Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 2.2e-77 292.4 165 100.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 2.1e-75 285.8 165 92.1
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 5.1e-45 184.9 165 64.2
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-24 116.3 168 45.2
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 4.2e-23 112.1 170 42.9
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.1e-20 104.0 164 40.2
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.9e-20 103.2 149 48.3
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 6.2e-19 98.2 163 41.1
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.4e-18 96.3 171 45.0
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.5e-17 93.6 103 57.3
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 3.8e-16 89.0 170 36.5
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 8.4e-16 87.8 170 43.5
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.9e-15 86.7 171 37.4
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 5.5e-15 85.1 106 50.9
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.6e-14 83.6 176 36.4
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 7.9e-14 81.3 92 48.9
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-13 80.1 164 39.6
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 2.3e-13 79.7 95 55.8
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 2.3e-13 79.7 95 54.7
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.7e-13 78.2 124 37.9
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 8.7e-13 77.8 76 60.5
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.1e-12 77.4 84 54.8
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.5e-12 77.0 176 38.6
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.9e-12 76.6 166 40.4
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 3.3e-12 75.9 159 35.2
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.3e-12 75.9 95 50.5
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.3e-12 75.9 81 55.6
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 4.3e-12 75.5 171 37.4
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.6e-12 75.1 81 56.8
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.6e-12 75.1 85 55.3
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 5.6e-12 75.1 81 56.8
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.6e-12 75.1 83 54.2
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.6e-12 74.3 84 53.6
Nitab4.5_0000349g0170 Nicotiana tabacum HOM05D016316 ORTHO05D018871 9.6e-12 74.3 165 38.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.3e-11 73.9 85 52.9
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.3e-11 73.9 93 53.8
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 1.3e-11 73.9 183 33.9
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.6e-11 73.6 101 46.5
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.1e-11 73.2 142 39.4
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.8e-11 72.8 100 48.0
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.7e-11 72.4 79 50.6
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.8e-11 72.0 187 32.1
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.8e-11 72.0 165 32.7
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.2e-11 71.6 159 39.6
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 6.2e-11 71.6 168 33.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 8.1e-11 71.2 85 50.6
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.4e-10 70.5 158 41.1
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.8e-10 70.1 81 53.1
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.8e-10 70.1 84 51.2
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.4e-10 69.7 85 49.4
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.3e-10 68.6 83 45.8
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 9.0e-10 67.8 89 44.9
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 9.0e-10 67.8 89 44.9
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 9.0e-10 67.8 89 44.9
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 9.0e-10 67.8 85 50.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 9.0e-10 67.8 81 48.1
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 9.0e-10 67.8 93 50.5
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.2e-09 67.4 80 51.2
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.2e-09 67.4 158 36.1
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.2e-09 67.4 158 36.1
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.5e-09 67.0 113 40.7
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.5e-09 67.0 82 56.1
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 2.6e-09 66.2 87 50.6
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 2.6e-09 66.2 78 51.3
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.6e-09 66.2 74 55.4
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 3.4e-09 65.9 75 53.3
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.4e-09 65.9 82 51.2
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 5.8e-09 65.1 78 51.3
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 5.8e-09 65.1 86 50.0
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 7.6e-09 64.7 98 45.9
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 7.6e-09 64.7 81 48.1
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.0e-08 64.3 100 48.0
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.7e-08 63.5 62 56.5
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 2.9e-08 62.8 88 45.5
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 2.9e-08 62.8 78 48.7
Nitab4.5_0000349g0250 Nicotiana tabacum HOM05D016316 ORTHO05D018871 2.9e-08 62.8 117 39.3
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 3.8e-08 62.4 93 41.9
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 4.9e-08 62.0 89 42.7
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 6.5e-08 61.6 80 51.2
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 8.4e-08 61.2 78 48.7
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 1.1e-07 60.8 90 43.3
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 1.1e-07 60.8 82 50.0
SalBow3G2287 Salvia bowleyana HOM05D005967 ORTHO05D005174 1.1e-07 60.8 96 39.6
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.9e-07 60.1 95 41.1
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 1.9e-07 60.1 106 42.5
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.9e-07 60.1 106 44.3
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 1.9e-07 60.1 42 69.0
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 2.5e-07 59.7 63 54.0
PGR004G0898 Punica granatum HOM05D005967 ORTHO05D005174 2.5e-07 59.7 189 34.4
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 3.2e-07 59.3 80 41.2
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 3.2e-07 59.3 87 49.4
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 3.2e-07 59.3 149 34.2
C09p74150 Brassica napus HOM05D010528 ORTHO05D005174 5.5e-07 58.5 74 48.6
BolC9t60147H Brassica oleracea HOM05D010528 ORTHO05D005174 5.5e-07 58.5 74 48.6
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 5.5e-07 58.5 78 50.0
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 7.1e-07 58.2 85 47.1
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 7.1e-07 58.2 75 44.0
TPR.G23268 Trifolium pratense HOM05D005967 ORTHO05D005174 7.1e-07 58.2 82 45.1
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 9.3e-07 57.8 83 45.8
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.2e-06 57.4 91 41.8
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.2e-06 57.4 81 49.4
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 1.2e-06 57.4 75 46.7
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 1.2e-06 57.4 79 45.6
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.6e-06 57.0 51 58.8
A10p33240 Brassica napus HOM05D010528 ORTHO05D005174 2.7e-06 56.2 74 47.3
BraA10t45352Z Brassica rapa HOM05D010528 ORTHO05D005174 2.7e-06 56.2 74 47.3
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 2.7e-06 56.2 58 53.4
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 2.7e-06 56.2 61 50.8
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 3.5e-06 55.8 83 47.0
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 3.5e-06 55.8 38 65.8
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 3.5e-06 55.8 90 44.4
Thhalv10015059m.g Eutrema salsugineum HOM05D010528 ORTHO05D005174 3.5e-06 55.8 78 46.2
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 4.6e-06 55.5 80 50.0
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 4.6e-06 55.5 66 50.0
Gohir.A09G156500 Gossypium hirsutum HOM05D036294 ORTHO05D036268 7.9e-06 54.7 80 42.5
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 7.9e-06 54.7 98 41.8
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 7.9e-06 54.7 59 50.8


User provided reference genes

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