Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036629.1 Olea europaea HOM05D003277 ORTHO05D003275 4.5e-49 197.6 99 100.0
Migut.A00248 Erythranthe guttata HOM05D003277 ORTHO05D003275 4.4e-20 101.3 94 55.3
SGA_v2.0_scaffold27G11531 Striga asiatica HOM05D003277 ORTHO05D003275 1.9e-18 95.9 92 55.4
Gohir.A05G049100 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.0e-17 92.4 99 48.5
Gohir.D05G051000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.0e-17 92.4 99 48.5
Gorai.009G052600 Gossypium raimondii HOM05D003277 ORTHO05D003275 2.0e-17 92.4 99 48.5
COL.COLO4_18709 Corchorus olitorius HOM05D003277 ORTHO05D003275 1.3e-16 89.7 96 47.9
MBI01_g34157_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 3.0e-16 88.6 102 48.0
TAR624G0051 Trochodendron aralioides HOM05D003277 ORTHO05D003275 3.3e-15 85.1 99 48.5
Ciclev10009982m.g Citrus clementina HOM05D003277 ORTHO05D003275 4.3e-15 84.7 100 46.0
Gohir.D07G027850 Gossypium hirsutum HOM05D003277 ORTHO05D003275 7.3e-15 84.0 97 46.4
Gorai.001G029100 Gossypium raimondii HOM05D003277 ORTHO05D003275 9.5e-15 83.6 98 48.0
Duzib150G1012 Durio zibethinus HOM05D000818 ORTHO05D003275 1.6e-14 82.8 96 46.9
Gohir.A07G024250 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.1e-14 82.4 98 46.9
Thecc.09G038300 Theobroma cacao HOM05D003277 ORTHO05D003275 2.1e-14 82.4 101 43.6
Prupe.1G454200 Prunus persica HOM05D003277 ORTHO05D003275 6.2e-14 80.9 97 46.4
Glyma.14G140500 Glycine max HOM05D003277 ORTHO05D003275 8.1e-14 80.5 86 46.5
Nn2g11767 Nelumbo nucifera HOM05D003277 ORTHO05D003275 8.1e-14 80.5 104 43.3
Atru.chr7.2298 Acer truncatum HOM05D003277 ORTHO05D003275 1.1e-13 80.1 93 46.2
Nn8g39213 Nelumbo nucifera HOM05D003277 ORTHO05D003275 1.1e-13 80.1 106 45.3
Cfa013333 Carpinus fangiana HOM05D003277 ORTHO05D003275 3.1e-13 78.6 85 47.1
Manes.03G064500 Manihot esculenta HOM05D003277 ORTHO05D003275 8.9e-13 77.0 102 41.2
Manes.03G064940 Manihot esculenta HOM05D003277 ORTHO05D003275 8.9e-13 77.0 102 41.2
Haze_21824 Corylus avellana HOM05D003277 ORTHO05D003275 2.6e-12 75.5 100 44.0
Phvul.009G105000 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 3.4e-12 75.1 89 43.8
EL10Ac2g02521 Beta vulgaris HOM05D003277 ORTHO05D003275 5.8e-12 74.3 90 45.6
Aqoxy7G01700 Aquilegia oxysepala HOM05D003277 ORTHO05D003275 9.9e-12 73.6 105 41.9
Ca_15626_v3 Cicer arietinum L. HOM05D003277 ORTHO05D003275 1.7e-11 72.8 97 44.3
Glyma.04G079300 Glycine max HOM05D003277 ORTHO05D003275 1.7e-11 72.8 98 42.9
Rhsim07G0155500 Rhododendron simsii HOM05D003277 ORTHO05D003275 1.7e-11 72.8 94 47.9
Lsat_1_v5_gn_6_11260 Lactuca sativa HOM05D003277 ORTHO05D003275 2.2e-11 72.4 100 47.0
TPR.G12111 Trifolium pratense HOM05D003277 ORTHO05D003275 2.9e-11 72.0 91 41.8
Haze_25704 Corylus avellana HOM05D000750 ORTHO05D000714 4.9e-11 71.2 93 44.1
RcHm_v2.0_Chr6g0305601 Rosa chinensis HOM05D003277 ORTHO05D003275 6.4e-11 70.9 100 43.0
QL12p026142 Quercus lobata HOM05D003277 ORTHO05D003275 8.3e-11 70.5 106 39.6
Sc09g0008990 Simmondsia chinensis HOM05D003277 ORTHO05D003275 8.3e-11 70.5 92 45.7
MBI04_g08935_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 1.1e-10 70.1 96 40.6
Manes.16G066800 Manihot esculenta HOM05D003277 ORTHO05D003275 1.1e-10 70.1 108 40.7
Cfa003268 Carpinus fangiana HOM05D003277 ORTHO05D003275 1.9e-10 69.3 101 41.6
MELO3C003594.2 Cucumis melo HOM05D003277 ORTHO05D003275 5.4e-10 67.8 89 41.6
CsaV3_3G047340 Cucumis sativus L. HOM05D002580 ORTHO05D002811 5.4e-10 67.8 89 41.6
Lalb_Chr23g0269371 Lupinus albus HOM05D003277 ORTHO05D003275 9.2e-10 67.0 106 37.7
Thecc.06G088500 Theobroma cacao HOM05D003277 ORTHO05D003275 9.2e-10 67.0 106 37.7
ClCG11G013950 Citrullus lanatus HOM05D003277 ORTHO05D003275 1.2e-09 66.6 89 40.4
Duzib235G0396 Durio zibethinus HOM05D003277 ORTHO05D003275 1.2e-09 66.6 107 39.3
CiPaw.08G022600 Carya illinoinensis HOM05D003277 ORTHO05D003275 1.6e-09 66.2 106 37.7
Sabra06G0191100 Salix brachista HOM05D003277 ORTHO05D003275 1.6e-09 66.2 88 44.3
FAN15G2136 Fragaria x ananassa HOM05D003277 ORTHO05D003275 2.1e-09 65.9 100 41.0
Manes.16G117100 Manihot esculenta HOM05D003277 ORTHO05D003275 2.1e-09 65.9 103 37.9
Nitab4.5_0003537g0060 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.1e-09 65.9 105 38.1
Cpa.g.sc205.7 Carica papaya HOM05D003277 ORTHO05D003275 3.5e-09 65.1 93 43.0
COL.COLO4_34902 Corchorus olitorius HOM05D003277 ORTHO05D003275 3.5e-09 65.1 109 41.3
FAN20G0113 Fragaria x ananassa HOM05D003277 ORTHO05D003275 3.5e-09 65.1 100 41.0
Glyma.05G231600 Glycine max HOM05D003277 ORTHO05D003275 3.5e-09 65.1 99 38.4
Potri.006G244200 Populus trichocarpa HOM05D003277 ORTHO05D003275 4.6e-09 64.7 97 41.2
Potri.018G036300 Populus trichocarpa HOM05D003277 ORTHO05D003275 4.6e-09 64.7 100 39.0
FvH4_2g36280 Fragaria vesca HOM05D003277 ORTHO05D003275 6.0e-09 64.3 100 40.0
FAN27G2228 Fragaria x ananassa HOM05D003277 ORTHO05D003275 6.0e-09 64.3 100 40.0
Glyma.06G080800 Glycine max HOM05D003277 ORTHO05D003275 6.0e-09 64.3 99 40.4
Glyma.07G087300 Glycine max HOM05D003277 ORTHO05D003275 6.0e-09 64.3 64 48.4
Hma1.2p1_0018F.1_g013430 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 7.8e-09 63.9 101 42.6
Psat6g033640 Pisum sativum HOM05D003277 ORTHO05D003275 7.8e-09 63.9 77 40.3
Eucgr.C02884 Eucalyptus grandis HOM05D003277 ORTHO05D003275 1.0e-08 63.5 99 39.4
QL02p085574 Quercus lobata HOM05D003277 ORTHO05D003275 1.3e-08 63.2 91 40.7
QL05p023505 Quercus lobata HOM05D003277 ORTHO05D003275 1.3e-08 63.2 106 37.7
Thecc.09G112200 Theobroma cacao HOM05D003277 ORTHO05D003275 1.3e-08 63.2 63 47.6
Lj1g0024029 Lotus japonicus HOM05D003277 ORTHO05D003275 2.3e-08 62.4 93 35.5
TPR.G27852 Trifolium pratense HOM05D003277 ORTHO05D003275 2.3e-08 62.4 108 38.9
ATR1120G187 Amborella trichopoda HOM05D003277 ORTHO05D003275 3.0e-08 62.0 67 49.3
arahy.Tifrunner.gnm1.ann1.R7R2S9 Arachis hypogaea HOM05D003277 ORTHO05D003275 3.0e-08 62.0 105 37.1
Atru.chr1.3275 Acer truncatum HOM05D003277 ORTHO05D003275 3.9e-08 61.6 109 37.6
Duzib150G0682 Durio zibethinus HOM05D003277 ORTHO05D003275 3.9e-08 61.6 102 42.2
Medtr3g109430 Medicago truncatula HOM05D003277 ORTHO05D003275 3.9e-08 61.6 94 37.2
COL.COLO4_30383 Corchorus olitorius HOM05D003277 ORTHO05D003275 5.1e-08 61.2 90 37.8
Hma1.2p1_0092F.1_g046645 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 5.1e-08 61.2 101 38.6
Phvul.002G313800 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 5.1e-08 61.2 90 40.0
THA.LOC104803771 Tarenaya hassleriana HOM05D012534 ORTHO05D003275 5.1e-08 61.2 101 39.6
ATR1120G160 Amborella trichopoda HOM05D003277 ORTHO05D003275 6.6e-08 60.8 67 43.3
Dinv36618 Davidia involucrata HOM05D003277 ORTHO05D003275 6.6e-08 60.8 102 38.2
CSS0031837 Camellia sinensis var. sinensis HOM05D003277 ORTHO05D003275 8.6e-08 60.5 62 50.0
Sed0006476 Sechium edule HOM05D003277 ORTHO05D003275 8.6e-08 60.5 88 42.0
ATR1120G144 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.1e-07 60.1 67 43.3
Cc04_g03410 Coffea canephora HOM05D003277 ORTHO05D003275 1.1e-07 60.1 61 49.2
HPP92_002801 Vanilla planifolia HOM05D003277 ORTHO05D003275 1.1e-07 60.1 65 46.2
ATR1120G137 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.5e-07 59.7 66 43.9
Glyma.13G359300 Glycine max HOM05D003277 ORTHO05D003275 1.5e-07 59.7 62 46.8
Sopen12g003040 Solanum pennellii HOM05D003277 ORTHO05D003275 1.5e-07 59.7 111 36.0
VMungo0251G2336 Vigna mungo HOM05D003277 ORTHO05D003275 1.5e-07 59.7 97 37.1
PGSC0003DMG400000320 Solanum tuberosum HOM05D003277 ORTHO05D003275 1.9e-07 59.3 103 37.9
ATR1120G013 Amborella trichopoda HOM05D003277 ORTHO05D003275 2.5e-07 58.9 65 43.1
Ciclev10026796m.g Citrus clementina HOM05D003277 ORTHO05D003275 2.5e-07 58.9 107 35.5
Manes.04G123700 Manihot esculenta HOM05D003277 ORTHO05D003275 2.5e-07 58.9 101 36.6
Sopen06g025000 Solanum pennellii HOM05D003277 ORTHO05D003275 2.5e-07 58.9 85 42.4
VMungo1080G1196 Vigna mungo HOM05D003111 ORTHO05D003502 2.5e-07 58.9 61 47.5
PGSC0003DMG400016508 Solanum tuberosum HOM05D003277 ORTHO05D003275 3.3e-07 58.5 61 49.2
Cc02_g27850 Coffea canephora HOM05D003277 ORTHO05D003275 4.3e-07 58.2 61 47.5
Manes.11G047000 Manihot esculenta HOM05D003277 ORTHO05D003275 4.3e-07 58.2 67 46.3
Psat0s1478g0280 Pisum sativum HOM05D003277 ORTHO05D003275 4.3e-07 58.2 90 35.6
Prupe.3G070700 Prunus persica HOM05D003277 ORTHO05D003275 5.6e-07 57.8 74 40.5
PGSC0003DMG400000318 Solanum tuberosum HOM05D003277 ORTHO05D003275 5.6e-07 57.8 111 34.2
Glyma.15G014600 Glycine max HOM05D003277 ORTHO05D003275 7.3e-07 57.4 61 47.5
Prupe.7G229300 Prunus persica HOM05D003277 ORTHO05D003275 7.3e-07 57.4 113 36.3
PGSC0003DMG400000319 Solanum tuberosum HOM05D003277 ORTHO05D003275 7.3e-07 57.4 105 37.1
TPR.G24192 Trifolium pratense HOM05D003277 ORTHO05D003275 7.3e-07 57.4 56 50.0
Medtr4g012490 Medicago truncatula HOM05D003277 ORTHO05D003275 9.5e-07 57.0 62 46.8
Phvul.005G171100 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 9.5e-07 57.0 62 46.8
Psat7g252200 Pisum sativum HOM05D003277 ORTHO05D003275 9.5e-07 57.0 63 46.0
MELO3C029688.2 Cucumis melo HOM05D003277 ORTHO05D003275 1.2e-06 56.6 81 37.0
Migut.D01029 Erythranthe guttata HOM05D003277 ORTHO05D003275 1.2e-06 56.6 65 49.2
Oeu033486.1 Olea europaea HOM05D003277 ORTHO05D003275 1.2e-06 56.6 102 38.2
Peaxi162Scf00560g00019 Petunia axillaris HOM05D003277 ORTHO05D003275 1.2e-06 56.6 133 30.8
Potri.001G180500 Populus trichocarpa HOM05D003277 ORTHO05D003275 1.2e-06 56.6 89 37.1
Gohir.D05G129700 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.6e-06 56.2 67 40.3
Gorai.009G133500 Gossypium raimondii HOM05D003277 ORTHO05D003275 1.6e-06 56.2 67 40.3
Psat7g252160 Pisum sativum HOM05D003277 ORTHO05D003275 1.6e-06 56.2 57 49.1
Sabra01G0146300 Salix brachista HOM05D003277 ORTHO05D003275 1.6e-06 56.2 64 45.3
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.6e-06 56.2 84 36.9
Phvul.004G162400 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 2.1e-06 55.8 63 44.4
Sopen12g003020 Solanum pennellii HOM05D003277 ORTHO05D003275 2.1e-06 55.8 101 35.6
TAR636G2419 Trochodendron aralioides HOM05D000750 ORTHO05D000714 2.1e-06 55.8 43 62.8
CsaV3_1G030570 Cucumis sativus L. HOM05D003277 ORTHO05D003275 2.8e-06 55.5 82 36.6
Migut.I00868 Erythranthe guttata HOM05D003277 ORTHO05D003275 2.8e-06 55.5 117 35.0
Gohir.A05G130300 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.8e-06 55.5 67 40.3
Solyc12g007040.3 Solanum lycopersicum HOM05D003277 ORTHO05D003275 2.8e-06 55.5 101 35.6
Oeu063975.1 Olea europaea HOM05D003277 ORTHO05D003275 3.6e-06 55.1 61 49.2
Oeu063976.1 Olea europaea HOM05D003277 ORTHO05D003275 3.6e-06 55.1 61 49.2
ATR1120G074 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.7e-06 54.7 68 42.6
Nitab4.5_0002859g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 4.7e-06 54.7 72 41.7
Glyma.09G189600 Glycine max HOM05D003277 ORTHO05D003275 6.2e-06 54.3 61 41.0
Lalb_Chr25g0279671 Lupinus albus HOM05D003277 ORTHO05D003275 6.2e-06 54.3 59 45.8
Actinidia32754 Actinidia chinensis HOM05D003277 ORTHO05D003275 8.1e-06 53.9 106 34.0
Potri.003G055100 Populus trichocarpa HOM05D003277 ORTHO05D003275 8.1e-06 53.9 88 37.5


User provided reference genes

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