Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036569.1 Olea europaea HOM05D000971 ORTHO05D000901 3.0e-145 518.5 258 100.0
Oeu014560.1 Olea europaea HOM05D000971 ORTHO05D000901 2.7e-122 442.2 258 86.4
PGSC0003DMG400003580 Solanum tuberosum HOM05D000971 ORTHO05D000901 5.8e-80 301.6 270 61.9
Nitab4.5_0001892g0040 Nicotiana tabacum HOM05D000971 ORTHO05D000901 9.9e-80 300.8 271 63.1
Sopen02g028420 Solanum pennellii HOM05D000096 ORTHO05D000901 2.2e-79 299.7 270 61.5
Peaxi162Scf00328g00620 Petunia axillaris HOM05D000971 ORTHO05D000901 8.4e-79 297.7 301 58.8
Solyc02g083640.4 Solanum lycopersicum HOM05D000971 ORTHO05D000901 1.9e-78 296.6 270 61.1
Nitab4.5_0003187g0080 Nicotiana tabacum HOM05D000971 ORTHO05D000901 5.4e-78 295.0 271 62.0
Cc07_g11010 Coffea canephora HOM05D000971 ORTHO05D000901 3.5e-77 292.4 246 65.0
Dinv40112 Davidia involucrata HOM05D000971 ORTHO05D000901 2.3e-76 289.7 273 62.6
CAN.G1274.25 Capsicum annuum HOM05D000971 ORTHO05D000901 6.6e-76 288.1 270 59.6
ClCG01G020430 Citrullus lanatus HOM05D000971 ORTHO05D000901 5.6e-75 285.0 284 56.7
Duzib264G0774 Durio zibethinus HOM05D000971 ORTHO05D000901 5.6e-75 285.0 276 60.1
TAR628G1426 Trochodendron aralioides HOM05D000971 ORTHO05D000901 1.6e-74 283.5 267 59.6
Rhsim10G0209500 Rhododendron simsii HOM05D000971 ORTHO05D000901 4.8e-74 282.0 275 61.1
Gohir.A11G173700 Gossypium hirsutum HOM05D000971 ORTHO05D000901 8.1e-74 281.2 278 61.9
MELO3C007922.2 Cucumis melo HOM05D000971 ORTHO05D000901 5.3e-73 278.5 295 54.9
Lj2A480T47 Lonicera japonica HOM05D000971 ORTHO05D000901 3.4e-72 275.8 273 60.4
vmacro22148 Vaccinium macrocarpon HOM05D000971 ORTHO05D000901 3.4e-72 275.8 276 60.5
Eucgr.J02462 Eucalyptus grandis HOM05D000971 ORTHO05D000901 9.9e-72 274.2 276 58.3
Nn5g30761 Nelumbo nucifera HOM05D000971 ORTHO05D000901 2.2e-71 273.1 284 56.7
Sabra05G0091900 Salix brachista HOM05D000971 ORTHO05D000901 8.4e-71 271.2 273 56.4
Sed0013645 Sechium edule HOM05D000971 ORTHO05D000901 9.3e-70 267.7 285 55.4
CsaV3_6G047310 Cucumis sativus L. HOM05D000971 ORTHO05D000901 2.7e-69 266.2 291 54.3
Thecc.01G015200 Theobroma cacao HOM05D000971 ORTHO05D000901 3.5e-69 265.8 273 57.1
Manes.01G147400 Manihot esculenta HOM05D000971 ORTHO05D000901 1.3e-68 263.8 298 52.7
Sed0015718 Sechium edule HOM05D000971 ORTHO05D000901 2.3e-68 263.1 291 54.3
QL06p051036 Quercus lobata HOM05D000971 ORTHO05D000901 5.1e-68 261.9 270 55.2
Duzib147G0877 Durio zibethinus HOM05D000971 ORTHO05D000901 2.5e-67 259.6 307 53.1
VMungo0251G1809 Vigna mungo HOM05D000971 ORTHO05D000901 4.3e-67 258.8 289 53.3
Haze_03736 Corylus avellana HOM05D000971 ORTHO05D000901 1.6e-66 256.9 277 57.4
Cfa006996 Carpinus fangiana HOM05D000971 ORTHO05D000901 2.8e-66 256.1 277 56.7
Hma1.2p1_0869F.1_g230730 Hydrangea macrophylla HOM05D000971 ORTHO05D000901 2.8e-66 256.1 275 56.4
TAR376G0024 Trochodendron aralioides HOM05D000971 ORTHO05D000901 3.6e-66 255.8 245 58.8
FAN26G3068 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.8e-66 255.4 277 54.9
Manes.02G105900 Manihot esculenta HOM05D000971 ORTHO05D000901 4.8e-66 255.4 275 56.0
MSTRG.2725 Avicennia marina HOM05D000971 ORTHO05D000901 8.1e-66 254.6 301 54.5
Phvul.003G264900 Phaseolus vulgaris HOM05D000971 ORTHO05D000901 3.1e-65 252.7 284 52.1
Nitab4.5_0004340g0010 Nicotiana tabacum HOM05D000971 ORTHO05D000901 4.0e-65 252.3 265 56.2
ECA246G4778 Erigeron canadensis HOM05D000971 ORTHO05D000901 5.3e-65 251.9 271 55.4
PSO541G4624 Papaver somniferum HOM05D000971 ORTHO05D000901 1.5e-64 250.4 273 53.5
PSO675G6524 Papaver somniferum HOM05D000971 ORTHO05D000901 2.6e-64 249.6 273 52.7
COL.COLO4_22456 Corchorus olitorius HOM05D000971 ORTHO05D000901 3.4e-64 249.2 284 56.0
Ciclev10025357m.g Citrus clementina HOM05D000971 ORTHO05D000901 4.5e-64 248.8 315 48.6
CiPaw.07G060700 Carya illinoinensis HOM05D000971 ORTHO05D000901 1.1e-62 244.2 278 55.0
CiPaw.08G130100 Carya illinoinensis HOM05D000971 ORTHO05D000901 4.2e-62 242.3 277 52.3
Potri.007G056500 Populus trichocarpa HOM05D000971 ORTHO05D000901 5.5e-62 241.9 310 49.0
MBI09_g35942_MAGBIO Magnolia biondii HOM05D000971 ORTHO05D000901 1.2e-61 240.7 275 53.8
Glyma.02G046200 Glycine max HOM05D000971 ORTHO05D000901 4.6e-61 238.8 293 50.5
Gorai.007G192700 Gossypium raimondii HOM05D000971 ORTHO05D000901 6.0e-61 238.4 309 51.5
Nitab4.5_0000438g0190 Nicotiana tabacum HOM05D000971 ORTHO05D000901 6.0e-61 238.4 241 57.7
Glyma.16G124700 Glycine max HOM05D000971 ORTHO05D000901 7.9e-61 238.0 294 50.7
Gohir.D11G180800 Gossypium hirsutum HOM05D000971 ORTHO05D000901 7.9e-61 238.0 309 50.8
Prupe.7G171000 Prunus persica HOM05D000971 ORTHO05D000901 7.9e-61 238.0 280 51.1
Dinv33651 Davidia involucrata HOM05D000971 ORTHO05D000901 1.0e-60 237.7 280 56.1
Lsat_1_v5_gn_3_72560 Lactuca sativa HOM05D000971 ORTHO05D000901 1.0e-60 237.7 272 54.0
MD15G1243100 Malus domestica HOM05D000971 ORTHO05D000901 1.0e-60 237.7 273 51.6
Gorai.007G192600 Gossypium raimondii HOM05D000971 ORTHO05D000901 2.3e-60 236.5 309 50.5
Potri.005G112100 Populus trichocarpa HOM05D000971 ORTHO05D000901 3.9e-60 235.7 250 53.2
Gohir.D11G180900 Gossypium hirsutum HOM05D000971 ORTHO05D000901 6.7e-60 235.0 309 51.1
Gohir.A11G173800 Gossypium hirsutum HOM05D000971 ORTHO05D000901 1.1e-59 234.2 309 50.8
Cpa.g.sc6.281 Carica papaya HOM05D000971 ORTHO05D000901 5.6e-59 231.9 282 50.0
Lalb_Chr16g0391371 Lupinus albus HOM05D000971 ORTHO05D000901 1.6e-58 230.3 289 49.8
MD02G1127900 Malus domestica HOM05D000971 ORTHO05D000901 6.2e-58 228.4 276 51.4
TWI73G1250 Tripterygium wilfordii HOM05D000971 ORTHO05D000901 1.8e-57 226.9 274 50.4
HanXRQChr16g0531531 Helianthus annuus HOM05D000971 ORTHO05D000901 2.4e-57 226.5 269 55.0
PGR102G0073 Punica granatum HOM05D000971 ORTHO05D000901 2.4e-57 226.5 309 46.9
Sabra07G0048300 Salix brachista HOM05D000971 ORTHO05D000901 2.4e-57 226.5 311 48.6
arahy.Tifrunner.gnm1.ann1.LNY1ZH Arachis hypogaea HOM05D000971 ORTHO05D000901 3.1e-57 226.1 270 51.9
Lj4g0022115 Lotus japonicus HOM05D000971 ORTHO05D000901 2.0e-56 223.4 272 50.7
arahy.Tifrunner.gnm1.ann1.LB653W Arachis hypogaea HOM05D000971 ORTHO05D000901 1.0e-55 221.1 325 45.5
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.7e-55 220.3 279 49.8
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.8e-55 219.2 280 50.0
Atru.chr3.849 Acer truncatum HOM05D000971 ORTHO05D000901 4.9e-55 218.8 379 42.7
RcHm_v2.0_Chr2g0099121 Rosa chinensis HOM05D000971 ORTHO05D000901 6.5e-55 218.4 276 48.6
CANSAT25G3482 Cannabis sativa HOM05D000971 ORTHO05D000901 3.2e-54 216.1 291 47.1
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 7.1e-54 214.9 281 49.8
Sc16g0002010 Simmondsia chinensis HOM05D000971 ORTHO05D000901 1.6e-53 213.8 314 46.2
THA.LOC104821336 Tarenaya hassleriana HOM05D000971 ORTHO05D000901 2.1e-53 213.4 363 42.4
SGA_v2.0_scaffold5G02795 Striga asiatica HOM05D000971 ORTHO05D000901 1.3e-52 210.7 254 54.3
TPR.G19496 Trifolium pratense HOM05D000971 ORTHO05D000901 1.8e-52 210.3 282 46.5
Ca_03625_v3 Cicer arietinum L. HOM05D000971 ORTHO05D000901 2.3e-52 209.9 275 46.2
AT3G51280 Arabidopsis thaliana HOM05D000971 ORTHO05D000901 3.9e-52 209.1 261 51.0
Sp5g10940 Schrenkiella parvula HOM05D000971 ORTHO05D000901 5.1e-52 208.8 266 53.4
BcaB01g00535 Brassica carinata HOM05D000971 ORTHO05D000901 6.7e-52 208.4 266 53.4
DCAR_011602 Daucus carota HOM05D000971 ORTHO05D000901 6.7e-52 208.4 321 45.2
AUR62003347 Chenopodium quinoa HOM05D000971 ORTHO05D000901 8.7e-52 208.0 306 46.7
Thhalv10010403m.g Eutrema salsugineum HOM05D000971 ORTHO05D000901 8.7e-52 208.0 264 52.7
AL5G31700 Arabidopsis lyrata HOM05D000971 ORTHO05D000901 1.1e-51 207.6 263 51.0
CARHR160860 Cardamine hirsuta HOM05D000971 ORTHO05D000901 1.1e-51 207.6 262 50.0
Medtr8g075260 Medicago truncatula HOM05D000971 ORTHO05D000901 1.1e-51 207.6 277 47.7
C07p46270 Brassica napus HOM05D000971 ORTHO05D000901 3.3e-51 206.1 266 51.9
Hund14059 Selenicereus undatus HOM05D000971 ORTHO05D000901 3.3e-51 206.1 309 44.3
GSVIVG01018744001 Vitis vinifera HOM05D000971 ORTHO05D000901 1.3e-50 204.1 270 48.9
TWI53G0653 Tripterygium wilfordii HOM05D000971 ORTHO05D000901 1.6e-50 203.8 257 50.2
SHI08531 Sapria himalayana HOM05D000971 ORTHO05D000901 3.7e-50 202.6 268 46.6
Psat4g101920 Pisum sativum HOM05D000971 ORTHO05D000901 5.3e-49 198.7 278 45.3
Ah.03g149060 Amaranthus hybridus HOM05D000971 ORTHO05D000901 9.0e-49 198.0 308 45.1
EL10Ac6g15496 Beta vulgaris HOM05D000971 ORTHO05D000901 2.6e-48 196.4 306 44.1
BcaNung00391 Brassica carinata HOM05D000971 ORTHO05D000901 4.5e-48 195.7 303 44.6
unitig_899.g14719 Utricularia gibba HOM05D000971 ORTHO05D000901 7.6e-48 194.9 241 51.9
Aqoxy6G02194 Aquilegia oxysepala HOM05D000971 ORTHO05D000901 1.0e-47 194.5 240 50.4
Actinidia36754 Actinidia chinensis HOM05D000971 ORTHO05D000901 3.8e-47 192.6 260 48.8
A03p48240 Brassica napus HOM05D000971 ORTHO05D000901 2.5e-46 189.9 263 50.6
FvH4_1g11500 Fragaria vesca HOM05D000971 ORTHO05D000901 3.2e-46 189.5 268 47.4
Migut.H02176 Erythranthe guttata HOM05D000971 ORTHO05D000901 6.1e-45 185.3 282 46.8
PSO700G0286 Papaver somniferum HOM05D000971 ORTHO05D000901 2.5e-43 179.9 326 40.5
PSO170G5248 Papaver somniferum HOM05D000971 ORTHO05D000901 9.7e-43 177.9 326 40.2
Carub.0005s1765 Capsella rubella HOM05D000971 ORTHO05D000901 3.7e-42 176.0 260 46.9
BolC8t50269H Brassica oleracea HOM05D000971 ORTHO05D000901 1.1e-41 174.5 231 50.6
BcaC06g33041 Brassica carinata HOM05D000971 ORTHO05D000901 3.4e-40 169.5 265 46.8
CARHR281610 Cardamine hirsuta HOM05D000971 ORTHO05D000901 2.9e-39 166.4 280 40.4
BcaC02g11459 Brassica carinata HOM05D000971 ORTHO05D000901 7.2e-38 161.8 269 45.4
Aa31LG1G14630 Aethionema arabicum HOM05D000971 ORTHO05D000901 1.6e-37 160.6 243 45.7
AUR62029489 Chenopodium quinoa HOM05D000971 ORTHO05D000901 1.6e-37 160.6 198 49.5
BolC1t02849H Brassica oleracea HOM05D000971 ORTHO05D000901 2.0e-35 153.7 285 41.4
C08p26560 Brassica napus HOM05D000971 ORTHO05D000901 1.3e-34 151.0 160 53.8
Zm00001eb332020 Zea mays HOM05D000971 ORTHO05D000901 1.7e-34 150.6 294 37.4
C01p29200 Brassica napus HOM05D000971 ORTHO05D000901 1.8e-33 147.1 285 40.4
GSVIVG01018742001 Vitis vinifera HOM05D000971 ORTHO05D000901 1.8e-33 147.1 151 56.3
Os09g0538500 Oryza sativa ssp. japonica HOM05D000971 ORTHO05D000901 6.9e-33 145.2 295 36.6
SalBow3G4207 Salvia bowleyana HOM05D000971 ORTHO05D000901 6.9e-33 145.2 260 42.3
Zm00001eb103750 Zea mays HOM05D000971 ORTHO05D000901 2.6e-32 143.3 309 35.0
A01p23540 Brassica napus HOM05D000971 ORTHO05D000901 3.4e-32 142.9 88 76.1
BraA01t02260Z Brassica rapa HOM05D000971 ORTHO05D000901 3.4e-32 142.9 88 76.1
DCAR_010142 Daucus carota HOM05D000971 ORTHO05D000901 7.7e-32 141.7 263 41.1
ATR0712G141 Amborella trichopoda HOM05D000971 ORTHO05D000901 1.0e-31 141.4 228 42.1
C04p15260 Brassica napus HOM05D000971 ORTHO05D015474 1.3e-31 141.0 267 41.9
BolC4t23097H Brassica oleracea HOM05D000971 ORTHO05D000901 1.3e-31 141.0 267 41.9
CDE04G2566 Ceratophyllum demersum HOM05D000971 ORTHO05D000901 1.3e-31 141.0 272 37.9
BolC3t18979H Brassica oleracea HOM05D000971 ORTHO05D015474 1.7e-31 140.6 263 42.6
C09p36240 Brassica napus HOM05D000971 ORTHO05D000901 7.2e-30 135.2 266 42.5
C03p67050 Brassica napus HOM05D000971 ORTHO05D015474 1.6e-29 134.0 263 41.8
HPP92_025916 Vanilla planifolia HOM05D000971 ORTHO05D000901 2.7e-29 133.3 259 38.6
BcaC09g50091 Brassica carinata HOM05D000971 ORTHO05D000901 6.1e-29 132.1 244 39.3
CSS0036080 Camellia sinensis var. sinensis HOM05D000971 ORTHO05D000901 1.4e-28 131.0 84 77.4
HanXRQChr15g0483911 Helianthus annuus HOM05D000971 ORTHO05D000901 1.8e-28 130.6 86 73.3
BcaNung06396 Brassica carinata HOM05D000441 ORTHO05D000901 3.0e-28 129.8 244 38.5
HPP92_025911 Vanilla planifolia HOM05D000971 ORTHO05D000901 3.9e-28 129.4 259 39.0
BolC9t56461H Brassica oleracea HOM05D000971 ORTHO05D000901 3.7e-26 122.9 262 41.2
CDE02G2381 Ceratophyllum demersum HOM05D000971 ORTHO05D000901 1.3e-23 114.4 224 37.1
SEGI_01466 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 1.3e-18 97.8 119 47.9
BcaB05g25186 Brassica carinata HOM05D000971 ORTHO05D000901 2.4e-17 93.6 49 89.8
SEGI_13552 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 2.4e-17 93.6 102 52.0
Nn8g40878 Nelumbo nucifera HOM05D000971 ORTHO05D000901 1.6e-16 90.9 127 48.8
BcaC01g02283 Brassica carinata HOM05D000971 ORTHO05D000901 3.5e-16 89.7 49 87.8
BcaC04g21048 Brassica carinata HOM05D000971 ORTHO05D000901 5.0e-15 85.9 49 83.7
GSVIVG01017969001 Vitis vinifera HOM05D000971 ORTHO05D000762 6.5e-15 85.5 128 47.7
BolC8t48353H Brassica oleracea HOM05D000971 ORTHO05D000901 1.5e-14 84.3 49 83.7
BcaC04g21049 Brassica carinata HOM05D000971 ORTHO05D015474 5.5e-14 82.4 192 41.7
BcaC01g02284 Brassica carinata HOM05D000971 ORTHO05D015474 9.4e-14 81.6 189 40.7
Mapoly0039s0109 Marchantia polymorpha HOM05D000971 ORTHO05D000901 1.6e-13 80.9 83 51.8
SEGI_16395 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 1.0e-12 78.2 57 63.2
Pp3c8_9550 Physcomitrium patens HOM05D000971 ORTHO05D000901 1.8e-12 77.4 92 50.0
Pp3c24_4880 Physcomitrium patens HOM05D000971 ORTHO05D000901 3.0e-12 76.6 109 45.0
SMO118G0355 Selaginella moellendorffii HOM05D000971 ORTHO05D000901 4.0e-12 76.3 53 66.0
Pp3c8_7770 Physcomitrium patens HOM05D000971 ORTHO05D000901 1.2e-11 74.7 135 40.0
unitig_736.g22722 Utricularia gibba HOM05D000441 ORTHO05D000340 3.4e-11 73.2 66 60.6
Pp3c8_9790 Physcomitrium patens HOM05D000971 ORTHO05D026043 5.7e-11 72.4 93 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2425 Anthoceros agrestis HOM05D000971 ORTHO05D000901 1.7e-10 70.9 53 62.3
BcaB05g23629 Brassica carinata HOM05D000971 ORTHO05D000901 2.2e-10 70.5 40 80.0
Lsat_1_v5_gn_8_108641 Lactuca sativa HOM05D000971 ORTHO05D000901 2.8e-10 70.1 42 78.6
CBR_g46247 Chara braunii HOM05D000971 ORTHO05D000901 3.7e-10 69.7 53 66.0
GSVIVG01023024001 Vitis vinifera HOM05D000898 ORTHO05D000762 3.7e-10 69.7 75 54.7
AUR62043832 Chenopodium quinoa HOM05D000971 ORTHO05D000901 8.3e-10 68.6 92 44.6
MBI02_g25364_MAGBIO Magnolia biondii HOM05D000971 ORTHO05D000901 1.6e-08 64.3 76 43.4
Pp3c5_20800 Physcomitrium patens HOM05D028141 ORTHO05D026043 1.6e-08 64.3 111 36.9
Pp3c14_16730 Physcomitrium patens HOM05D028141 ORTHO05D026043 2.7e-08 63.5 111 36.9
ATR1098G039 Amborella trichopoda HOM05D000971 ORTHO05D000901 3.5e-08 63.2 82 45.1
Pp3c24_5520 Physcomitrium patens HOM05D028141 ORTHO05D026043 3.5e-08 63.2 111 36.9
Pp3c24_5430 Physcomitrium patens HOM05D028141 ORTHO05D026043 4.5e-08 62.8 111 36.9
PSO675G0231 Papaver somniferum HOM05D000971 ORTHO05D016834 9.4e-06 55.1 52 51.9
Potri.001G465401 Populus trichocarpa HOM05D000971 ORTHO05D000901 9.4e-06 55.1 65 47.7


User provided reference genes

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