Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 3.7e-105 384.8 185 100.0
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.6e-103 379.4 182 99.5
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 4.6e-95 351.3 182 92.3
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 5.6e-85 317.8 182 81.3
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.8e-83 312.8 182 78.6
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 9.9e-82 307.0 185 77.8
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 2.2e-81 305.8 184 75.5
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 2.9e-81 305.4 183 78.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 3.8e-81 305.1 182 76.9
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 3.8e-81 305.1 183 78.1
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 2.4e-80 302.4 182 75.3
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.2e-80 302.0 182 75.3
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 3.2e-80 302.0 183 77.0
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 5.4e-80 301.2 182 76.4
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 5.4e-80 301.2 182 75.8
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 7.8e-79 297.4 184 73.9
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.0e-78 297.0 182 74.7
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 3.0e-78 295.4 182 75.3
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.0e-78 295.4 182 74.2
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 6.6e-78 294.3 182 74.7
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.5e-77 293.1 182 74.2
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 1.9e-77 292.7 183 73.8
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.9e-77 292.7 182 74.2
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 2.5e-77 292.4 182 72.0
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 5.6e-77 291.2 182 72.5
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 9.6e-77 290.4 182 70.3
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.3e-76 290.0 182 71.4
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 1.6e-76 289.7 182 74.7
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.6e-76 288.5 182 73.1
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 6.2e-76 287.7 182 72.5
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 2.4e-75 285.8 182 72.0
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.1e-75 285.4 183 72.7
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 3.1e-75 285.4 182 72.5
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 5.3e-75 284.6 182 71.4
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 2.0e-74 282.7 182 70.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 2.6e-74 282.3 182 69.8
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 4.5e-74 281.6 182 72.5
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.3e-73 280.0 182 69.2
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 2.9e-73 278.9 182 69.8
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 3.8e-73 278.5 182 69.8
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.8e-73 278.5 182 69.2
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.9e-72 276.2 182 67.6
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 2.4e-72 275.8 182 69.8
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 4.2e-72 275.0 182 67.6
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 5.4e-72 274.6 182 70.3
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 7.1e-72 274.2 182 72.0
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 2.7e-71 272.3 182 70.3
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 2.7e-71 272.3 183 69.4
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.5e-71 271.9 182 70.9
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.9e-71 270.8 182 69.8
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.3e-70 270.0 182 69.8
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.3e-70 270.0 183 68.9
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 1.8e-70 269.6 183 69.9
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.8e-70 269.6 181 70.2
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.8e-70 269.6 183 69.9
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 3.9e-70 268.5 179 70.4
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 5.1e-70 268.1 183 66.7
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 1.1e-69 266.9 183 69.4
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.1e-69 266.9 179 68.2
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 4.3e-69 265.0 183 67.2
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 5.6e-69 264.6 179 68.7
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 7.4e-69 264.2 180 66.7
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 9.6e-69 263.8 182 67.0
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 9.6e-69 263.8 182 67.0
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 1.3e-68 263.5 183 66.1
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 1.6e-68 263.1 182 67.6
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.6e-68 263.1 182 67.6
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.4e-67 259.2 181 66.3
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.1e-67 258.8 182 64.8
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 3.1e-67 258.8 182 67.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 6.9e-67 257.7 182 64.8
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 6.9e-67 257.7 180 66.7
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 9.0e-67 257.3 182 64.8
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.2e-66 256.9 181 66.3
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.2e-66 256.9 182 64.8
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 2.6e-66 255.8 180 66.1
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.4e-66 255.4 182 64.8
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 3.4e-66 255.4 184 65.2
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 4.5e-66 255.0 165 69.1
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 5.8e-66 254.6 183 68.3
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 3.8e-65 251.9 181 64.6
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.8e-65 251.9 182 63.7
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 1.1e-64 250.4 182 63.2
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 4.2e-64 248.4 182 63.2
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 5.5e-64 248.1 182 62.6
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.5e-64 248.1 180 60.0
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.0e-62 242.3 178 65.7
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.5e-61 239.2 182 59.9
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 3.1e-59 232.3 182 55.5
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 6.9e-59 231.1 182 56.6
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.2e-58 230.3 183 57.4
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 4.9e-57 224.9 182 62.6
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.8e-54 216.5 126 75.4
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 1.5e-53 213.4 147 60.5
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.5e-53 213.4 180 52.2
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.5e-53 212.6 180 52.2
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 4.8e-52 208.4 128 71.9
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.8e-51 206.5 111 80.2
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 6.5e-49 198.0 180 50.6
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.9e-48 196.4 181 47.0
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.6e-47 193.4 180 56.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 3.6e-47 192.2 180 45.6
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 2.3e-46 189.5 179 45.3
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.3e-44 183.7 182 46.7
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 2.2e-44 183.0 181 47.5
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 4.1e-43 178.7 180 44.4
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 5.3e-43 178.3 184 47.3
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.5e-40 169.5 184 46.2
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.2e-39 167.2 147 53.1
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 3.9e-30 135.6 106 65.1
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 8.0e-23 111.3 159 37.1
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.1e-19 99.0 70 71.4
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 6.8e-14 81.6 189 27.5


User provided reference genes

Program Settings