Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 7.9e-55 216.9 109 100.0
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 4.7e-31 137.9 107 67.3
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 6.1e-31 137.5 103 70.9
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 6.1e-31 137.5 105 68.6
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 1.4e-30 136.3 104 72.1
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 6.8e-30 134.0 105 67.6
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 1.2e-29 133.3 105 68.6
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 1.8e-27 125.9 104 66.3
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 2.4e-27 125.6 105 64.8
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 7.0e-27 124.0 107 65.4
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 2.0e-26 122.5 102 66.7
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 3.5e-26 121.7 104 65.4
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 4.5e-26 121.3 103 65.0
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.0e-25 120.2 104 64.4
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.3e-25 119.8 106 64.2
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.3e-25 119.8 107 65.4
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 1.3e-25 119.8 107 65.4
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 1.7e-25 119.4 104 65.4
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 2.9e-25 118.6 104 65.4
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 2.9e-25 118.6 107 63.6
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 2.9e-25 118.6 104 64.4
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 3.8e-25 118.2 106 64.2
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 5.0e-25 117.9 105 62.9
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.1e-24 116.7 102 62.7
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.1e-24 116.7 102 62.7
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 1.5e-24 116.3 107 61.7
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 1.5e-24 116.3 109 59.6
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 1.9e-24 115.9 104 65.4
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 3.3e-24 115.2 103 64.1
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.3e-24 115.2 109 58.7
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 3.3e-24 115.2 102 61.8
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 4.2e-24 114.8 102 61.8
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 5.5e-24 114.4 102 60.8
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 9.5e-24 113.6 105 60.0
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 1.2e-23 113.2 102 60.8
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 1.6e-23 112.8 110 62.7
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 1.6e-23 112.8 104 61.5
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 1.6e-23 112.8 105 65.7
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 2.1e-23 112.5 111 57.7
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 2.8e-23 112.1 116 56.0
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 2.8e-23 112.1 104 62.5
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 3.6e-23 111.7 119 59.7
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 3.6e-23 111.7 102 58.8
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 4.7e-23 111.3 109 57.8
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 4.7e-23 111.3 104 63.5
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 4.7e-23 111.3 102 59.8
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 4.7e-23 111.3 102 59.8
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 6.1e-23 110.9 106 58.5
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 6.1e-23 110.9 105 61.0
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 6.1e-23 110.9 107 58.9
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 6.1e-23 110.9 119 58.8
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 6.1e-23 110.9 119 58.8
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 8.0e-23 110.5 102 59.8
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.4e-22 109.8 102 57.8
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 1.4e-22 109.8 108 57.4
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 1.8e-22 109.4 111 59.5
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 1.8e-22 109.4 102 59.8
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 2.3e-22 109.0 106 57.5
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 2.3e-22 109.0 104 57.7
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 2.3e-22 109.0 103 61.2
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 3.0e-22 108.6 102 60.8
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 3.0e-22 108.6 102 60.8
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 3.0e-22 108.6 102 60.8
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 3.0e-22 108.6 107 58.9
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 3.0e-22 108.6 102 59.8
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 3.0e-22 108.6 104 61.5
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 4.0e-22 108.2 102 56.9
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 4.0e-22 108.2 103 59.2
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 4.0e-22 108.2 104 57.7
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 6.8e-22 107.5 120 55.0
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 6.8e-22 107.5 109 56.9
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 6.8e-22 107.5 104 60.6
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 1.2e-21 106.7 119 57.1
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 2.0e-21 105.9 104 56.7
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 2.6e-21 105.5 104 56.7
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 2.6e-21 105.5 107 55.1
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 3.4e-21 105.1 102 54.9
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 3.4e-21 105.1 103 56.3
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 3.4e-21 105.1 106 58.5
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 3.4e-21 105.1 111 58.6
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.4e-21 104.8 125 53.6
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 7.5e-21 104.0 101 59.4
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.5e-21 104.0 120 53.3
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 7.5e-21 104.0 104 56.7
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.7e-20 102.8 101 56.4
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 2.2e-20 102.4 102 56.9
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 2.2e-20 102.4 104 57.7
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.8e-20 102.1 112 53.6
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.8e-20 102.1 112 53.6
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 2.8e-20 102.1 110 56.4
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 2.8e-20 102.1 105 57.1
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 3.7e-20 101.7 106 56.6
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 4.9e-20 101.3 104 56.7
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 4.9e-20 101.3 114 54.4
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.9e-20 101.3 117 53.0
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 6.3e-20 100.9 117 52.1
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.3e-20 100.9 119 51.3
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 6.3e-20 100.9 103 56.3
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 8.3e-20 100.5 102 57.8
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 1.1e-19 100.1 110 55.5
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.1e-19 100.1 102 54.9
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.1e-19 100.1 102 54.9
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 1.1e-19 100.1 102 59.8
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 1.4e-19 99.8 103 56.3
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 2.4e-19 99.0 102 57.8
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 2.4e-19 99.0 105 55.2
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 3.1e-19 98.6 102 54.9
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 3.1e-19 98.6 102 54.9
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 3.1e-19 98.6 102 54.9
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 3.1e-19 98.6 101 58.4
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 4.1e-19 98.2 104 54.8
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 4.1e-19 98.2 106 56.6
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 7.0e-19 97.4 102 55.9
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 9.2e-19 97.1 106 52.8
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 1.2e-18 96.7 109 53.2
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 1.6e-18 96.3 102 55.9
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 3.5e-18 95.1 102 56.9
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 3.5e-18 95.1 107 53.3
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 4.5e-18 94.7 116 50.0
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 7.8e-18 94.0 102 54.9
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 1.9e-16 89.4 111 52.3
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 2.5e-16 89.0 100 53.0
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 4.7e-15 84.7 103 53.4
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 6.1e-15 84.3 102 52.9
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 2.0e-13 79.3 107 47.7
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.7e-12 76.3 101 45.5
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.9e-12 75.5 102 48.0
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 7.0e-11 70.9 100 43.0
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 9.2e-11 70.5 102 45.1
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 3.9e-09 65.1 100 48.0
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 4.0e-06 55.1 80 48.8
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 4.0e-06 55.1 80 48.8
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 8.9e-06 53.9 55 52.7


User provided reference genes

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