Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 2.6e-194 681.8 320 100.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.3e-161 573.2 320 80.0
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 4.1e-160 568.2 316 81.0
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 2.0e-159 565.8 318 81.4
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.5e-157 559.7 317 79.5
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.9e-157 559.3 317 79.2
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.9e-157 559.3 319 79.3
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.6e-157 557.8 317 78.9
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.1e-156 555.8 320 79.7
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 6.2e-156 554.3 319 78.4
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 8.0e-156 553.9 319 77.7
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.8e-155 552.7 317 77.6
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 3.1e-155 552.0 319 78.1
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.1e-155 552.0 318 79.2
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.1e-155 552.0 317 78.9
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 5.2e-155 551.2 319 76.5
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 2.0e-154 549.3 319 78.1
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 3.4e-154 548.5 319 77.7
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.7e-153 545.0 317 77.3
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 8.3e-153 543.9 317 76.3
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.4e-152 543.1 319 76.8
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.4e-152 543.1 319 77.1
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.4e-152 543.1 319 76.8
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-152 542.7 310 79.0
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 2.4e-152 542.3 317 76.7
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.2e-152 542.0 318 77.4
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 4.1e-152 541.6 318 76.7
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 9.2e-152 540.4 319 76.5
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 1.2e-151 540.0 319 75.9
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.0e-151 539.3 317 76.0
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.0e-151 539.3 317 76.0
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 3.5e-151 538.5 317 75.7
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 4.6e-151 538.1 312 76.9
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 7.8e-151 537.3 319 76.5
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 7.8e-151 537.3 319 76.5
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.0e-150 537.0 318 75.5
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.0e-150 537.0 317 75.7
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.7e-150 536.2 319 75.9
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 3.0e-150 535.4 319 77.1
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 3.9e-150 535.0 318 74.5
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.9e-149 532.7 317 74.1
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 2.5e-149 532.3 319 74.6
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.7e-148 528.1 311 76.2
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.1e-147 526.9 311 76.5
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.1e-147 526.9 320 74.7
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.4e-147 526.6 318 74.8
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 1.4e-147 526.6 319 74.3
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.3e-147 525.8 319 74.6
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 4.0e-147 525.0 319 74.3
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 5.2e-147 524.6 320 73.1
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 6.8e-147 524.2 319 74.9
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.0e-146 522.7 318 73.6
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 2.6e-146 522.3 319 71.5
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.6e-146 522.3 294 79.9
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 3.4e-146 521.9 319 73.7
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.4e-146 521.5 319 74.3
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.8e-146 521.2 316 75.0
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 7.5e-146 520.8 318 73.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 7.5e-146 520.8 319 71.5
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.8e-146 520.4 317 73.5
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 9.8e-146 520.4 318 74.8
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.3e-145 520.0 319 73.4
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 2.2e-145 519.2 319 74.0
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 2.9e-145 518.8 319 73.7
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 2.9e-145 518.8 305 77.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.9e-145 518.8 319 73.7
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 3.7e-145 518.5 319 74.3
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 4.9e-145 518.1 319 74.3
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 6.4e-145 517.7 318 73.3
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 8.3e-145 517.3 320 74.7
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.1e-144 516.9 320 73.1
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.1e-144 516.9 322 72.0
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.4e-144 516.5 319 74.3
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 2.4e-144 515.8 319 74.0
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.2e-144 515.4 320 72.5
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.2e-144 515.4 307 74.3
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 5.4e-144 514.6 313 73.2
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.2e-143 513.5 320 72.8
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.2e-143 513.5 318 74.2
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.1e-143 512.7 320 72.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 2.7e-143 512.3 314 73.2
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 7.8e-143 510.8 313 72.5
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 7.8e-143 510.8 319 73.0
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.0e-142 508.8 313 71.9
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 3.0e-142 508.8 314 71.7
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 3.0e-142 508.8 306 75.2
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 3.0e-142 508.8 307 75.2
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 3.9e-142 508.4 319 73.7
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 8.6e-142 507.3 306 74.8
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.1e-141 506.9 308 76.0
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.9e-141 506.1 318 70.4
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.9e-141 506.1 318 73.6
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 5.6e-141 504.6 313 72.5
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 7.3e-141 504.2 307 72.6
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 7.3e-141 504.2 320 71.9
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 9.5e-141 503.8 319 71.8
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 3.1e-139 498.8 318 71.7
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 2.6e-138 495.7 319 69.0
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 2.6e-138 495.7 301 73.1
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.2e-137 492.7 318 68.2
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 8.4e-137 490.7 317 69.7
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.1e-136 490.3 309 70.2
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 9.2e-136 487.3 318 68.2
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.0e-135 484.6 317 68.8
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 7.8e-135 484.2 308 68.8
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 7.8e-135 484.2 308 70.1
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 2.3e-134 482.6 309 68.9
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.9e-134 481.9 288 76.0
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 6.6e-134 481.1 308 69.5
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 6.6e-134 481.1 307 69.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.9e-133 479.6 318 70.1
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.9e-133 479.6 308 68.5
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.5e-133 479.2 288 75.7
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.5e-133 479.2 318 68.6
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.3e-133 478.8 304 71.1
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 5.6e-133 478.0 315 69.8
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 7.3e-133 477.6 315 69.5
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 9.6e-133 477.2 308 68.8
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.6e-132 476.5 315 69.2
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.6e-132 476.5 315 69.2
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 6.2e-132 474.6 288 72.9
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 4.0e-131 471.9 318 68.9
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 4.9e-129 464.9 308 65.3
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 7.8e-127 457.6 293 71.0
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 1.9e-125 453.0 315 67.0
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 6.2e-124 448.0 319 65.5
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.1e-123 447.2 316 63.6
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.2e-122 443.7 322 63.4
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 5.8e-122 441.4 273 71.1
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 3.2e-120 435.6 319 63.3
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.7e-119 432.6 307 61.6
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.3e-115 418.3 306 60.5
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 9.0e-115 417.5 312 62.5
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.9e-109 399.8 302 62.6
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 3.1e-107 392.5 309 57.3
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.5e-106 390.2 317 60.6
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.5e-106 390.2 317 60.6
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.2e-103 380.6 305 57.0
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.0e-102 377.5 217 76.0
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.1e-100 369.8 224 73.2
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.2e-95 354.0 312 55.1
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 5.3e-91 338.6 309 52.1
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 5.3e-83 312.0 274 56.2
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 8.2e-76 288.1 308 49.0
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 2.1e-71 273.5 181 70.2
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 8.8e-70 268.1 263 53.2
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.2e-50 204.5 126 70.6
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 2.3e-49 200.3 134 70.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 4.4e-45 186.0 318 34.9
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.5e-45 185.3 113 75.2
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 8.9e-38 161.8 303 31.7
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 9.5e-32 141.7 245 35.5
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 4.0e-30 136.3 338 28.1
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.4e-27 125.9 96 57.3
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 3.0e-17 93.6 100 53.0
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.6e-17 92.4 61 70.5


User provided reference genes

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