Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 1.7e-117 426.0 211 100.0
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 6.7e-50 201.4 151 72.2
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 8.7e-50 201.1 153 71.9
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.6e-48 196.8 153 69.9
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 3.7e-48 195.7 142 70.4
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.1e-47 194.1 134 74.6
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.8e-47 193.4 146 71.2
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.5e-46 190.3 128 75.8
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.6e-46 189.5 134 73.1
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.0e-45 187.6 147 68.7
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 2.2e-45 186.4 133 70.7
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.9e-45 186.0 128 75.0
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 6.5e-45 184.9 134 70.9
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.4e-44 183.7 134 70.1
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.9e-44 183.3 129 72.9
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.9e-44 183.3 133 69.9
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.2e-44 182.2 134 70.1
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 4.2e-44 182.2 163 63.8
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.5e-44 181.8 152 66.4
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.5e-44 181.8 152 66.4
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 5.5e-44 181.8 133 69.2
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 7.1e-44 181.4 152 65.8
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 9.3e-44 181.0 128 71.1
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 9.3e-44 181.0 142 70.4
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.2e-43 180.6 152 62.5
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 2.7e-43 179.5 128 72.7
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 4.6e-43 178.7 130 72.3
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 7.9e-43 177.9 132 65.2
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.0e-42 177.6 152 63.2
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.8e-42 176.8 129 71.3
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.8e-42 176.8 134 67.9
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 2.3e-42 176.4 128 67.2
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.3e-42 176.4 137 65.7
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 2.3e-42 176.4 157 63.1
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 3.9e-42 175.6 137 67.2
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.9e-42 175.6 135 68.1
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 3.9e-42 175.6 130 70.8
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 5.1e-42 175.3 134 63.4
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 5.1e-42 175.3 147 62.6
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 6.7e-42 174.9 134 66.4
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.7e-42 174.5 136 66.9
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.7e-42 174.5 129 72.9
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.1e-41 174.1 128 65.6
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.5e-41 173.7 132 67.4
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.5e-41 173.7 134 65.7
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.5e-41 173.7 143 65.0
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.9e-41 173.3 128 64.8
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 1.9e-41 173.3 129 66.7
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.9e-41 173.3 128 71.9
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.5e-41 172.9 128 64.8
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.5e-41 172.9 134 67.2
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 2.5e-41 172.9 132 66.7
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 4.3e-41 172.2 134 61.9
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 7.4e-41 171.4 130 70.0
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 9.7e-41 171.0 129 69.0
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 1.3e-40 170.6 134 65.7
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.6e-40 170.2 134 64.9
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.2e-40 169.9 128 67.2
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 2.8e-40 169.5 130 66.2
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 4.8e-40 168.7 139 62.6
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 4.8e-40 168.7 128 63.3
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 6.3e-40 168.3 129 68.2
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-39 167.5 122 73.0
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 2.4e-39 166.4 133 63.2
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 6.9e-39 164.9 143 58.7
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 1.2e-38 164.1 131 70.2
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.5e-38 163.7 141 58.9
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 3.4e-38 162.5 136 61.8
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 3.4e-38 162.5 128 63.3
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 7.7e-38 161.4 151 57.0
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.0e-37 161.0 128 63.3
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.3e-37 160.6 148 57.4
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.3e-37 160.6 132 59.8
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.3e-37 160.6 154 57.8
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 2.2e-37 159.8 148 57.4
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 2.2e-37 159.8 148 56.8
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 2.2e-37 159.8 148 56.8
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.8e-37 159.1 151 56.3
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.1e-36 157.5 135 60.0
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.9e-36 156.8 157 55.4
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 2.5e-36 156.4 155 55.5
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 2.5e-36 156.4 135 59.3
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.5e-36 156.4 157 56.1
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 7.2e-36 154.8 146 56.8
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 4.6e-35 152.1 157 55.4
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 4.6e-35 152.1 146 55.5
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 6.1e-35 151.8 141 58.9
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.4e-34 150.6 148 55.4
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 1.4e-34 150.6 133 58.6
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.4e-34 150.6 142 57.7
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.4e-34 150.6 141 58.2
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.8e-34 150.2 157 54.1
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.3e-34 149.8 145 60.0
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 3.0e-34 149.4 137 55.5
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.0e-34 149.4 141 57.4
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 5.1e-34 148.7 144 54.9
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.7e-34 148.3 105 74.3
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 4.3e-33 145.6 152 52.6
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 7.4e-33 144.8 128 60.9
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 1.3e-32 144.1 122 54.1
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.7e-32 143.7 128 61.7
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.7e-32 143.7 142 54.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 3.7e-32 142.5 146 54.8
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 4.5e-30 135.6 138 52.2
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 5.5e-28 128.6 119 56.3
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 5.5e-28 128.6 88 76.1
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.0e-26 122.9 137 51.1
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.1e-25 120.9 82 70.7
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.5e-25 120.6 137 50.4
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 2.6e-25 119.8 102 58.8
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.8e-24 116.3 132 46.2
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 8.2e-24 114.8 97 59.8
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 5.3e-23 112.1 75 65.3
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.9e-22 108.6 82 65.9
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 2.9e-21 106.3 163 37.4
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 6.5e-21 105.1 89 58.4
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.9e-20 103.6 118 44.1
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.2e-19 100.9 118 44.9
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 1.5e-17 94.0 135 36.3
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 2.6e-17 93.2 146 40.4
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 2.6e-17 93.2 53 94.3
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 2.6e-17 93.2 83 53.0
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 5.7e-17 92.0 163 35.6
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.6e-14 84.0 138 37.0
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 2.5e-12 76.6 118 32.2
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 4.2e-12 75.9 53 79.2
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 9.4e-12 74.7 56 67.9
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.7e-11 73.2 53 71.7
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 3.7e-08 62.8 64 54.7
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.1e-07 59.3 90 38.9
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.1e-07 59.3 90 38.9
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 4.1e-07 59.3 90 38.9
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 9.1e-07 58.2 105 38.1


User provided reference genes

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