Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036347.1 Olea europaea HOM05D006661 ORTHO05D008369 7.0e-59 230.3 110 100.0
MSTRG.11669 Avicennia marina HOM05D006661 ORTHO05D008369 3.6e-55 218.0 110 93.6
Migut.A00149 Erythranthe guttata HOM05D006661 ORTHO05D008369 9.8e-53 209.9 110 89.1
Nitab4.5_0000359g0060 Nicotiana tabacum HOM05D006661 ORTHO05D008369 6.3e-52 207.2 110 89.1
Actinidia01201 Actinidia chinensis HOM05D006661 ORTHO05D008369 8.3e-52 206.8 108 88.0
SalBow4G0568 Salvia bowleyana HOM05D006661 ORTHO05D008369 8.3e-52 206.8 110 88.2
Rhsim11G0046400 Rhododendron simsii HOM05D006661 ORTHO05D008369 1.1e-51 206.5 110 86.4
CSS0024744 Camellia sinensis var. sinensis HOM05D006661 ORTHO05D008369 1.4e-51 206.1 110 88.2
Peaxi162Scf00436g00823 Petunia axillaris HOM05D006661 ORTHO05D008369 1.4e-51 206.1 110 88.2
Psat1g192360 Pisum sativum HOM05D006661 ORTHO05D008369 1.4e-51 206.1 110 87.3
Hund03354 Selenicereus undatus HOM05D006661 ORTHO05D008369 1.4e-51 206.1 110 88.2
TPR.G20633 Trifolium pratense HOM05D006661 ORTHO05D008369 1.4e-51 206.1 110 87.3
CAN.G6.20 Capsicum annuum HOM05D006661 ORTHO05D008369 1.8e-51 205.7 110 88.2
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea HOM05D006661 ORTHO05D008369 3.1e-51 204.9 110 87.3
Duzib187G1697 Durio zibethinus HOM05D006661 ORTHO05D008369 3.1e-51 204.9 110 88.2
SGA_v2.0_scaffold88G27220 Striga asiatica HOM05D006661 ORTHO05D008369 4.1e-51 204.5 110 87.3
Thecc.09G051500 Theobroma cacao HOM05D006661 ORTHO05D008369 7.0e-51 203.8 110 87.3
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea HOM05D006661 ORTHO05D008369 9.2e-51 203.4 110 86.4
Cc08_g10380 Coffea canephora HOM05D006661 ORTHO05D008369 1.2e-50 203.0 110 86.4
Gohir.D06G089000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 1.2e-50 203.0 110 86.4
Medtr2g018310 Medicago truncatula HOM05D006661 ORTHO05D008369 1.2e-50 203.0 108 87.0
PSO063G2325 Papaver somniferum HOM05D006661 ORTHO05D008369 2.0e-50 202.2 108 87.0
unitig_748.g7518 Utricularia gibba HOM05D006661 ORTHO05D008369 2.0e-50 202.2 108 86.1
Nn6g35396 Nelumbo nucifera HOM05D006661 ORTHO05D008369 2.7e-50 201.8 110 86.4
Solyc08g065640.3 Solanum lycopersicum HOM05D006661 ORTHO05D008369 2.7e-50 201.8 110 85.5
PGSC0003DMG400002199 Solanum tuberosum HOM05D006661 ORTHO05D008369 2.7e-50 201.8 110 85.5
Ca_00502_v3 Cicer arietinum L. HOM05D006661 ORTHO05D008369 3.5e-50 201.4 108 86.1
Glyma.13G222200 Glycine max HOM05D006661 ORTHO05D008369 3.5e-50 201.4 110 84.5
Gohir.A06G090000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 3.5e-50 201.4 110 85.5
Ciclev10009515m.g Citrus clementina HOM05D006661 ORTHO05D008369 4.5e-50 201.1 110 85.5
Sabra06G0181100 Salix brachista HOM05D006661 ORTHO05D008369 4.5e-50 201.1 110 85.5
PGR031G2394 Punica granatum HOM05D006661 ORTHO05D008369 5.9e-50 200.7 110 84.5
Sopen08g019360 Solanum pennellii HOM05D006661 ORTHO05D008369 7.8e-50 200.3 110 84.5
TWI34G0500 Tripterygium wilfordii HOM05D006661 ORTHO05D008369 7.8e-50 200.3 110 86.4
Cfa017936 Carpinus fangiana HOM05D006661 ORTHO05D008369 1.0e-49 199.9 110 86.4
AUR62022048 Chenopodium quinoa HOM05D006661 ORTHO05D008369 1.0e-49 199.9 108 85.2
Eucgr.H03073 Eucalyptus grandis HOM05D006661 ORTHO05D008369 1.0e-49 199.9 110 85.5
Potri.018G056100 Populus trichocarpa HOM05D006661 ORTHO05D008369 1.0e-49 199.9 110 85.5
CiPaw.16G029900 Carya illinoinensis HOM05D006661 ORTHO05D008369 1.3e-49 199.5 110 86.4
Lj4g0006609 Lotus japonicus HOM05D006661 ORTHO05D008369 1.3e-49 199.5 108 85.2
QL02p001540 Quercus lobata HOM05D006661 ORTHO05D008369 1.3e-49 199.5 109 85.3
Sp4g05860 Schrenkiella parvula HOM05D006661 ORTHO05D008369 1.3e-49 199.5 110 83.6
HanXRQChr09g0251201 Helianthus annuus HOM05D006661 ORTHO05D008369 1.7e-49 199.1 110 83.6
Os01g0559000 Oryza sativa ssp. japonica HOM05D006661 ORTHO05D008369 1.7e-49 199.1 110 83.6
AUR62009178 Chenopodium quinoa HOM05D006661 ORTHO05D008369 2.3e-49 198.7 108 84.3
Lsat_1_v5_gn_6_13140 Lactuca sativa HOM05D006661 ORTHO05D008369 5.0e-49 197.6 110 82.7
Nitab4.5_0001179g0020 Nicotiana tabacum HOM05D006661 ORTHO05D008369 5.0e-49 197.6 110 88.2
Aqoxy7G01325 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 6.6e-49 197.2 110 84.5
AL4G18030 Arabidopsis lyrata HOM05D006661 ORTHO05D008369 8.6e-49 196.8 110 83.6
BcaB06g29613 Brassica carinata HOM05D006661 ORTHO05D008369 8.6e-49 196.8 110 83.6
BcaC02g08315 Brassica carinata HOM05D006661 ORTHO05D008369 8.6e-49 196.8 110 83.6
C04p55870 Brassica napus HOM05D006661 ORTHO05D008369 8.6e-49 196.8 110 83.6
BolC4t27119H Brassica oleracea HOM05D006661 ORTHO05D008369 8.6e-49 196.8 110 83.6
Thhalv10002098m.g Eutrema salsugineum HOM05D006661 ORTHO05D008369 8.6e-49 196.8 110 83.6
CsaV3_2G025680 Cucumis sativus L. HOM05D006661 ORTHO05D008369 1.1e-48 196.4 110 83.6
PSO832G3146 Papaver somniferum HOM05D006661 ORTHO05D008369 1.1e-48 196.4 108 84.3
Gorai.010G102800 Gossypium raimondii HOM05D006661 ORTHO05D008369 1.5e-48 196.1 110 85.5
ECA233G6145 Erigeron canadensis HOM05D006661 ORTHO05D008369 1.9e-48 195.7 110 80.9
Lalb_Chr18g0055101 Lupinus albus HOM05D006661 ORTHO05D008369 1.9e-48 195.7 110 82.7
TAR383G0029 Trochodendron aralioides HOM05D006661 ORTHO05D008369 1.9e-48 195.7 110 85.5
Carub.0004s0581 Capsella rubella HOM05D006661 ORTHO05D008369 3.3e-48 194.9 110 81.8
Zm00001eb162230 Zea mays HOM05D006661 ORTHO05D008369 3.3e-48 194.9 110 82.7
Aa31LG5G9740 Aethionema arabicum HOM05D006661 ORTHO05D008369 4.3e-48 194.5 110 82.7
CANSAT25G2346 Cannabis sativa HOM05D006661 ORTHO05D008369 5.6e-48 194.1 110 82.7
ClCG08G016930 Citrullus lanatus HOM05D006661 ORTHO05D008369 5.6e-48 194.1 110 82.7
Sed0008959 Sechium edule HOM05D006661 ORTHO05D008369 5.6e-48 194.1 110 82.7
Atru.chr7.2017 Acer truncatum HOM05D006661 ORTHO05D008369 7.3e-48 193.7 110 82.7
CARHR287330 Cardamine hirsuta HOM05D006661 ORTHO05D008369 1.2e-47 193.0 110 81.8
GSVIVG01035347001 Vitis vinifera HOM05D006661 ORTHO05D008369 1.2e-47 193.0 110 81.8
Phvul.006G168200 Phaseolus vulgaris HOM05D006661 ORTHO05D008369 3.6e-47 191.4 110 79.1
ATR0789G168 Amborella trichopoda HOM05D006661 ORTHO05D008369 4.7e-47 191.0 108 80.6
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 8.0e-47 190.3 107 81.3
VMungo0540G1431 Vigna mungo HOM05D006661 ORTHO05D008369 8.0e-47 190.3 110 79.1
CDE07G0448 Ceratophyllum demersum HOM05D006661 ORTHO05D008369 1.4e-46 189.5 110 81.8
FvH4_2g32150 Fragaria vesca HOM05D006661 ORTHO05D008369 1.4e-46 189.5 110 81.8
FAN24G0958 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.4e-46 189.5 110 81.8
vmacro00160 Vaccinium macrocarpon HOM05D006661 ORTHO05D008369 3.0e-46 188.3 101 85.1
EL10Ac2g03924 Beta vulgaris HOM05D006661 ORTHO05D008369 4.0e-46 188.0 113 78.8
FAN15G2916 Fragaria x ananassa HOM05D006661 ORTHO05D008369 4.0e-46 188.0 110 81.8
FAN20G2753 Fragaria x ananassa HOM05D006661 ORTHO05D008369 4.0e-46 188.0 110 81.8
RcHm_v2.0_Chr6g0310531 Rosa chinensis HOM05D006661 ORTHO05D008369 6.8e-46 187.2 110 81.8
Lj8A552G6 Lonicera japonica HOM05D006661 ORTHO05D008369 2.6e-45 185.3 96 90.6
Prupe.1G414600 Prunus persica HOM05D006661 ORTHO05D008369 1.7e-44 182.6 110 79.1
THA.LOC104803733 Tarenaya hassleriana HOM05D006661 ORTHO05D008369 1.7e-44 182.6 103 81.6
Manes.16G078200 Manihot esculenta HOM05D006661 ORTHO05D008369 2.2e-44 182.2 100 84.0
Duzib168G0126 Durio zibethinus HOM05D000575 ORTHO05D008369 3.7e-44 181.4 96 86.5
MD08G1044700 Malus domestica HOM05D006661 ORTHO05D008369 3.7e-44 181.4 110 78.2
Haze_18212 Corylus avellana HOM05D006661 ORTHO05D008369 6.4e-44 180.6 96 87.5
HPP92_005507 Vanilla planifolia HOM05D006661 ORTHO05D008369 8.3e-44 180.3 110 75.5
DCAR_003069 Daucus carota HOM05D006661 ORTHO05D008369 1.2e-42 176.4 95 83.2
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 1.2e-42 176.4 96 82.3
Cpa.g.sc7.195 Carica papaya HOM05D006661 ORTHO05D008369 1.6e-42 176.0 98 83.7
CANSAT78G0664 Cannabis sativa HOM05D006661 ORTHO05D008369 2.0e-42 175.6 96 84.4
CANSAT25G1095 Cannabis sativa HOM05D006661 ORTHO05D008369 2.7e-42 175.3 96 84.4
AT2G25950 Arabidopsis thaliana HOM05D006661 ORTHO05D008369 6.0e-42 174.1 96 83.3
A04p20170 Brassica napus HOM05D006661 ORTHO05D008369 6.0e-42 174.1 96 83.3
BraA04t17597Z Brassica rapa HOM05D006661 ORTHO05D008369 6.0e-42 174.1 96 83.3
MELO3C030341.2 Cucumis melo HOM05D006661 ORTHO05D008369 6.0e-42 174.1 92 85.9
SEGI_00170 Sequoiadendron giganteum HOM05D006661 ORTHO05D008369 1.7e-41 172.6 103 74.8
FAN27G1843 Fragaria x ananassa HOM05D006661 ORTHO05D008369 8.6e-41 170.2 95 82.1
Aqoxy6G02410 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 2.8e-39 165.2 110 73.6
QL02p001525 Quercus lobata HOM05D006661 ORTHO05D008369 5.4e-35 151.0 95 74.7
Pp3c22_18330 Physcomitrium patens HOM05D006661 ORTHO05D008369 2.1e-34 149.1 102 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis HOM05D006661 ORTHO05D008369 2.7e-34 148.7 108 64.8
CBR_g22258 Chara braunii HOM05D006661 ORTHO05D008369 6.6e-33 144.1 108 58.3
SMO169G0297 Selaginella moellendorffii HOM05D006661 ORTHO05D008369 9.5e-32 140.2 96 64.6
MCO14G523 Micromonas commoda HOM05D006661 ORTHO05D008369 5.4e-19 97.8 88 47.7
PRCOL_00000611 Prasinoderma coloniale HOM05D006661 ORTHO05D008369 3.3e-16 88.6 99 42.4
Sc23g0005520 Simmondsia chinensis HOM05D006661 ORTHO05D008369 1.2e-13 80.1 39 92.3
Cre02.g110450 Chlamydomonas reinhardtii HOM05D006661 ORTHO05D008369 5.8e-13 77.8 107 39.3
Sabra06G0180500 Salix brachista HOM05D006661 ORTHO05D008369 3.8e-12 75.1 39 89.7
Prupe.1G326300 Prunus persica HOM05D006661 ORTHO05D008369 1.4e-06 56.6 35 80.0


User provided reference genes

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