Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 6.6e-82 307.4 161 100.0
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 3.9e-74 281.6 165 92.1
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 4.3e-49 198.4 161 70.2
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.1e-27 126.3 164 48.8
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 8.2e-24 114.4 165 44.2
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.2e-22 110.5 160 41.9
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.1e-20 104.0 143 48.3
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.2e-19 100.5 164 42.1
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.1e-17 94.0 171 39.2
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 2.0e-17 93.2 166 41.0
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 5.7e-17 91.7 124 49.2
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.3e-16 90.5 149 42.3
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.2e-16 89.7 167 39.5
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-15 86.7 162 43.2
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.8e-15 86.7 172 41.9
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 2.4e-15 86.3 176 38.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.4e-15 86.3 171 37.4
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 9.1e-15 84.3 154 43.5
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.2e-14 84.0 155 38.7
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.5e-14 83.6 166 39.8
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 3.4e-14 82.4 171 38.0
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.5e-14 82.0 124 41.9
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 5.9e-14 81.6 138 43.5
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 5.9e-14 81.6 92 48.9
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 5.0e-13 78.6 134 45.5
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.5e-13 78.2 84 54.8
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.5e-13 78.2 76 60.5
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.4e-12 77.0 172 36.6
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.5e-12 76.3 81 56.8
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 2.5e-12 76.3 81 56.8
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.2e-12 75.9 83 54.2
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.2e-12 75.5 185 33.5
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.2e-12 75.5 140 40.7
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.2e-12 75.5 108 47.2
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 7.2e-12 74.7 161 33.5
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 9.4e-12 74.3 168 35.1
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.4e-12 74.3 84 53.6
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-11 73.9 101 46.5
Nitab4.5_0000349g0170 Nicotiana tabacum HOM05D016316 ORTHO05D018871 1.2e-11 73.9 163 41.1
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.1e-11 73.2 164 36.6
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-11 72.8 79 50.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 3.6e-11 72.4 170 35.3
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.7e-11 72.0 85 50.6
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 6.1e-11 71.6 117 43.6
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.4e-10 70.5 163 34.4
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.8e-10 70.1 152 39.5
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.8e-10 70.1 84 51.2
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.8e-10 70.1 152 39.5
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.3e-10 69.7 159 35.8
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 2.3e-10 69.7 121 38.0
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 2.3e-10 69.7 121 38.0
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 2.3e-10 69.7 121 38.0
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 2.3e-10 69.7 124 42.7
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 3.0e-10 69.3 109 45.0
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.0e-10 69.3 83 45.8
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.9e-10 68.9 85 50.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 3.9e-10 68.9 81 48.1
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 5.2e-10 68.6 161 34.8
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 6.7e-10 68.2 146 36.3
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 8.8e-10 67.8 78 52.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 8.8e-10 67.8 168 33.9
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.1e-09 67.4 116 39.7
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.5e-09 67.0 82 56.1
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 2.0e-09 66.6 77 51.9
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.0e-09 66.6 84 50.0
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 2.6e-09 66.2 78 51.3
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.6e-09 66.2 74 55.4
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 2.6e-09 66.2 123 43.9
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 4.4e-09 65.5 100 48.0
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 7.4e-09 64.7 62 56.5
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.4e-09 64.7 126 42.9
Nitab4.5_0000349g0250 Nicotiana tabacum HOM05D016316 ORTHO05D018871 7.4e-09 64.7 115 42.6
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 9.7e-09 64.3 163 36.2
PGR004G0898 Punica granatum HOM05D005967 ORTHO05D005174 9.7e-09 64.3 185 36.2
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 1.3e-08 63.9 78 48.7
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 2.2e-08 63.2 88 45.5
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 2.8e-08 62.8 103 43.7
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 2.8e-08 62.8 146 34.9
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 3.7e-08 62.4 78 48.7
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 3.7e-08 62.4 106 38.7
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 6.3e-08 61.6 110 40.0
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 8.2e-08 61.2 159 31.4
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 8.2e-08 61.2 112 40.2
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 8.2e-08 61.2 146 34.9
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 1.1e-07 60.8 63 54.0
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 1.1e-07 60.8 42 69.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.8e-07 60.1 116 39.7
C09p74150 Brassica napus HOM05D010528 ORTHO05D005174 2.4e-07 59.7 74 48.6
BolC9t60147H Brassica oleracea HOM05D010528 ORTHO05D005174 2.4e-07 59.7 74 48.6
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 2.4e-07 59.7 80 48.8
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 3.1e-07 59.3 85 47.1
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 3.1e-07 59.3 82 45.1
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 4.1e-07 58.9 80 41.2
TPR.G23268 Trifolium pratense HOM05D005967 ORTHO05D005174 4.1e-07 58.9 83 44.6
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 5.3e-07 58.5 113 43.4
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 5.3e-07 58.5 113 41.6
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.3e-07 58.5 89 41.6
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 7.0e-07 58.2 155 35.5
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 7.0e-07 58.2 82 48.8
SalBow3G2287 Salvia bowleyana HOM05D005967 ORTHO05D005174 7.0e-07 58.2 133 31.6
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 1.2e-06 57.4 75 46.7
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.2e-06 57.4 61 50.8
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 1.6e-06 57.0 83 47.0
Thhalv10015059m.g Eutrema salsugineum HOM05D010528 ORTHO05D005174 1.6e-06 57.0 78 46.2
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 2.0e-06 56.6 39 64.1
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 2.6e-06 56.2 88 47.7
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 3.5e-06 55.8 59 50.8
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 4.5e-06 55.5 66 50.0
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 4.5e-06 55.5 113 38.1
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 4.5e-06 55.5 138 37.7
SGA_v2.0_scaffold126G33790 Striga asiatica HOM05D005967 ORTHO05D005174 4.5e-06 55.5 87 40.2
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 5.9e-06 55.1 65 49.2
A10p33240 Brassica napus HOM05D010528 ORTHO05D005174 5.9e-06 55.1 103 39.8
BraA10t45352Z Brassica rapa HOM05D010528 ORTHO05D005174 5.9e-06 55.1 103 39.8
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 5.9e-06 55.1 115 38.3
A03p00680 Brassica napus HOM05D010528 ORTHO05D005174 7.7e-06 54.7 76 44.7
A03p00720 Brassica napus HOM05D010528 ORTHO05D005174 7.7e-06 54.7 76 44.7
C03p00950 Brassica napus HOM05D010528 ORTHO05D005174 7.7e-06 54.7 76 44.7
BolC3t12657H Brassica oleracea HOM05D010528 ORTHO05D005174 7.7e-06 54.7 76 44.7
BraA03t09457Z Brassica rapa HOM05D010528 ORTHO05D005174 7.7e-06 54.7 76 44.7
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 7.7e-06 54.7 82 41.5
MELO3C003127.2 Cucumis melo HOM05D023073 ORTHO05D005174 7.7e-06 54.7 88 45.5
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 7.7e-06 54.7 121 39.7
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 7.7e-06 54.7 121 39.7
Gohir.A09G156500 Gossypium hirsutum HOM05D036294 ORTHO05D036268 7.7e-06 54.7 80 42.5


User provided reference genes

Program Settings