Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 3.5e-55 218.0 106 100.0
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 8.0e-52 206.8 100 100.0
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 2.4e-40 168.7 101 75.2
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 1.3e-38 162.9 106 70.8
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 2.3e-38 162.2 98 73.5
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 5.0e-38 161.0 96 72.9
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 8.6e-38 160.2 98 73.5
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 8.6e-38 160.2 97 75.3
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 8.6e-38 160.2 99 72.7
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 8.6e-38 160.2 100 72.0
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 1.1e-37 159.8 102 67.6
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 1.1e-37 159.8 106 67.0
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 1.5e-37 159.5 108 68.5
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 1.9e-37 159.1 101 70.3
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 1.9e-37 159.1 102 71.6
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 2.5e-37 158.7 99 75.8
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 3.3e-37 158.3 99 73.7
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 4.3e-37 157.9 99 72.7
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 5.6e-37 157.5 104 69.2
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 5.6e-37 157.5 106 66.0
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 7.3e-37 157.1 100 74.0
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 7.3e-37 157.1 97 76.3
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 9.5e-37 156.8 100 73.0
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 1.2e-36 156.4 100 73.0
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 1.6e-36 156.0 106 64.2
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 2.1e-36 155.6 103 71.8
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 6.1e-36 154.1 87 80.5
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 1.0e-35 153.3 101 70.3
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 1.4e-35 152.9 101 71.3
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 1.4e-35 152.9 101 72.3
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 1.8e-35 152.5 104 67.3
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 2.3e-35 152.1 101 70.3
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 2.3e-35 152.1 87 78.2
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 3.0e-35 151.8 98 72.4
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 8.9e-35 150.2 91 73.6
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 1.5e-34 149.4 97 72.2
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 2.0e-34 149.1 87 75.9
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 2.6e-34 148.7 94 70.2
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 2.6e-34 148.7 98 67.3
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 2.6e-34 148.7 98 70.4
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 4.4e-34 147.9 105 66.7
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 4.4e-34 147.9 105 66.7
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 4.4e-34 147.9 94 72.3
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 5.7e-34 147.5 88 75.0
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 7.5e-34 147.1 105 66.7
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 9.8e-34 146.7 98 67.3
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.3e-33 146.4 105 65.7
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 1.3e-33 146.4 92 73.9
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 1.7e-33 146.0 98 68.4
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 1.7e-33 146.0 87 71.3
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 1.7e-33 146.0 99 66.7
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 2.2e-33 145.6 102 65.7
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 2.2e-33 145.6 103 62.1
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 2.2e-33 145.6 102 66.7
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 2.9e-33 145.2 98 67.3
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 8.3e-33 143.7 103 65.0
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 1.4e-32 142.9 75 82.7
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 1.4e-32 142.9 96 66.7
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 2.4e-32 142.1 95 67.4
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.2e-32 141.7 92 69.6
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 5.4e-32 141.0 98 67.3
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 2.0e-31 139.0 88 70.5
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 2.7e-31 138.7 91 67.0
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 2.7e-31 138.7 100 62.0
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 4.6e-31 137.9 95 65.3
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 5.9e-31 137.5 95 67.4
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 5.9e-31 137.5 103 59.2
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 7.8e-31 137.1 99 66.7
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 1.7e-30 136.0 87 69.0
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 1.7e-30 136.0 92 69.6
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 3.0e-30 135.2 88 64.8
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 3.9e-30 134.8 100 60.0
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 5.0e-30 134.4 97 59.8
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 2.5e-29 132.1 96 61.5
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 3.3e-29 131.7 92 59.8
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 7.3e-29 130.6 76 71.1
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 7.3e-29 130.6 76 69.7
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 9.5e-29 130.2 76 69.7
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 1.2e-28 129.8 76 71.1
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 1.2e-28 129.8 76 71.1
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 1.2e-28 129.8 76 71.1
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 1.2e-28 129.8 100 55.0
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 1.2e-28 129.8 76 71.1
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 1.2e-28 129.8 76 69.7
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 1.2e-28 129.8 76 68.4
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 1.2e-28 129.8 97 63.9
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 1.6e-28 129.4 76 69.7
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 1.6e-28 129.4 98 58.2
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 1.6e-28 129.4 98 58.2
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 2.1e-28 129.0 76 69.7
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 2.1e-28 129.0 76 69.7
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 2.1e-28 129.0 76 69.7
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 2.1e-28 129.0 76 69.7
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 2.1e-28 129.0 76 69.7
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 2.1e-28 129.0 98 58.2
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 2.8e-28 128.6 98 58.2
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 4.7e-28 127.9 100 54.0
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 4.7e-28 127.9 100 54.0
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 6.2e-28 127.5 76 69.7
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 6.2e-28 127.5 76 69.7
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 6.2e-28 127.5 76 69.7
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 6.2e-28 127.5 76 69.7
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 6.2e-28 127.5 76 69.7
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 6.2e-28 127.5 79 67.1
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 8.0e-28 127.1 100 54.0
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 1.4e-27 126.3 93 55.9
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 1.4e-27 126.3 92 55.4
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 8.9e-27 123.6 83 63.9
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 2.6e-26 122.1 99 63.6
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 2.6e-26 122.1 99 63.6
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 5.8e-26 120.9 97 58.8
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 1.4e-24 116.3 99 51.5
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 2.4e-24 115.5 59 88.1
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 1.3e-22 109.8 80 67.5
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 1.7e-22 109.4 95 49.5
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 5.0e-22 107.8 95 47.4
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 2.8e-20 102.1 81 53.1
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 8.1e-20 100.5 77 53.2
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 4.9e-17 91.3 95 41.1
SHI04057 Sapria himalayana HOM05D007237 ORTHO05D008854 1.9e-16 89.4 100 41.0
CAN.G322.111 Capsicum annuum HOM05D001848 ORTHO05D001295 9.9e-10 67.0 101 34.7
Solyc01g109390.3 Solanum lycopersicum HOM05D001848 ORTHO05D001295 2.4e-08 62.4 100 35.0
Nitab4.5_0011417g0010 Nicotiana tabacum HOM05D001848 ORTHO05D001295 3.2e-08 62.0 101 30.7
Sopen01g051580 Solanum pennellii HOM05D001848 ORTHO05D001295 5.4e-08 61.2 93 35.5
PGSC0003DMG400025168 Solanum tuberosum HOM05D001848 ORTHO05D001295 7.1e-08 60.8 96 32.3
Phvul.007G001800 Phaseolus vulgaris HOM05D001848 ORTHO05D001295 2.7e-07 58.9 68 39.7
Sc17g0001710 Simmondsia chinensis HOM05D001848 ORTHO05D001295 1.7e-06 56.2 108 31.5
Rhsim12G0036500 Rhododendron simsii HOM05D001848 ORTHO05D001295 2.3e-06 55.8 64 42.2
Cfa008554 Carpinus fangiana HOM05D001848 ORTHO05D001295 3.0e-06 55.5 92 34.8
Dinv44234 Davidia involucrata HOM05D000090 ORTHO05D001584 3.0e-06 55.5 58 43.1
GSVIVG01031677001 Vitis vinifera HOM05D001848 ORTHO05D001295 3.0e-06 55.5 58 44.8
arahy.Tifrunner.gnm1.ann1.FN75LP Arachis hypogaea HOM05D001848 ORTHO05D001295 3.9e-06 55.1 98 35.7
Hma1.2p1_0412F.1_g147100 Hydrangea macrophylla HOM05D001848 ORTHO05D001295 6.6e-06 54.3 65 38.5
Haze_11072 Corylus avellana HOM05D001848 ORTHO05D001295 8.6e-06 53.9 79 38.0
Mapoly0013s0188 Marchantia polymorpha HOM05D012754 ORTHO05D252712 8.6e-06 53.9 75 38.7


User provided reference genes

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