Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 5.5e-170 600.9 307 100.0
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.9e-130 469.5 261 91.2
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 3.3e-114 415.6 250 85.6
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.8e-112 409.8 250 84.8
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 4.1e-109 398.7 262 80.5
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 4.6e-108 395.2 262 79.4
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 7.8e-108 394.4 266 78.6
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 3.9e-107 392.1 262 77.9
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 8.6e-107 391.0 266 77.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 8.6e-107 391.0 258 79.1
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.8e-105 386.0 308 70.5
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 1.1e-104 384.0 267 77.5
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 2.4e-104 382.9 266 76.7
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 2.4e-104 382.9 264 76.5
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 3.1e-104 382.5 269 76.2
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.5e-103 380.2 273 74.7
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.4e-103 379.0 266 75.9
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 3.4e-103 379.0 266 75.9
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 4.4e-103 378.6 248 78.6
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 4.4e-103 378.6 248 79.0
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 5.8e-103 378.3 264 78.4
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 5.8e-103 378.3 261 77.0
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 5.8e-103 378.3 270 75.6
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.6e-103 377.9 266 75.9
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 1.7e-102 376.7 295 70.2
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 2.9e-102 375.9 272 74.6
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 3.8e-102 375.6 278 74.1
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 4.2e-101 372.1 246 77.6
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 4.2e-101 372.1 255 74.5
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 4.2e-101 372.1 270 74.1
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 9.3e-101 370.9 272 75.0
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.6e-100 370.2 272 75.0
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.6e-100 370.2 253 77.5
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 1.6e-100 370.2 257 76.7
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 3.5e-100 369.0 264 75.8
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 3.5e-100 369.0 264 75.0
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 4.6e-100 368.6 270 73.3
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 6.0e-100 368.2 265 74.3
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.0e-100 368.2 246 76.8
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 1.0e-99 367.5 257 75.9
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 1.3e-99 367.1 254 77.2
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 1.3e-99 367.1 272 74.6
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.7e-99 366.7 270 74.8
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.3e-99 366.3 266 74.8
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 6.6e-99 364.8 268 73.5
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 6.6e-99 364.8 262 76.0
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 1.1e-98 364.0 266 72.2
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.9e-98 363.2 253 77.9
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 3.3e-98 362.5 255 75.7
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 9.6e-98 360.9 267 72.7
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.6e-97 360.1 270 70.7
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.6e-97 360.1 266 71.1
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.1e-97 359.8 267 73.0
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 2.8e-97 359.4 267 73.0
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.8e-97 359.4 267 73.0
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 4.8e-97 358.6 266 71.4
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 6.2e-97 358.2 266 70.3
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 8.1e-97 357.8 266 71.1
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.4e-96 357.1 247 76.5
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 1.4e-96 357.1 266 71.1
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.4e-96 357.1 272 72.1
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 3.1e-96 355.9 277 70.8
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 3.1e-96 355.9 264 72.7
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 3.1e-96 355.9 273 71.4
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 4.0e-96 355.5 261 74.7
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.9e-96 354.8 269 72.5
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 9.0e-96 354.4 270 71.9
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.2e-95 354.0 277 70.8
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 1.2e-95 354.0 273 70.3
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 2.0e-95 353.2 267 73.0
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.6e-95 352.8 267 71.9
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 3.4e-95 352.4 255 73.7
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 4.5e-95 352.1 266 71.1
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 5.8e-95 351.7 271 71.2
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 7.6e-95 351.3 270 70.7
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 2.2e-94 349.7 267 71.5
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 2.2e-94 349.7 259 73.0
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 2.9e-94 349.4 276 71.4
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 6.4e-94 348.2 269 70.6
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 8.4e-94 347.8 265 69.4
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 7.1e-93 344.7 270 69.6
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 9.3e-93 344.4 260 71.2
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.2e-92 344.0 260 71.2
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.6e-92 343.6 267 70.0
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 1.6e-92 343.6 267 69.3
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 2.1e-92 343.2 271 67.5
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 4.6e-92 342.0 257 70.8
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 4.6e-92 342.0 269 68.4
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 1.0e-91 340.9 271 69.4
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 1.0e-91 340.9 259 71.0
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.3e-91 340.5 268 66.8
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 2.3e-91 339.7 270 68.9
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 3.9e-91 339.0 257 70.4
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 3.3e-90 335.9 274 67.2
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 4.3e-90 335.5 269 67.7
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 5.6e-90 335.1 295 64.1
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 9.6e-90 334.3 272 68.8
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 1.3e-89 334.0 270 67.4
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.3e-89 334.0 270 67.4
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 1.3e-89 334.0 270 67.4
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 3.6e-89 332.4 231 73.2
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 1.1e-88 330.9 261 69.0
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.1e-88 330.9 272 68.8
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 2.4e-88 329.7 260 70.4
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 2.4e-88 329.7 235 71.1
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 3.1e-88 329.3 254 70.5
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 3.1e-88 329.3 271 67.2
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 6.9e-88 328.2 248 72.2
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.5e-87 327.0 231 72.3
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 2.6e-87 326.2 270 67.4
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 3.4e-87 325.9 271 64.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 5.8e-87 325.1 263 67.7
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 9.9e-87 324.3 265 66.8
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 9.9e-87 324.3 271 65.7
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.3e-86 323.9 272 66.2
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 1.1e-85 320.9 257 68.5
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 1.4e-85 320.5 232 74.1
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.2e-84 317.4 257 68.1
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 6.0e-84 315.1 260 68.5
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.8e-83 313.5 277 65.0
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 3.9e-83 312.4 251 69.3
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 6.7e-83 311.6 270 65.6
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.3e-82 308.9 231 69.3
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 2.1e-81 306.6 248 69.4
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 4.8e-81 305.4 244 68.0
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 1.1e-80 304.3 257 66.1
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 3.1e-80 302.8 292 59.6
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 9.0e-80 301.2 270 62.2
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 4.5e-79 298.9 263 61.2
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 9.3e-77 291.2 174 83.3
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.7e-76 289.7 240 65.8
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 1.3e-73 280.8 259 62.9
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 9.0e-72 274.6 257 62.3
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 1.5e-71 273.9 268 58.6
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.9e-70 269.6 226 65.0
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.1e-69 267.7 262 57.3
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.1e-67 258.8 232 62.5
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 1.5e-66 257.3 259 59.1
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.5e-66 256.5 168 75.6
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.1e-64 249.6 262 55.0
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 5.3e-64 248.8 244 59.0
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 9.1e-64 248.1 239 59.4
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 6.5e-62 241.9 251 53.0
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 4.2e-61 239.2 206 64.6
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 1.0e-59 234.6 309 47.6
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 3.1e-56 223.0 262 48.5
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 5.3e-56 222.2 240 52.1
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 3.6e-52 209.5 174 66.1
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 5.2e-51 205.7 259 48.6
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 2.2e-46 190.3 228 52.6
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 2.5e-45 186.8 269 43.1
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 4.8e-41 172.6 213 47.9
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 4.4e-34 149.4 122 67.2
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 1.7e-30 137.5 98 72.4
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.9e-29 134.0 164 52.4
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 4.4e-26 122.9 123 56.1
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.1e-24 118.2 314 31.5
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 2.9e-22 110.2 212 38.2
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 6.1e-20 102.4 61 83.6
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 1.4e-16 91.3 75 70.7
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 4.1e-16 89.7 50 78.0
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 2.7e-15 87.0 57 66.7
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 1.0e-14 85.1 88 60.2
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-12 77.4 58 69.0
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.1e-11 73.6 79 50.6
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 2.6e-10 70.5 48 68.8
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 7.5e-10 68.9 49 67.3
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 3.7e-09 66.6 50 64.0
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 1.6e-07 61.2 246 22.8


User provided reference genes

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