Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 1.6e-98 362.8 192 100.0
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 1.1e-48 197.2 157 71.3
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 8.8e-41 171.0 157 63.7
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 7.2e-35 151.4 195 52.8
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 1.6e-34 150.2 152 59.2
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 4.7e-34 148.7 154 57.8
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 2.3e-33 146.4 154 58.4
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 4.0e-33 145.6 157 56.7
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 4.0e-33 145.6 154 59.1
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 5.2e-33 145.2 159 54.1
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 2.6e-32 142.9 154 57.1
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 3.3e-32 142.5 154 53.2
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 3.3e-32 142.5 154 56.5
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.7e-31 140.2 175 50.9
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 3.7e-31 139.0 155 54.8
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 3.7e-31 139.0 154 53.9
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 6.3e-31 138.3 156 54.5
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.1e-30 137.5 159 53.5
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.1e-30 137.5 154 55.2
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.4e-30 137.1 159 53.5
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 2.4e-30 136.3 153 54.9
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 4.1e-30 135.6 156 54.5
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 4.1e-30 135.6 154 55.2
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 7.0e-30 134.8 185 50.8
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 7.0e-30 134.8 156 53.2
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 9.1e-30 134.4 152 52.6
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.6e-29 133.7 148 55.4
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 2.0e-29 133.3 154 52.6
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 2.7e-29 132.9 157 54.1
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 2.7e-29 132.9 151 53.0
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 2.7e-29 132.9 148 54.7
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.7e-29 132.9 148 54.7
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.7e-29 132.9 148 54.7
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.7e-29 132.9 148 55.4
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 4.5e-29 132.1 155 54.8
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 5.9e-29 131.7 148 54.7
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 5.9e-29 131.7 175 50.3
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 5.9e-29 131.7 153 53.6
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 1.0e-28 131.0 160 50.0
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 1.7e-28 130.2 175 49.7
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 2.9e-28 129.4 157 51.0
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 3.8e-28 129.0 153 50.3
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 3.8e-28 129.0 156 49.4
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 6.5e-28 128.3 157 51.0
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 8.5e-28 127.9 155 53.5
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.1e-27 127.5 162 49.4
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.5e-27 127.1 153 53.6
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.5e-27 127.1 157 52.2
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.5e-27 127.1 160 49.4
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.5e-27 127.1 176 50.0
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 1.9e-27 126.7 154 50.6
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 1.9e-27 126.7 151 54.3
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 3.2e-27 125.9 153 53.6
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 4.2e-27 125.6 151 56.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 5.5e-27 125.2 177 46.3
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 5.5e-27 125.2 159 50.9
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 5.5e-27 125.2 153 50.3
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 5.5e-27 125.2 154 50.0
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 7.2e-27 124.8 165 50.3
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 7.2e-27 124.8 158 51.3
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 9.4e-27 124.4 184 47.3
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 2.7e-26 122.9 156 48.1
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 2.7e-26 122.9 151 51.0
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 3.6e-26 122.5 157 50.3
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 4.7e-26 122.1 159 47.2
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 6.1e-26 121.7 158 50.6
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.0e-25 120.9 153 50.3
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.4e-25 120.6 153 52.3
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.4e-25 120.6 175 48.0
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 3.0e-25 119.4 154 49.4
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 4.0e-25 119.0 172 47.7
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 6.8e-25 118.2 151 49.7
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 6.8e-25 118.2 153 49.0
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 6.8e-25 118.2 153 52.3
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 1.2e-24 117.5 150 48.0
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 2.6e-24 116.3 175 43.4
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.4e-24 115.5 148 47.3
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 4.4e-24 115.5 153 48.4
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 7.5e-24 114.8 154 49.4
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 9.8e-24 114.4 173 46.8
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 9.8e-24 114.4 163 45.4
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 1.7e-23 113.6 176 47.7
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 3.7e-23 112.5 148 46.6
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 3.7e-23 112.5 148 46.6
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 3.7e-23 112.5 160 45.6
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 8.3e-23 111.3 171 43.9
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.1e-22 110.9 148 46.6
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.1e-22 110.9 162 46.9
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 1.8e-22 110.2 149 46.3
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.4e-22 109.8 149 46.3
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 9.1e-22 107.8 148 48.6
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.6e-21 107.1 146 47.9
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 2.0e-21 106.7 150 44.7
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 2.0e-21 106.7 150 46.0
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 4.5e-21 105.5 176 42.0
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 5.9e-21 105.1 172 43.0
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 7.7e-21 104.8 150 46.0
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 1.0e-20 104.4 176 42.0
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 2.3e-20 103.2 171 42.7
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 2.9e-20 102.8 149 44.3
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 2.9e-20 102.8 149 44.3
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.8e-20 102.4 176 43.8
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.1e-19 100.9 175 41.1
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 1.9e-19 100.1 175 42.3
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 2.5e-19 99.8 155 41.3
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 7.2e-19 98.2 176 39.8
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 9.5e-19 97.8 173 41.6
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.6e-18 97.1 171 42.1
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 1.6e-18 97.1 146 45.2
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 2.8e-18 96.3 175 41.1
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 4.7e-18 95.5 155 41.3
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 6.1e-18 95.1 175 40.0
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.0e-17 94.4 175 40.0
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 2.3e-17 93.2 134 50.0
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 5.2e-17 92.0 155 43.2
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 8.9e-17 91.3 158 42.4
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 1.5e-16 90.5 175 36.6
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 7.5e-16 88.2 178 38.2
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 8.3e-15 84.7 174 39.7
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 1.8e-14 83.6 132 41.7
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.9e-11 73.6 147 34.7
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 7.3e-11 71.6 96 50.0
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 2.8e-10 69.7 171 31.0
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.8e-10 69.7 169 33.7
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 4.7e-10 68.9 154 33.1
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 4.7e-10 68.9 173 32.9
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 8.0e-10 68.2 143 36.4
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 8.9e-09 64.7 152 37.5
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 8.3e-07 58.2 157 29.3
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 4.1e-06 55.8 150 34.0


User provided reference genes

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