 102.4 251 32.7
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 1.5e-19 102.1 269 31.2
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 4.5e-19 100.5 111 53.2
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 5.8e-19 100.1 268 31.7
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 3.8e-18 97.4 305 30.5
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 4.9e-18 97.1 152 46.1
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 6.4e-18 96.7 258 33.3
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 8.4e-18 96.3 254 31.5
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.4e-17 95.5 262 30.5
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 1.9e-17 95.1 263 30.0
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 3.2e-17 94.4 262 30.9
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 4.2e-17 94.0 107 56.1
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 5.5e-17 93.6 127 52.0
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 5.5e-17 93.6 116 53.4
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.2e-16 92.4 248 31.5
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.2e-16 92.4 248 31.5
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.2e-16 92.4 110 58.2
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 1.2e-16 92.4 129 45.7
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.6e-16 92.0 103 53.4
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 2.1e-16 91.7 249 31.7
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 2.1e-16 91.7 115 53.0
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.0e-15 89.4 248 30.6
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 3.0e-15 87.8 248 30.6
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 6.7e-15 86.7 98 50.0
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 1.5e-14 85.5 124 49.2
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 1.9e-14 85.1 268 29.5
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 4.3e-14 84.0 253 30.4
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 5.6e-14 83.6 119 45.4
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 7.4e-14 83.2 91 53.8
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 1.3e-13 82.4 260 29.2
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 1.6e-13 82.0 256 27.7
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 2.1e-13 81.6 103 45.6
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 2.1e-13 81.6 103 46.6
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 3.7e-13 80.9 247 29.1
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 3.7e-13 80.9 273 29.3
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 3.7e-13 80.9 97 47.4
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 8.2e-13 79.7 91 51.6
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.4e-12 79.0 260 26.5
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 1.8e-12 78.6 273 28.6
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 3.1e-12 77.8 248 29.0
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 3.1e-12 77.8 115 44.3
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 3.1e-12 77.8 96 47.9
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 6.9e-12 76.6 120 43.3
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 9.0e-12 76.3 91 50.5
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 1.5e-11 75.5 92 50.0
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 1.5e-11 75.5 264 28.0
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 2.0e-11 75.1 91 48.4
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 2.0e-11 75.1 268 29.1
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 4.5e-11 73.9 260 27.7
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 5.8e-11 73.6 102 43.1
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 5.8e-11 73.6 109 44.0
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 7.6e-11 73.2 97 45.4
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 7.6e-11 73.2 95 44.2
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 7.6e-11 73.2 111 44.1
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 1.3e-10 72.4 115 42.6
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 2.2e-10 71.6 95 45.3
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 2.2e-10 71.6 91 48.4
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 3.8e-10 70.9 110 41.8
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 6.5e-10 70.1 97 44.3
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 8.4e-10 69.7 116 40.5
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 8.4e-10 69.7 92 45.7
MSTRG.26214 Avicennia marina HOM05D002128 ORTHO05D002497 1.4e-09 68.9 72 51.4
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 1.4e-09 68.9 95 43.2
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 1.4e-09 68.9 103 40.8
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 1.9e-09 68.6 95 43.2
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 1.9e-09 68.6 95 43.2
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 1.9e-09 68.6 95 43.2
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 2.5e-09 68.2 95 43.2
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 2.5e-09 68.2 132 36.4
SalBow1G6554 Salvia bowleyana HOM05D002128 ORTHO05D002497 2.5e-09 68.2 72 54.2
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 3.2e-09 67.8 91 47.3
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 3.2e-09 67.8 91 47.3
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 3.2e-09 67.8 122 36.9
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 4.2e-09 67.4 91 46.2
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 4.2e-09 67.4 91 46.2
Oeu004281.1 Olea europaea HOM05D005171 ORTHO05D006343 5.5e-09 67.0 42 78.6
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 7.1e-09 66.6 121 38.8
Gohir.A11G147450 Gossypium hirsutum HOM05D005171 ORTHO05D006343 7.1e-09 66.6 117 47.0
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 9.3e-09 66.2 126 38.9
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 9.3e-09 66.2 95 42.1
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 1.6e-08 65.5 94 42.6
Cpa.g.sc136.58 Carica papaya HOM05D005171 ORTHO05D006343 1.6e-08 65.5 115 41.7
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 1.6e-08 65.5 147 40.1
Oeu009075.1 Olea europaea HOM05D002128 ORTHO05D002497 2.1e-08 65.1 71 53.5
SGA_v2.0_scaffold12G06077 Striga asiatica HOM05D002128 ORTHO05D002497 2.1e-08 65.1 70 54.3
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 3.5e-08 64.3 116 39.7
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 3.5e-08 64.3 124 37.9
Gohir.D11G154350 Gossypium hirsutum HOM05D005171 ORTHO05D006343 3.5e-08 64.3 121 45.5
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 3.5e-08 64.3 117 40.2
Cpa.g.c43179 Carica papaya HOM05D005171 ORTHO05D006343 4.6e-08 63.9 105 41.9
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 4.6e-08 63.9 115 37.4
SGA_v2.0_scaffold17G07942 Striga asiatica HOM05D002128 ORTHO05D002497 6.0e-08 63.5 70 52.9
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 1.3e-07 62.4 213 26.8
CDE02G4591 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 2.3e-07 61.6 128 39.1
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 2.3e-07 61.6 110 44.5
Migut.K00230 Erythranthe guttata HOM05D002128 ORTHO05D002497 3.0e-07 61.2 52 57.7
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.9e-07 60.8 82 45.1
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 3.9e-07 60.8 118 37.3
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 3.9e-07 60.8 91 44.0
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 5.1e-07 60.5 115 36.5
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 6.7e-07 60.1 113 38.1
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 8.7e-07 59.7 115 36.5
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 8.7e-07 59.7 115 36.5
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 8.7e-07 59.7 92 40.2
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 1.1e-06 59.3 93 41.9
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 1.1e-06 59.3 121 47.1
Migut.J01502 Erythranthe guttata HOM05D002128 ORTHO05D002497 1.5e-06 58.9 52 63.5
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.5e-06 58.9 115 35.7
Oeu002549.2 Olea europaea HOM05D002128 ORTHO05D002497 1.9e-06 58.5 67 47.8
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 2.5e-06 58.2 92 38.0
Actinidia12354 Actinidia chinensis HOM05D005171 ORTHO05D006343 3.3e-06 57.8 81 46.9
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 4.3e-06 57.4 105 38.1
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 9.7e-06 56.2 264 28.4


User provided reference genes

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