Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 4.0e-145 518.1 261 100.0
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 2.2e-111 406.0 261 80.5
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 8.2e-58 228.0 260 51.5
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.2e-56 224.2 261 52.9
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 2.9e-47 193.0 265 46.4
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 6.5e-47 191.8 272 47.4
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 1.4e-41 174.1 200 53.5
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 1.8e-41 173.7 262 45.8
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 5.4e-41 172.2 279 45.2
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.7e-40 169.9 260 43.1
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.3e-39 167.5 264 43.9
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 2.5e-38 163.3 269 43.9
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 9.5e-38 161.4 264 43.2
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 9.5e-38 161.4 143 62.9
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 2.1e-37 160.2 216 48.6
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 4.7e-37 159.1 265 42.3
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 4.0e-36 156.0 268 40.7
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 8.9e-36 154.8 180 48.9
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 8.9e-36 154.8 260 42.3
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.5e-35 154.1 282 41.1
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.4e-35 152.5 280 39.6
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 5.7e-35 152.1 267 43.1
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 5.7e-35 152.1 264 42.0
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 2.2e-34 150.2 280 39.3
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 3.7e-34 149.4 274 42.3
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 6.4e-34 148.7 249 42.2
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 4.1e-33 146.0 249 42.2
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 2.3e-31 140.2 276 39.9
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.9e-31 139.4 263 40.3
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 2.5e-30 136.7 133 56.4
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.3e-30 135.2 221 43.0
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 7.3e-30 135.2 264 39.4
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 2.1e-29 133.7 273 37.7
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.6e-29 132.9 148 52.7
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.0e-28 131.3 263 38.8
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.4e-28 131.0 236 41.5
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 2.3e-28 130.2 253 38.7
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 3.1e-28 129.8 265 38.5
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 6.8e-28 128.6 255 39.6
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 8.9e-28 128.3 263 37.3
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.7e-26 122.9 268 36.2
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 1.9e-25 120.6 270 35.6
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.7e-24 116.7 170 43.5
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 3.5e-24 116.3 244 37.3
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 6.0e-24 115.5 259 36.7
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.0e-24 115.5 237 39.2
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 6.0e-24 115.5 270 35.2
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 7.8e-24 115.2 262 36.6
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 1.7e-23 114.0 233 39.1
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 3.0e-23 113.2 257 36.6
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 3.0e-23 113.2 258 36.8
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 3.9e-23 112.8 231 38.5
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.9e-23 112.8 170 41.8
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 5.0e-23 112.5 211 41.7
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.6e-23 111.7 160 44.4
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 1.9e-22 110.5 233 36.5
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 2.5e-22 110.2 232 39.7
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 3.3e-22 109.8 239 38.5
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 3.3e-22 109.8 235 37.9
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 5.6e-22 109.0 263 35.4
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 7.3e-22 108.6 244 36.1
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 7.3e-22 108.6 156 43.6
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 9.5e-22 108.2 227 37.0
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 9.5e-22 108.2 260 35.0
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.2e-21 107.8 214 38.8
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.8e-21 106.7 236 37.3
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 4.7e-21 105.9 237 37.6
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 6.2e-21 105.5 257 35.8
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 1.1e-20 104.8 231 35.1
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 1.8e-20 104.0 176 43.2
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 2.3e-20 103.6 267 31.1
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 3.1e-20 103.2 210 37.6
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 6.8e-20 102.1 266 32.7
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 6.8e-20 102.1 253 37.2
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 8.9e-20 101.7 233 35.6
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 1.2e-19 101.3 151 44.4
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 2.6e-19 100.1 261 34.1
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 5.8e-19 99.0 207 36.2
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 7.5e-19 98.6 262 31.7
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 9.8e-19 98.2 216 37.5
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 9.8e-19 98.2 207 36.2
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.3e-18 97.8 270 31.5
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.3e-18 97.8 208 37.0
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.7e-18 97.4 195 36.4
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.2e-18 97.1 155 41.9
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 2.9e-18 96.7 269 33.8
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 6.4e-18 95.5 234 36.8
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 8.3e-18 95.1 161 39.1
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 2.4e-17 93.6 232 34.9
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 2.4e-17 93.6 218 33.5
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.2e-17 93.2 169 39.1
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.2e-17 93.2 136 43.4
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.1e-17 92.8 161 38.5
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 4.1e-17 92.8 114 55.3
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 9.2e-17 91.7 277 33.9
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 1.2e-16 91.3 203 37.4
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 1.2e-16 91.3 209 37.3
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.6e-16 90.9 260 32.3
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.1e-16 90.5 203 38.9
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 2.7e-16 90.1 239 34.7
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 3.5e-16 89.7 71 63.4
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 4.6e-16 89.4 192 38.5
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 4.6e-16 89.4 151 44.4
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 4.6e-16 89.4 238 34.9
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 6.0e-16 89.0 146 40.4
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 1.3e-15 87.8 185 38.4
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 1.3e-15 87.8 98 48.0
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 3.0e-15 86.7 147 40.8
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 3.0e-15 86.7 144 40.3
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 3.0e-15 86.7 160 38.1
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 3.9e-15 86.3 152 42.8
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 5.1e-15 85.9 142 40.8
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 5.1e-15 85.9 160 36.2
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 8.6e-15 85.1 266 29.7
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 1.9e-14 84.0 267 31.1
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 2.5e-14 83.6 236 33.9
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 2.1e-13 80.5 251 32.3
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 3.6e-13 79.7 154 40.9
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 3.6e-13 79.7 255 30.6
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 4.7e-13 79.3 238 30.3
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 6.2e-13 79.0 263 30.8
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 8.1e-13 78.6 169 34.9
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 5.2e-12 75.9 67 58.2
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 2.0e-11 73.9 158 36.1
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 5.8e-11 72.4 211 34.1
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.2e-10 70.5 136 37.5
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 1.4e-09 67.8 85 56.5
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 1.4e-09 67.8 171 30.4
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 1.9e-09 67.4 231 28.6
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 1.9e-09 67.4 104 41.3
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 5.4e-09 65.9 170 35.9
PSO339G1969 Papaver somniferum HOM05D004206 ORTHO05D003325 5.4e-09 65.9 137 37.2
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 7.1e-09 65.5 223 28.3
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 9.2e-09 65.1 237 30.4
SalBow8G2190 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.6e-08 64.3 68 48.5
Nn2g12918 Nelumbo nucifera HOM05D004206 ORTHO05D003325 2.7e-08 63.5 129 37.2
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 4.6e-08 62.8 122 37.7
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 4.6e-08 62.8 64 57.8
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 6.0e-08 62.4 130 38.5
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 6.0e-08 62.4 138 35.5
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 1.0e-07 61.6 188 29.3
SEGI_11879 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 1.0e-07 61.6 150 34.0
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 1.3e-07 61.2 140 36.4
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.7e-07 60.8 53 50.9
MBI14_g07165_MAGBIO Magnolia biondii HOM05D039687 ORTHO05D003325 1.7e-07 60.8 295 26.4
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 1.7e-07 60.8 154 30.5
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 2.3e-07 60.5 73 49.3
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 2.3e-07 60.5 151 32.5
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 2.3e-07 60.5 151 32.5
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 2.3e-07 60.5 151 32.5
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 2.3e-07 60.5 138 35.5
Hma1.2p1_1004F.1_g246870 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 2.3e-07 60.5 45 60.0
Lsat_1_v5_gn_2_110560 Lactuca sativa HOM05D000437 ORTHO05D003325 6.6e-07 58.9 111 36.0
DCAR_007387 Daucus carota HOM05D004206 ORTHO05D003325 8.6e-07 58.5 84 42.9
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-06 58.2 81 43.2
BcaC08g44645 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-06 58.2 86 38.4
C06p21610 Brassica napus HOM05D008508 ORTHO05D003325 1.1e-06 58.2 86 38.4
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 1.1e-06 58.2 145 35.9
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 1.1e-06 58.2 181 32.6
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 1.5e-06 57.8 173 29.5
MSTRG.7417 Avicennia marina HOM05D004206 ORTHO05D003325 1.9e-06 57.4 102 43.1
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 1.9e-06 57.4 204 30.4
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 1.9e-06 57.4 94 44.7
BcaB06g28998 Brassica carinata HOM05D008508 ORTHO05D003325 2.5e-06 57.0 130 34.6
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 2.5e-06 57.0 106 40.6
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 2.5e-06 57.0 290 26.2
BcaB02g07768 Brassica carinata HOM05D008508 ORTHO05D003325 3.3e-06 56.6 55 50.9
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 3.3e-06 56.6 123 31.7
Lsat_1_v5_gn_6_32400 Lactuca sativa HOM05D004206 ORTHO05D003325 3.3e-06 56.6 92 42.4
BcaB01g00256 Brassica carinata HOM05D008508 ORTHO05D003325 4.3e-06 56.2 71 43.7
A03p20680 Brassica napus HOM05D008508 ORTHO05D003325 5.6e-06 55.8 140 32.9
BraA03t11309Z Brassica rapa HOM05D008508 ORTHO05D003325 5.6e-06 55.8 140 32.9
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 5.6e-06 55.8 46 58.7
A04p28630 Brassica napus HOM05D008508 ORTHO05D003325 7.3e-06 55.5 117 34.2
BolC6t37349H Brassica oleracea HOM05D008508 ORTHO05D003325 7.3e-06 55.5 86 38.4
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 7.3e-06 55.5 64 45.3
AL4G33940 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 9.6e-06 55.1 123 33.3
BraA04t18340Z Brassica rapa HOM05D008508 ORTHO05D003325 9.6e-06 55.1 99 33.3


User provided reference genes

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