Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 1.6e-46 189.1 96 100.0
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 4.4e-25 117.9 87 69.0
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 7.5e-25 117.1 88 69.3
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 7.1e-23 110.5 85 67.1
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 7.1e-23 110.5 80 71.2
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 9.2e-23 110.2 88 67.0
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 9.2e-23 110.2 80 68.8
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.6e-22 109.4 78 67.9
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 4.6e-22 107.8 85 61.2
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 7.8e-22 107.1 81 65.4
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 7.8e-22 107.1 90 62.2
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.0e-21 106.7 78 69.2
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 5.1e-21 104.4 84 59.5
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.1e-20 103.2 85 63.5
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.1e-20 103.2 83 65.1
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 1.5e-20 102.8 78 66.7
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.5e-20 102.8 78 66.7
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 1.5e-20 102.8 85 63.5
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 3.3e-20 101.7 80 65.0
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 4.3e-20 101.3 90 60.0
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 4.3e-20 101.3 80 57.5
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 4.3e-20 101.3 72 66.7
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 4.3e-20 101.3 87 60.9
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 7.3e-20 100.5 79 60.8
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 1.2e-19 99.8 78 66.7
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 1.2e-19 99.8 78 65.4
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.2e-19 99.8 81 64.2
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 1.6e-19 99.4 72 61.1
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 2.1e-19 99.0 78 61.5
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 2.8e-19 98.6 85 52.9
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 3.6e-19 98.2 78 60.3
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 3.6e-19 98.2 90 57.8
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 3.6e-19 98.2 90 57.8
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 6.2e-19 97.4 77 61.0
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 6.2e-19 97.4 80 62.5
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 1.4e-18 96.3 88 61.4
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.8e-18 95.9 100 54.0
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 1.8e-18 95.9 85 51.8
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 3.1e-18 95.1 69 60.9
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 3.1e-18 95.1 69 60.9
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 3.1e-18 95.1 91 58.2
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 3.1e-18 95.1 84 58.3
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 6.8e-18 94.0 71 67.6
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 8.9e-18 93.6 65 63.1
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 1.2e-17 93.2 73 58.9
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 1.2e-17 93.2 78 61.5
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 1.2e-17 93.2 79 62.0
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 1.5e-17 92.8 79 53.2
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 2.0e-17 92.4 77 61.0
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 2.6e-17 92.0 80 61.2
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 2.6e-17 92.0 91 49.5
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 2.6e-17 92.0 71 66.2
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 4.4e-17 91.3 79 60.8
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.4e-17 91.3 79 60.8
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.4e-17 91.3 79 60.8
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.4e-17 91.3 79 60.8
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.4e-17 91.3 79 60.8
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 5.8e-17 90.9 84 58.3
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 5.8e-17 90.9 66 65.2
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 5.8e-17 90.9 66 65.2
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 7.6e-17 90.5 66 60.6
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 7.6e-17 90.5 69 56.5
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 9.9e-17 90.1 79 60.8
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 1.3e-16 89.7 91 57.1
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 1.3e-16 89.7 69 55.1
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.7e-16 89.4 66 63.6
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 2.9e-16 88.6 84 54.8
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 2.9e-16 88.6 87 52.9
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 2.9e-16 88.6 72 58.3
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 6.4e-16 87.4 89 53.9
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 6.4e-16 87.4 80 61.2
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 6.4e-16 87.4 71 59.2
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 8.3e-16 87.0 76 57.9
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 1.4e-15 86.3 79 51.9
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 1.9e-15 85.9 78 52.6
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 1.9e-15 85.9 78 52.6
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 1.9e-15 85.9 78 52.6
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 1.9e-15 85.9 78 52.6
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 1.9e-15 85.9 80 60.0
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 2.4e-15 85.5 95 51.6
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 3.2e-15 85.1 78 52.6
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 3.2e-15 85.1 79 51.9
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 4.1e-15 84.7 69 58.0
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 4.1e-15 84.7 78 48.7
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 5.4e-15 84.3 78 53.8
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 5.4e-15 84.3 82 51.2
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 5.4e-15 84.3 69 58.0
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 7.1e-15 84.0 78 52.6
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 7.1e-15 84.0 66 57.6
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 9.2e-15 83.6 79 50.6
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 9.2e-15 83.6 105 48.6
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 9.2e-15 83.6 68 58.8
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 2.1e-14 82.4 69 58.0
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 3.5e-14 81.6 78 56.4
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 6.0e-14 80.9 70 57.1
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 7.8e-14 80.5 79 46.8
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.7e-13 79.3 88 47.7
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.7e-13 79.3 88 47.7
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 2.3e-13 79.0 80 50.0
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 1.1e-12 76.6 78 53.8
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 3.3e-12 75.1 80 52.5
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 5.6e-12 74.3 79 49.4
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 5.6e-12 74.3 79 49.4
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 1.6e-11 72.8 66 53.0
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 1.6e-11 72.8 75 50.7
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 2.8e-11 72.0 75 48.0
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 4.7e-11 71.2 80 52.5
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 6.2e-11 70.9 62 48.4
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 8.1e-11 70.5 74 47.3
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 8.9e-10 67.0 92 45.7


User provided reference genes

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