Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 1.3e-203 713.0 399 100.0
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 1.2e-79 301.2 397 49.9
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 2.4e-69 266.9 405 45.4
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.0e-67 261.5 402 47.8
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 8.4e-54 215.3 427 40.7
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.8e-51 207.6 449 39.6
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 2.9e-46 190.3 352 43.2
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 5.0e-46 189.5 426 39.0
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 6.5e-46 189.1 448 37.7
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.4e-45 188.0 451 36.4
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 4.2e-45 186.4 202 54.0
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 2.7e-44 183.7 439 40.1
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 2.7e-44 183.7 423 38.8
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 3.6e-44 183.3 248 47.6
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 7.9e-44 182.2 415 38.8
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 2.3e-43 180.6 419 38.7
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 4.8e-41 172.9 489 34.2
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 6.3e-41 172.6 405 36.8
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.5e-39 167.9 252 42.5
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.0e-38 165.2 403 37.7
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.3e-38 164.9 457 33.5
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 2.9e-38 163.7 433 35.3
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 5.0e-38 162.9 421 34.7
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 6.5e-38 162.5 412 35.7
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 8.5e-38 162.2 436 34.9
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.4e-37 161.4 287 38.7
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.4e-37 161.4 212 46.7
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.2e-37 160.2 408 35.5
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 4.2e-37 159.8 257 40.1
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 4.2e-37 159.8 408 35.3
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 3.6e-36 156.8 406 36.7
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 3.0e-35 153.7 408 38.2
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.5e-34 151.4 421 35.6
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 2.0e-34 151.0 406 35.7
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 7.4e-34 149.1 254 42.5
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 8.2e-33 145.6 403 35.2
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.4e-32 144.8 427 32.3
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.4e-32 144.8 406 32.5
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.8e-32 144.4 248 43.5
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 1.6e-31 141.4 414 34.1
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 2.0e-31 141.0 445 33.9
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 2.6e-31 140.6 230 40.9
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 2.9e-30 137.1 191 45.5
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 8.5e-30 135.6 420 34.0
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 8.5e-30 135.6 466 32.4
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 1.5e-29 134.8 465 33.1
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 2.5e-29 134.0 247 41.3
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 2.5e-29 134.0 241 41.9
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 4.2e-29 133.3 403 34.0
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 4.2e-29 133.3 411 33.1
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 5.5e-29 132.9 391 35.0
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 7.2e-29 132.5 397 33.2
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.1e-28 131.0 411 33.6
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 2.7e-28 130.6 405 33.6
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 4.7e-28 129.8 251 39.0
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.4e-27 128.3 431 36.0
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 2.3e-27 127.5 446 29.4
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 5.2e-27 126.3 435 32.6
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 5.2e-27 126.3 411 34.3
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 5.7e-26 122.9 215 43.7
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 5.7e-26 122.9 404 33.9
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 9.7e-26 122.1 435 31.5
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 9.7e-26 122.1 408 32.4
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.1e-24 118.6 259 39.0
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.1e-24 117.1 413 31.0
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 4.5e-23 113.2 222 42.3
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 3.8e-22 110.2 258 34.5
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 3.8e-22 110.2 417 30.2
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 7.2e-21 105.9 404 31.9
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 2.7e-20 104.0 274 33.6
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 8.0e-20 102.4 398 31.9
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 8.0e-20 102.4 243 34.6
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.8e-19 101.3 212 38.7
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.0e-19 100.1 253 36.8
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 4.4e-18 96.7 253 33.2
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 5.7e-18 96.3 464 33.0
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 9.8e-18 95.5 409 30.8
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 2.8e-17 94.0 436 28.4
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 8.3e-17 92.4 425 30.8
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.8e-16 91.3 250 35.6
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.4e-16 90.9 417 29.0
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 3.1e-16 90.5 244 35.2
Oeu016743.1 Olea europaea HOM05D002134 ORTHO05D008658 2.7e-15 87.4 65 70.8
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.0e-14 85.5 419 28.6
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.3e-14 85.1 215 32.1
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.7e-14 84.7 222 34.7
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 2.2e-14 84.3 215 33.0
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 3.8e-14 83.6 224 33.0
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 3.8e-14 83.6 157 38.9
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 5.0e-14 83.2 256 31.2
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 5.0e-14 83.2 228 33.3
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 3.2e-13 80.5 225 34.7
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 7.2e-13 79.3 216 33.3
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 1.2e-12 78.6 255 32.9
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 1.2e-12 78.6 255 32.9
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 3.6e-12 77.0 180 36.7
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 4.7e-12 76.6 56 73.2
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 8.0e-12 75.9 241 32.0
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 8.0e-12 75.9 416 27.6
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.0e-11 75.5 413 26.6
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 1.8e-11 74.7 207 37.7
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.6e-10 70.9 227 31.3
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.4e-10 70.5 137 38.0
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.3e-09 68.6 337 26.7
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.7e-09 68.2 337 29.1
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.8e-09 67.4 179 32.4
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.8e-09 67.4 179 32.4
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 1.1e-08 65.5 55 58.2
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 7.7e-07 59.3 187 31.6
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.7e-06 58.2 319 25.1
AagrBONN_evm.TU.Sc2ySwM_362.1405 Anthoceros agrestis HOM05D051179 ORTHO05D038399 2.3e-06 57.8 102 41.2


User provided reference genes

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