Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036562.1 Olea europaea HOM05D006429 ORTHO05D008173 6.7e-53 210.3 98 100.0
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 1.3e-32 142.9 102 65.7
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 1.3e-32 142.9 102 62.7
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 1.7e-32 142.5 102 66.7
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 2.9e-32 141.7 102 65.7
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 5.0e-32 141.0 102 61.8
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 3.2e-31 138.3 102 59.8
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 3.2e-31 138.3 102 59.8
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 7.2e-31 137.1 102 62.7
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 7.2e-31 137.1 102 64.7
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 1.2e-30 136.3 102 61.8
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 1.2e-30 136.3 102 61.8
CSS0016076 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 2.1e-30 135.6 102 61.8
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 7.9e-30 133.7 102 61.8
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 1.4e-29 132.9 102 59.8
DCAR_001526 Daucus carota HOM05D006429 ORTHO05D008173 3.9e-29 131.3 102 60.8
Sc23g0006860 Simmondsia chinensis HOM05D006429 ORTHO05D008173 3.9e-29 131.3 102 56.9
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 5.1e-29 131.0 102 59.8
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 6.7e-29 130.6 102 61.8
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 8.8e-29 130.2 102 55.9
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 8.8e-29 130.2 102 59.8
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 8.8e-29 130.2 124 54.0
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 1.1e-28 129.8 106 56.6
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 1.1e-28 129.8 102 59.8
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 1.1e-28 129.8 102 59.8
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 1.5e-28 129.4 102 57.8
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 1.5e-28 129.4 102 59.8
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 1.5e-28 129.4 102 59.8
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 2.0e-28 129.0 102 61.8
Migut.E01793 Erythranthe guttata HOM05D006429 ORTHO05D008173 2.6e-28 128.6 102 59.8
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 3.3e-28 128.3 102 54.9
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 3.3e-28 128.3 102 58.8
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 3.3e-28 128.3 102 60.8
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 5.7e-28 127.5 102 58.8
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 7.4e-28 127.1 102 58.8
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 9.7e-28 126.7 102 58.8
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 9.7e-28 126.7 102 56.9
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 1.3e-27 126.3 102 56.9
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 1.3e-27 126.3 102 58.8
Ciclev10008199m.g Citrus clementina HOM05D006429 ORTHO05D008173 1.3e-27 126.3 102 58.8
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 1.3e-27 126.3 102 56.9
Ah.12g064110 Amaranthus hybridus HOM05D006429 ORTHO05D008173 2.2e-27 125.6 102 57.8
Lj7A720G77 Lonicera japonica HOM05D006429 ORTHO05D008173 2.2e-27 125.6 102 59.8
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 2.8e-27 125.2 102 58.8
Thhalv10000103m.g Eutrema salsugineum HOM05D006429 ORTHO05D008173 3.7e-27 124.8 102 55.9
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 3.7e-27 124.8 102 56.9
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 6.3e-27 124.0 102 55.9
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 8.2e-27 123.6 104 57.7
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 1.4e-26 122.9 102 56.9
ClCG05G017010 Citrullus lanatus HOM05D006429 ORTHO05D008173 1.8e-26 122.5 102 56.9
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 2.4e-26 122.1 104 56.7
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 2.4e-26 122.1 120 49.2
Sp4g04810 Schrenkiella parvula HOM05D006429 ORTHO05D008173 2.4e-26 122.1 102 54.9
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 3.1e-26 121.7 102 56.9
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 4.1e-26 121.3 104 56.7
Lsat_1_v5_gn_6_22441 Lactuca sativa HOM05D006429 ORTHO05D008173 4.1e-26 121.3 102 55.9
Carub.0004s0522 Capsella rubella HOM05D006429 ORTHO05D008173 7.0e-26 120.6 102 52.9
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 9.1e-26 120.2 104 57.7
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 9.1e-26 120.2 118 52.5
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 1.2e-25 119.8 102 53.9
A09p55620 Brassica napus HOM05D006429 ORTHO05D008173 1.5e-25 119.4 102 52.9
BraA09t40964Z Brassica rapa HOM05D006429 ORTHO05D008173 1.5e-25 119.4 102 52.9
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 1.5e-25 119.4 104 57.7
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 1.5e-25 119.4 102 52.0
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 1.5e-25 119.4 102 58.8
Aa31LG4G9870 Aethionema arabicum HOM05D006429 ORTHO05D008173 2.0e-25 119.0 102 52.9
AT2G25530 Arabidopsis thaliana HOM05D006429 ORTHO05D008173 2.0e-25 119.0 102 53.9
C08p38620 Brassica napus HOM05D006429 ORTHO05D008173 2.0e-25 119.0 102 53.9
BolC8t51433H Brassica oleracea HOM05D006429 ORTHO05D008173 2.0e-25 119.0 102 53.9
CARHR115890 Cardamine hirsuta HOM05D006429 ORTHO05D008173 2.6e-25 118.6 102 54.9
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 2.6e-25 118.6 104 56.7
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 2.6e-25 118.6 103 55.3
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 3.5e-25 118.2 102 54.9
Eucgr.C02795 Eucalyptus grandis HOM05D006429 ORTHO05D008173 3.5e-25 118.2 102 53.9
BcaC07g40864 Brassica carinata HOM05D006429 ORTHO05D008173 4.5e-25 117.9 102 52.9
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 5.9e-25 117.5 102 54.9
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 7.7e-25 117.1 102 52.9
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 7.7e-25 117.1 104 55.8
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 1.3e-24 116.3 102 52.9
PGR044G2505 Punica granatum HOM05D006429 ORTHO05D008173 1.7e-24 115.9 102 52.0
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 1.7e-24 115.9 102 53.9
Hund04535 Selenicereus undatus HOM05D006429 ORTHO05D008173 1.7e-24 115.9 102 52.9
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 5.0e-24 114.4 113 50.4
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 6.5e-24 114.0 102 52.0
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 8.5e-24 113.6 102 54.9
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 1.5e-23 112.8 164 39.6
AUR62032542 Chenopodium quinoa HOM05D006429 ORTHO05D008173 2.5e-23 112.1 102 52.0
Nitab4.5_0005761g0100 Nicotiana tabacum HOM05D006429 ORTHO05D008173 4.2e-23 111.3 133 45.1
CDE02G3972 Ceratophyllum demersum HOM05D006429 ORTHO05D008173 1.2e-22 109.8 102 50.0
Os03g0851900 Oryza sativa ssp. japonica HOM05D006429 ORTHO05D008173 1.5e-20 102.8 102 46.1
HPP92_009845 Vanilla planifolia HOM05D006429 ORTHO05D008173 2.0e-20 102.4 102 47.1
Haze_21537 Corylus avellana HOM05D006429 ORTHO05D008173 3.7e-19 98.2 69 63.8
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 1.1e-18 96.7 71 62.0
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 3.1e-18 95.1 102 47.1
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 3.8e-16 88.2 105 45.7
Pp3c7_12170 Physcomitrium patens HOM05D006429 ORTHO05D008173 2.5e-15 85.5 107 41.1
SMO228G0075 Selaginella moellendorffii HOM05D006429 ORTHO05D008173 5.5e-15 84.3 103 40.8
Mapoly0085s0040 Marchantia polymorpha HOM05D006429 ORTHO05D008173 2.1e-14 82.4 108 43.5
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis HOM05D006429 ORTHO05D008173 4.7e-14 81.3 108 39.8
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 5.7e-12 74.3 102 43.1
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 5.7e-12 74.3 70 48.6
CAN.G1230.11 Capsicum annuum HOM05D006429 ORTHO05D008173 7.5e-12 73.9 63 54.0
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 7.5e-12 73.9 70 48.6
unitig_37.g12933 Utricularia gibba HOM05D006429 ORTHO05D008173 1.7e-11 72.8 63 49.2
Zm00001eb064690 Zea mays HOM05D006429 ORTHO05D008173 1.5e-07 59.7 120 30.8


User provided reference genes

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