Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036625.1 Olea europaea HOM05D004248 ORTHO05D004978 3.4e-297 1024.2 521 100.0
Oeu052620.1 Olea europaea HOM05D004248 ORTHO05D004978 1.8e-242 842.4 601 75.0
MSTRG.5896 Avicennia marina HOM05D004248 ORTHO05D004978 2.2e-139 500.0 603 49.1
GSVIVG01033953001 Vitis vinifera HOM05D004248 ORTHO05D004978 7.0e-125 451.8 598 43.5
Dinv05301 Davidia involucrata HOM05D004248 ORTHO05D004978 1.2e-124 451.1 465 51.2
CAN.G574.19 Capsicum annuum HOM05D004248 ORTHO05D004978 1.1e-122 444.5 601 44.3
Solyc01g007140.3 Solanum lycopersicum HOM05D004248 ORTHO05D004978 1.6e-121 440.7 597 43.7
SGA_v2.0_scaffold13G06632 Striga asiatica HOM05D004248 ORTHO05D004978 2.1e-121 440.3 633 42.8
Dinv31757 Davidia involucrata HOM05D004248 ORTHO05D004978 1.8e-120 437.2 593 42.8
Sopen01g003120 Solanum pennellii HOM05D004248 ORTHO05D004978 5.2e-120 435.6 597 43.4
CSS0019025 Camellia sinensis var. sinensis HOM05D004248 ORTHO05D004978 4.4e-119 432.6 580 43.4
Cc06_g06530 Coffea canephora HOM05D004248 ORTHO05D004978 3.5e-116 422.9 591 41.8
CiPaw.10G017100 Carya illinoinensis HOM05D004248 ORTHO05D004978 4.5e-116 422.5 594 41.8
Actinidia06045 Actinidia chinensis HOM05D004248 ORTHO05D004978 1.0e-115 421.4 593 42.3
Actinidia37744 Actinidia chinensis HOM05D004248 ORTHO05D004978 1.1e-114 417.9 590 42.0
Cfa020026 Carpinus fangiana HOM05D004248 ORTHO05D004978 1.0e-112 411.4 593 41.7
DCAR_020706 Daucus carota HOM05D004248 ORTHO05D004978 4.0e-112 409.5 580 41.7
QL07p036804 Quercus lobata HOM05D004248 ORTHO05D004978 4.0e-112 409.5 563 41.6
Rhsim03G0064800 Rhododendron simsii HOM05D004248 ORTHO05D004978 4.0e-112 409.5 594 41.8
vmacro07476 Vaccinium macrocarpon HOM05D004248 ORTHO05D004978 5.2e-112 409.1 596 40.8
Haze_20188 Corylus avellana HOM05D004248 ORTHO05D004978 3.4e-111 406.4 564 42.7
Atru.chr9.697 Acer truncatum HOM05D004248 ORTHO05D004978 5.4e-109 399.1 587 41.2
Migut.J00705 Erythranthe guttata HOM05D004248 ORTHO05D004978 7.0e-109 398.7 591 41.3
Atru.chr8.1370 Acer truncatum HOM05D004248 ORTHO05D004978 6.6e-107 392.1 598 40.8
Nn4g22932 Nelumbo nucifera HOM05D004248 ORTHO05D004978 8.0e-105 385.2 599 39.4
Ciclev10011038m.g Citrus clementina HOM05D004248 ORTHO05D004978 1.4e-104 384.4 597 40.2
RcHm_v2.0_Chr3g0475871 Rosa chinensis HOM05D004248 ORTHO05D004978 4.0e-104 382.9 607 38.1
Gohir.A09G134400 Gossypium hirsutum HOM05D004248 ORTHO05D004978 5.2e-104 382.5 591 40.3
TWI74G1036 Tripterygium wilfordii HOM05D004248 ORTHO05D004978 5.8e-103 379.0 589 38.7
ECA247G2914 Erigeron canadensis HOM05D004248 ORTHO05D004978 7.5e-103 378.6 601 38.9
Thecc.05G104000 Theobroma cacao HOM05D004248 ORTHO05D004978 1.7e-102 377.5 598 39.6
Gorai.006G149600 Gossypium raimondii HOM05D004248 ORTHO05D004978 3.7e-102 376.3 591 39.1
Gohir.D09G130900 Gossypium hirsutum HOM05D004248 ORTHO05D004978 1.9e-101 374.0 591 38.7
FAN14G1070 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.6e-100 370.9 601 37.6
FvH4_6g20280 Fragaria vesca HOM05D004248 ORTHO05D004978 3.5e-100 369.8 601 37.9
FAN09G3200 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.3e-99 367.9 601 37.8
Manes.09G044700 Manihot esculenta HOM05D004248 ORTHO05D004978 1.7e-99 367.5 596 38.9
RcHm_v2.0_Chr1g0331061 Rosa chinensis HOM05D004248 ORTHO05D004978 1.7e-99 367.5 607 36.7
Manes.09G045100 Manihot esculenta HOM05D004248 ORTHO05D004978 3.9e-99 366.3 596 38.3
Potri.001G208900 Populus trichocarpa HOM05D004248 ORTHO05D004978 1.9e-98 364.0 603 38.1
Potri.011G095700 Populus trichocarpa HOM05D004248 ORTHO05D004978 5.6e-98 362.5 603 37.6
MD10G1053900 Malus domestica HOM05D004248 ORTHO05D004978 1.8e-96 357.5 609 37.3
HanXRQChr17g0549301 Helianthus annuus HOM05D004248 ORTHO05D004978 2.6e-95 353.6 593 37.6
RcHm_v2.0_Chr1g0331071 Rosa chinensis HOM05D004248 ORTHO05D004978 3.4e-95 353.2 570 37.5
Duzib093G0037 Durio zibethinus HOM05D004248 ORTHO05D004978 9.9e-95 351.7 492 41.3
Cpa.g.sc104.35 Carica papaya HOM05D004248 ORTHO05D004978 8.3e-94 348.6 476 42.6
Eucgr.E01507 Eucalyptus grandis HOM05D004248 ORTHO05D004978 9.2e-93 345.1 597 36.3
Sabra06G0156800 Salix brachista HOM05D004248 ORTHO05D004978 1.6e-92 344.4 575 38.3
FAN05G4951 Fragaria x ananassa HOM05D004248 ORTHO05D004978 2.7e-92 343.6 581 37.5
Lj1g0019866 Lotus japonicus HOM05D004248 ORTHO05D004978 1.0e-91 341.7 596 38.4
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 1.7e-91 340.9 595 37.5
FAN05G1094 Fragaria x ananassa HOM05D004248 ORTHO05D004978 3.9e-91 339.7 585 37.3
Peaxi162Scf00586g00027 Petunia axillaris HOM05D004248 ORTHO05D004978 5.1e-91 339.3 552 39.9
Lalb_Chr20g0111391 Lupinus albus HOM05D004248 ORTHO05D004978 1.5e-90 337.8 599 36.1
MBI13_g30330_MAGBIO Magnolia biondii HOM05D004248 ORTHO05D003073 8.9e-88 328.6 611 35.2
Glyma.07G150100 Glycine max HOM05D004248 ORTHO05D004978 2.2e-86 323.9 600 36.8
MD12G1040000 Malus domestica HOM05D004248 ORTHO05D004978 3.8e-86 323.2 571 36.8
THA.LOC104809952 Tarenaya hassleriana HOM05D004248 ORTHO05D004978 1.1e-85 321.6 595 35.0
Glyma.16G099100 Glycine max HOM05D004248 ORTHO05D004978 4.2e-85 319.7 600 36.7
Lsat_1_v5_gn_3_1160 Lactuca sativa HOM05D004248 ORTHO05D004978 4.2e-85 319.7 542 38.6
FAN02G0498 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.6e-84 317.8 567 37.4
Hma1.2p1_0079F.1_g041850 Hydrangea macrophylla HOM05D004248 ORTHO05D004978 2.7e-84 317.0 334 52.1
Prupe.7G095000 Prunus persica HOM05D004248 ORTHO05D004978 7.8e-84 315.5 635 34.0
Medtr7g106190 Medicago truncatula HOM05D004248 ORTHO05D004978 1.0e-83 315.1 590 36.8
Psat3g029120 Pisum sativum HOM05D004248 ORTHO05D004978 2.3e-83 313.9 590 36.8
Sabra01G0161200 Salix brachista HOM05D004248 ORTHO05D004978 3.9e-83 313.2 556 36.9
Sc22g0002860 Simmondsia chinensis HOM05D004248 ORTHO05D004978 1.9e-82 310.8 586 34.8
PSO017G5751 Papaver somniferum HOM05D004248 ORTHO05D004978 1.3e-81 308.1 595 33.1
Ca_09055_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 2.4e-80 303.9 486 38.9
TPR.G35565 Trifolium pratense HOM05D004248 ORTHO05D004978 4.0e-80 303.1 590 36.1
Phvul.008G104000 Phaseolus vulgaris HOM05D004248 ORTHO05D004978 5.3e-80 302.8 600 35.3
PSO478G2311 Papaver somniferum HOM05D004248 ORTHO05D004978 7.6e-79 298.9 603 32.5
Ca_26380_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 1.2e-76 291.6 530 36.4
Nitab4.5_0002858g0080 Nicotiana tabacum HOM05D004248 ORTHO05D004978 3.5e-76 290.0 342 47.4
Aqoxy3G00875 Aquilegia oxysepala HOM05D004248 ORTHO05D004978 2.5e-74 283.9 602 32.6
HanXRQChr06g0164371 Helianthus annuus HOM05D004248 ORTHO05D004978 9.6e-74 282.0 598 32.8
AUR62036385 Chenopodium quinoa HOM05D004248 ORTHO05D004978 1.4e-72 278.1 599 31.6
arahy.Tifrunner.gnm1.ann1.ZDQ0NF Arachis hypogaea HOM05D004248 ORTHO05D004978 2.4e-72 277.3 573 33.0
Cfa016679 Carpinus fangiana HOM05D004248 ORTHO05D004978 2.0e-71 274.2 559 34.3
Aa31sc52G180 Aethionema arabicum HOM05D004248 ORTHO05D004978 5.8e-71 272.7 596 33.4
CsaV3_3G040150 Cucumis sativus L. HOM05D004248 ORTHO05D004978 5.8e-71 272.7 327 43.1
Sed0013531 Sechium edule HOM05D004248 ORTHO05D004978 7.6e-71 272.3 333 43.5
arahy.Tifrunner.gnm1.ann1.2W33L2 Arachis hypogaea HOM05D004248 ORTHO05D004978 2.9e-70 270.4 590 32.0
Haze_19699 Corylus avellana HOM05D004248 ORTHO05D004978 1.9e-69 267.7 650 31.8
EL10Ac5g12964 Beta vulgaris HOM05D004248 ORTHO05D004978 5.4e-69 266.2 598 31.1
AT5G06350 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 9.3e-69 265.4 600 31.0
PGR004G2794 Punica granatum HOM05D004248 ORTHO05D004978 4.6e-68 263.1 579 32.1
VMungo0647G1936 Vigna mungo HOM05D004248 ORTHO05D004978 1.5e-66 258.1 604 32.0
Sp6g36500 Schrenkiella parvula HOM05D004248 ORTHO05D004978 1.6e-65 254.6 600 32.0
AL6G16430 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 6.2e-65 252.7 548 31.6
PGR004G1886 Punica granatum HOM05D004248 ORTHO05D004978 1.4e-64 251.5 585 30.8
Lj1A1051T47 Lonicera japonica HOM05D004248 ORTHO05D004978 1.8e-64 251.1 188 63.8
Thhalv10012647m.g Eutrema salsugineum HOM05D004248 ORTHO05D004978 2.4e-64 250.8 598 31.4
Carub.0006s0524 Capsella rubella HOM05D004248 ORTHO05D004978 9.0e-64 248.8 599 30.1
CANSAT01G1742 Cannabis sativa HOM05D004248 ORTHO05D004978 1.5e-63 248.1 601 31.8
CDE05G1117 Ceratophyllum demersum HOM05D004248 ORTHO05D004978 1.5e-63 248.1 465 33.3
BolC9t59789H Brassica oleracea HOM05D004248 ORTHO05D004978 2.0e-63 247.7 608 31.4
C09p70430 Brassica napus HOM05D004248 ORTHO05D004978 5.8e-63 246.1 608 31.4
BcaNung06319 Brassica carinata HOM05D004248 ORTHO05D004978 7.6e-63 245.7 604 31.8
A10p30020 Brassica napus HOM05D004248 ORTHO05D004978 7.6e-63 245.7 600 31.5
AUR62030747 Chenopodium quinoa HOM05D004248 ORTHO05D004978 1.0e-62 245.4 619 29.4
AL6G38940 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 2.9e-62 243.8 594 31.3
AT5G27010 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 4.9e-62 243.0 595 31.1
BraA10t45042Z Brassica rapa HOM05D004248 ORTHO05D004978 1.9e-61 241.1 600 30.7
CARHR207090 Cardamine hirsuta HOM05D004248 ORTHO05D004978 2.1e-60 237.7 598 29.6
BcaC06g32369 Brassica carinata HOM05D004248 ORTHO05D004978 7.9e-60 235.7 609 30.4
Nitab4.5_0000020g0030 Nicotiana tabacum HOM05D004248 ORTHO05D004978 1.0e-59 235.3 196 58.7
PGR044G2629 Punica granatum HOM05D004248 ORTHO05D004978 2.3e-59 234.2 580 30.3
AL4G19610 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 8.7e-59 232.3 577 30.3
Ah.01g014630 Amaranthus hybridus HOM05D004248 ORTHO05D004978 3.7e-57 226.9 586 30.0
ClCG10G016230 Citrullus lanatus HOM05D004248 ORTHO05D004978 5.0e-54 216.5 379 36.9
unitig_8.g3983 Utricularia gibba HOM05D004248 ORTHO05D004978 1.3e-49 201.8 455 35.6
HPP92_005875 Vanilla planifolia HOM05D004248 ORTHO05D004978 4.8e-49 199.9 322 35.7
PSO478G2592 Papaver somniferum HOM05D004248 ORTHO05D004978 1.8e-48 198.0 475 30.1
MELO3C009754.2 Cucumis melo HOM05D004248 ORTHO05D004978 1.3e-46 191.8 286 38.8
HanXRQChr06g0164401 Helianthus annuus HOM05D004248 ORTHO05D004978 6.5e-46 189.5 190 50.5
Hund14947 Selenicereus undatus HOM05D004248 ORTHO05D004978 1.2e-44 185.3 552 28.3
THA.LOC104824536 Tarenaya hassleriana HOM05D004248 ORTHO05D004978 5.1e-43 179.9 215 44.2
ATR0684G087 Amborella trichopoda HOM05D004248 ORTHO05D004978 4.3e-42 176.8 350 33.1
Ca_30860_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 7.2e-37 159.5 285 36.8
Os04g0466700 Oryza sativa ssp. japonica HOM05D004248 ORTHO05D004978 1.2e-36 158.7 591 25.7
Zm00001eb080310 Zea mays HOM05D004248 ORTHO05D004978 7.9e-36 156.0 584 26.2
Medtr5g027350 Medicago truncatula HOM05D004248 ORTHO05D004978 3.7e-33 147.1 609 27.3
Mapoly0023s0084 Marchantia polymorpha HOM05D004248 ORTHO05D004978 2.6e-31 141.0 350 27.7
Nitab4.5_0002858g0090 Nicotiana tabacum HOM05D004248 ORTHO05D004978 3.2e-29 134.0 218 39.4
Nitab4.5_0000020g0040 Nicotiana tabacum HOM05D004248 ORTHO05D004978 6.3e-25 119.8 227 37.0
Lj1A1051T46 Lonicera japonica HOM05D004248 ORTHO05D004978 7.7e-23 112.8 214 36.9
SEGI_14989 Sequoiadendron giganteum HOM05D004248 ORTHO05D004978 9.4e-21 105.9 238 31.1
BcaB02g11156 Brassica carinata HOM05D004248 ORTHO05D004978 6.8e-19 99.8 616 24.2
Pp3c26_11250 Physcomitrium patens HOM05D004248 ORTHO05D004978 1.2e-18 99.0 292 26.0
Pp3c26_11260 Physcomitrium patens HOM05D004248 ORTHO05D004978 1.2e-18 99.0 292 26.0
SMO114G0040 Selaginella moellendorffii HOM05D004248 ORTHO05D004978 4.4e-18 97.1 344 27.3
HanXRQChr06g0164411 Helianthus annuus HOM05D004248 ORTHO05D004978 8.5e-14 82.8 239 28.0
Potri.011G096201 Populus trichocarpa HOM05D004248 ORTHO05D004978 8.0e-12 76.3 112 43.8
BraA05t20915Z Brassica rapa HOM05D000848 ORTHO05D000007 1.0e-11 75.9 133 33.8
Phvul.004G028700 Phaseolus vulgaris HOM05D004248 ORTHO05D004978 1.0e-06 59.3 114 38.6


User provided reference genes

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