Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 0.0e+00 1729.9 941 100.0
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 7.1e-261 904.4 721 70.0
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 4.4e-170 602.8 695 50.2
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 2.2e-161 573.9 799 43.9
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 8.4e-161 572.0 780 44.9
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 1.3e-158 564.7 794 43.7
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 1.8e-155 554.3 739 45.3
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 4.0e-155 553.1 742 47.7
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 7.1e-152 542.3 780 43.5
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 2.7e-151 540.4 655 50.4
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 1.3e-150 538.1 712 45.9
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 5.1e-150 536.2 714 46.2
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 9.6e-149 531.9 772 43.5
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 5.5e-144 516.2 792 41.0
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 5.1e-142 509.6 591 49.4
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 6.7e-142 509.2 869 38.3
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 1.3e-140 505.0 760 44.3
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 1.1e-133 481.9 759 42.2
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 1.8e-131 474.6 847 44.2
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 1.4e-128 464.9 715 43.9
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 2.4e-123 447.6 678 40.3
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 2.1e-119 434.5 795 39.4
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 8.8e-118 429.1 681 42.1
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 1.5e-117 428.3 681 42.1
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 3.3e-117 427.2 680 42.1
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 5.7e-117 426.4 893 39.3
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 1.7e-116 424.9 736 40.9
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 4.5e-114 416.8 718 44.3
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 5.9e-114 416.4 719 40.2
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 1.0e-113 415.6 688 40.8
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.5e-112 411.8 626 40.7
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 7.2e-112 409.5 755 37.4
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 4.7e-111 406.8 692 39.3
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 1.0e-110 405.6 783 37.4
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 1.4e-110 405.2 656 40.4
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 3.0e-110 404.1 652 40.3
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 5.3e-107 393.3 810 37.0
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 2.0e-106 391.3 834 35.1
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 3.5e-106 390.6 690 38.0
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 8.5e-105 386.0 794 39.7
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 3.2e-104 384.0 772 37.7
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 4.2e-104 383.6 808 35.8
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 2.7e-103 380.9 784 38.9
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 5.2e-102 376.7 764 36.6
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 1.7e-100 371.7 876 35.7
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 6.5e-97 359.8 767 40.0
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 5.5e-96 356.7 685 34.7
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 1.6e-95 355.1 826 36.7
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 6.1e-95 353.2 818 35.9
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 6.8e-94 349.7 781 36.5
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 1.2e-93 349.0 777 39.0
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 2.6e-93 347.8 668 36.4
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 1.7e-92 345.1 835 34.4
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 2.8e-92 344.4 767 33.9
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 4.9e-92 343.6 687 36.4
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 1.4e-91 342.0 773 39.3
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 5.9e-90 336.7 813 36.3
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 7.7e-90 336.3 771 32.8
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 1.0e-89 335.9 771 39.0
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 2.9e-89 334.3 738 36.4
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 3.8e-89 334.0 669 37.4
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 2.5e-88 331.3 668 36.8
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 2.5e-88 331.3 664 38.3
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 9.5e-88 329.3 791 36.0
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 1.6e-87 328.6 672 34.8
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 2.1e-87 328.2 816 35.2
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 3.6e-87 327.4 797 36.0
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 3.6e-87 327.4 577 36.6
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 6.1e-87 326.6 735 40.4
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 6.8e-86 323.2 782 33.9
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 2.0e-85 321.6 947 31.2
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 2.0e-85 321.6 663 35.4
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 5.7e-85 320.1 849 32.2
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 2.4e-83 314.7 668 35.3
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 9.2e-83 312.8 798 34.0
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 9.2e-83 312.8 647 36.3
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 9.2e-83 312.8 730 37.0
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 2.0e-82 311.6 747 31.7
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 2.7e-82 311.2 719 34.5
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 2.7e-82 311.2 649 34.2
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 2.7e-82 311.2 726 37.2
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 7.8e-82 309.7 655 33.6
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 1.7e-81 308.5 696 34.8
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 6.6e-81 306.6 678 36.0
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 6.6e-81 306.6 799 34.5
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 1.1e-80 305.8 674 35.9
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 1.5e-80 305.4 746 32.0
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 1.5e-80 305.4 674 35.9
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 1.5e-80 305.4 764 33.8
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 1.9e-80 305.1 674 35.9
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 5.6e-80 303.5 702 35.0
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 1.2e-79 302.4 761 31.8
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.8e-78 298.5 714 30.7
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 4.0e-78 297.4 737 32.0
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 8.9e-78 296.2 654 33.9
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 8.9e-78 296.2 815 34.4
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 2.0e-77 295.0 693 36.7
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 7.5e-77 293.1 644 36.5
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 7.5e-77 293.1 810 34.4
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 2.2e-76 291.6 870 32.5
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 6.4e-76 290.0 641 33.1
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 1.0e-73 282.7 735 36.1
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 1.7e-73 282.0 678 34.2
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 3.6e-71 274.2 632 31.6
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 1.8e-70 271.9 688 30.1
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 1.7e-68 265.4 753 29.6
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 7.8e-66 256.5 519 35.8
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 4.7e-63 247.3 887 26.7
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 1.5e-61 242.3 784 26.7
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 8.9e-54 216.5 364 40.1
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 1.2e-53 216.1 759 30.7
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 5.8e-53 213.8 735 27.3
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 5.8e-53 213.8 656 29.4
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 1.4e-51 209.1 725 27.3
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 1.6e-50 205.7 548 35.4
MELO3C019743.2 Cucumis melo HOM05D005245 ORTHO05D006388 5.6e-48 197.2 425 34.8
COL.COLO4_10076 Corchorus olitorius HOM05D005245 ORTHO05D006388 2.8e-47 194.9 304 41.8
SGA_v2.0_scaffold51G18646 Striga asiatica HOM05D005245 ORTHO05D006388 5.3e-46 190.7 491 32.2
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 2.2e-44 185.3 184 52.2
COL.COLO4_23697 Corchorus olitorius HOM05D005245 ORTHO05D006388 1.4e-43 182.6 255 41.6
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 1.9e-43 182.2 630 28.3
CsaV3_3G019350 Cucumis sativus L. HOM05D005245 ORTHO05D006388 8.7e-41 173.3 274 40.5
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 2.4e-38 165.2 166 49.4
Atru.chr3.860 Acer truncatum HOM05D005245 ORTHO05D006388 1.5e-32 146.0 261 38.7
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 1.6e-31 142.5 239 38.1
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 4.8e-31 141.0 189 42.9
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 8.1e-31 140.2 187 46.0
Sabra13G0101200 Salix brachista HOM05D005245 ORTHO05D006388 5.1e-25 120.9 134 50.0
Oeu032898.1 Olea europaea HOM05D000225 ORTHO05D001817 1.1e-24 119.8 57 96.5
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 1.1e-24 119.8 177 40.1
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 4.3e-24 117.9 121 50.4
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 2.2e-20 105.5 187 35.3
unitig_62.g23335 Utricularia gibba HOM05D005245 ORTHO05D006388 8.4e-20 103.6 129 42.6
Os06g0538200 Oryza sativa ssp. japonica HOM05D005245 ORTHO05D006388 1.0e-12 80.1 219 29.2
Zm00001eb238760 Zea mays HOM05D005245 ORTHO05D006388 5.0e-12 77.8 178 32.6
Zm00001eb204940 Zea mays HOM05D005245 ORTHO05D006388 1.1e-11 76.6 205 27.8
RcHm_v2.0_Chr4g0423021 Rosa chinensis HOM05D005245 ORTHO05D006388 1.4e-11 76.3 75 54.7
Zm00001eb238770 Zea mays HOM05D005245 ORTHO05D006388 7.2e-11 73.9 386 24.6
CAN.G97.26 Capsicum annuum HOM05D000252 ORTHO05D006388 3.6e-10 71.6 59 55.9
Oeu036027.1 Olea europaea HOM05D054942 ORTHO05D292574 6.1e-10 70.9 54 70.4
Oeu007143.1 Olea europaea HOM05D054942 ORTHO05D289995 5.3e-06 57.8 39 74.4


User provided reference genes

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