Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 3.4e-132 474.9 230 100.0
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 1.2e-92 343.6 247 71.7
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 3.8e-83 312.0 245 64.5
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 8.5e-83 310.8 245 65.3
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 8.5e-83 310.8 241 65.6
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 1.1e-82 310.5 243 65.4
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 1.5e-82 310.1 245 66.5
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.5e-82 310.1 245 64.9
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.9e-82 309.7 244 64.3
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 1.9e-82 309.7 238 67.2
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 7.2e-82 307.8 247 64.8
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 7.2e-82 307.8 240 65.4
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 1.2e-81 307.0 243 64.6
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 1.2e-81 307.0 240 65.0
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 3.6e-81 305.4 241 64.3
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 1.8e-80 303.1 239 63.6
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 2.3e-80 302.8 238 63.0
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 3.0e-80 302.4 240 64.6
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 6.7e-80 301.2 242 62.8
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 1.2e-79 300.4 240 63.8
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 1.2e-79 300.4 240 63.8
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 1.5e-79 300.1 240 64.6
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 2.0e-79 299.7 237 64.1
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 2.0e-79 299.7 241 63.5
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 2.6e-79 299.3 243 63.4
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 2.6e-79 299.3 246 62.6
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 3.3e-79 298.9 238 63.4
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 5.7e-79 298.1 250 60.4
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 7.5e-79 297.7 242 62.4
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 9.7e-79 297.4 243 61.3
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 2.2e-78 296.2 242 62.8
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 4.8e-78 295.0 237 62.9
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 4.8e-78 295.0 247 61.5
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 6.3e-78 294.7 242 62.8
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 8.2e-78 294.3 243 62.1
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 8.2e-78 294.3 238 60.5
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 1.1e-77 293.9 259 59.5
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 1.1e-77 293.9 240 61.2
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.1e-77 293.9 240 61.2
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.1e-77 293.9 240 61.2
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 1.1e-77 293.9 247 62.3
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.1e-77 293.9 243 61.3
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 1.8e-77 293.1 243 60.9
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.8e-77 293.1 239 61.1
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 2.4e-77 292.7 237 62.4
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 4.1e-77 292.0 242 62.4
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 4.1e-77 292.0 243 60.9
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 5.3e-77 291.6 247 60.7
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 5.3e-77 291.6 245 60.8
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 5.3e-77 291.6 245 60.8
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 7.0e-77 291.2 247 60.7
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 7.0e-77 291.2 242 61.6
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 7.0e-77 291.2 241 62.2
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.0e-77 291.2 240 60.4
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 9.1e-77 290.8 247 60.7
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 1.2e-76 290.4 248 60.9
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 1.2e-76 290.4 248 60.9
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 1.2e-76 290.4 240 62.5
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 1.2e-76 290.4 234 62.8
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 2.0e-76 289.7 239 61.5
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 2.0e-76 289.7 243 60.9
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 2.7e-76 289.3 242 61.6
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 2.7e-76 289.3 242 61.6
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 3.5e-76 288.9 243 61.3
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 5.9e-76 288.1 247 61.1
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 5.9e-76 288.1 247 61.1
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 5.9e-76 288.1 245 59.6
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 5.9e-76 288.1 241 59.8
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 5.9e-76 288.1 241 61.0
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 7.7e-76 287.7 241 61.8
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 7.7e-76 287.7 239 61.9
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 2.2e-75 286.2 242 61.2
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 6.5e-75 284.6 240 61.2
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 6.5e-75 284.6 244 61.5
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 8.5e-75 284.3 241 61.4
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 8.5e-75 284.3 239 61.5
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 1.1e-74 283.9 242 61.2
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 1.1e-74 283.9 243 60.5
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 1.5e-74 283.5 249 59.0
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.5e-74 283.5 243 59.3
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 1.5e-74 283.5 239 60.7
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 1.5e-74 283.5 242 60.7
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.9e-74 283.1 235 60.4
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 2.5e-74 282.7 240 59.6
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 3.2e-74 282.3 242 59.1
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 3.2e-74 282.3 242 59.9
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 1.2e-73 280.4 238 58.8
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 2.1e-73 279.6 245 58.4
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 2.1e-73 279.6 245 58.4
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 2.1e-73 279.6 245 58.4
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 4.7e-73 278.5 223 61.9
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 4.7e-73 278.5 239 60.7
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 6.1e-73 278.1 241 59.3
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 1.0e-72 277.3 238 59.7
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 1.4e-72 276.9 237 60.8
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 1.4e-72 276.9 238 60.1
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 1.8e-72 276.6 242 58.7
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 5.2e-72 275.0 240 59.6
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 2.0e-71 273.1 242 58.3
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 2.0e-71 273.1 238 58.0
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 3.4e-71 272.3 242 58.3
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 4.4e-71 271.9 226 61.5
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.3e-70 270.4 244 55.7
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.3e-70 270.4 241 58.1
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 2.2e-70 269.6 241 56.8
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 5.4e-69 265.0 247 56.3
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 1.7e-67 260.0 238 56.7
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 4.2e-66 255.4 242 55.8
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 1.0e-64 250.8 362 42.3
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 8.9e-64 247.7 223 57.4
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 2.0e-63 246.5 240 52.9
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 5.7e-63 245.0 228 57.9
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 4.1e-61 238.8 240 52.5
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.6e-60 236.9 204 59.8
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 1.0e-56 224.2 240 48.8
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 9.8e-55 217.6 245 49.4
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 3.5e-52 209.1 122 80.3
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 2.3e-51 206.5 237 48.1
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 8.6e-51 204.5 125 78.4
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 1.5e-50 203.8 189 56.1
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 2.5e-50 203.0 248 42.7
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 1.7e-46 190.3 208 51.4
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 6.4e-46 188.3 112 78.6
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 3.2e-45 186.0 249 42.2
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 4.1e-45 185.7 177 55.4
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 1.7e-43 180.3 123 68.3
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 7.3e-42 174.9 238 41.2
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 2.3e-40 169.9 252 40.9
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 3.9e-35 152.5 87 79.3
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 1.1e-34 151.0 108 69.4
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 1.6e-33 147.1 118 58.5
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 1.3e-30 137.5 103 65.0
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 3.8e-30 136.0 203 38.4
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 2.4e-29 133.3 72 81.9
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 5.6e-26 122.1 234 31.2
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 1.4e-24 117.5 210 39.0
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 4.0e-24 115.9 70 80.0
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 2.0e-23 113.6 82 68.3
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 5.8e-23 112.1 211 32.7
Nn3g18971 Nelumbo nucifera HOM05D004677 ORTHO05D005746 5.8e-23 112.1 67 76.1
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 1.9e-21 107.1 69 65.2
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.7e-19 100.5 66 72.7
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 1.5e-18 97.4 219 31.1
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 3.3e-18 96.3 70 60.0
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 6.4e-14 82.0 55 70.9
Cre06.g258600 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 1.4e-13 80.9 246 25.6
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 4.2e-13 79.3 83 50.6
FAN09G2974 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.6e-12 75.9 41 80.5
arahy.Tifrunner.gnm1.ann1.WARH89 Arachis hypogaea HOM05D004677 ORTHO05D005746 4.5e-07 59.3 28 92.9
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 5.8e-07 58.9 65 47.7
AagrBONN_evm.TU.Sc2ySwM_117.58 Anthoceros agrestis HOM05D004677 ORTHO05D074401 4.9e-06 55.8 69 42.0


User provided reference genes

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