Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 0.0e+00 1290.8 881 100.0
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 4.5e-249 865.1 852 74.4
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 2.1e-238 829.7 852 75.8
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 6.1e-238 828.2 881 69.6
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 6.3e-235 818.1 852 74.8
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 6.3e-235 818.1 851 72.5
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 8.2e-235 817.8 851 72.5
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 1.8e-234 816.6 851 76.4
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 4.5e-233 812.0 849 74.1
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 1.5e-231 807.0 850 74.7
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 1.5e-231 807.0 851 73.4
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 4.7e-230 802.0 843 72.7
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 1.1e-228 797.3 882 70.9
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 1.5e-228 797.0 812 75.7
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 2.8e-227 792.7 854 74.6
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 6.3e-227 791.6 801 71.2
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 1.8e-226 790.0 851 72.6
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 5.3e-226 788.5 834 72.2
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 9.1e-226 787.7 847 74.5
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 1.2e-225 787.3 847 75.1
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 5.5e-223 778.5 835 70.3
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 1.0e-221 774.2 822 73.8
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 2.3e-221 773.1 833 74.7
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 5.7e-220 768.5 866 71.5
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 1.3e-219 767.3 862 73.5
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 1.4e-218 763.8 834 74.5
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 1.4e-218 763.8 838 70.4
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 1.8e-218 763.5 847 74.6
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 1.3e-216 757.3 833 70.7
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 2.2e-216 756.5 830 76.1
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 5.0e-216 755.4 827 74.8
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 8.5e-216 754.6 875 72.1
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 5.5e-215 751.9 875 72.0
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 9.4e-215 751.1 838 72.3
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 2.7e-214 749.6 836 72.8
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.3e-211 740.7 886 61.4
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 2.2e-211 740.0 875 71.9
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.2e-211 740.0 834 70.6
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 8.3e-211 738.0 804 74.4
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 1.1e-210 737.6 858 71.3
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 1.6e-209 733.8 814 71.9
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 2.7e-209 733.0 815 73.4
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 4.5e-209 732.3 855 68.8
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 5.9e-209 731.9 821 73.7
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 1.0e-208 731.1 840 70.4
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.0e-208 731.1 843 73.8
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.0e-208 731.1 843 73.8
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 2.9e-208 729.6 862 70.0
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 8.6e-208 728.0 872 64.6
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 2.8e-206 723.0 813 72.2
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 8.0e-206 721.5 843 72.8
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 8.0e-206 721.5 847 69.3
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 1.0e-205 721.1 817 72.7
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 6.8e-205 718.4 821 72.8
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 6.8e-205 718.4 811 67.0
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 6.8e-205 718.4 813 73.1
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 1.5e-204 717.2 831 72.1
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 2.0e-204 716.8 838 73.9
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 1.3e-203 714.1 823 70.1
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 2.2e-203 713.4 826 73.0
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 2.2e-203 713.4 839 71.3
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 1.8e-202 710.3 837 72.4
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 1.8e-202 710.3 826 72.0
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 3.2e-202 709.5 837 71.6
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 9.2e-202 708.0 831 69.4
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 1.2e-201 707.6 813 72.4
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 1.6e-201 707.2 899 65.7
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 2.0e-201 706.8 871 66.2
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 5.0e-200 702.2 830 67.2
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.5e-199 700.7 846 69.3
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 5.6e-199 698.7 848 68.5
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 1.6e-198 697.2 832 68.1
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 2.8e-198 696.4 827 68.3
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 2.8e-198 696.4 801 68.2
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 2.3e-197 693.3 822 72.0
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.1e-197 693.0 814 72.4
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 7.5e-196 688.3 880 66.2
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 7.5e-196 688.3 816 71.3
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 9.8e-196 688.0 828 69.1
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.7e-195 687.2 841 69.7
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 1.4e-194 684.1 820 70.0
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 3.2e-194 682.9 812 72.0
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 5.4e-194 682.2 828 68.8
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 1.5e-191 674.1 821 68.6
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 2.5e-191 673.3 818 69.3
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 5.6e-191 672.2 831 69.3
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 9.5e-191 671.4 830 66.6
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 1.2e-190 671.0 828 68.0
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 1.2e-190 671.0 819 68.7
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 4.0e-189 666.0 815 67.4
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 3.4e-188 662.9 804 70.9
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 5.8e-188 662.1 806 62.5
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 2.2e-187 660.2 817 61.9
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 1.4e-186 657.5 801 68.9
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 3.2e-186 656.4 716 76.0
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 4.1e-186 656.0 790 70.4
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 3.0e-184 649.8 833 67.0
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 3.0e-184 649.8 806 65.5
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 3.9e-184 649.4 810 66.9
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 8.6e-184 648.3 833 69.1
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 1.1e-183 647.9 787 71.5
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 7.3e-183 645.2 818 65.6
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 2.1e-182 643.7 842 66.5
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 2.0e-180 637.1 815 67.2
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 2.6e-180 636.7 803 63.6
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 2.6e-180 636.7 809 67.7
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 1.3e-179 634.4 804 65.4
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 1.3e-179 634.4 806 64.3
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 1.3e-179 634.4 806 64.3
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 2.4e-178 630.2 809 67.1
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 2.4e-178 630.2 805 67.7
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 2.4e-178 630.2 809 67.1
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.4e-178 630.2 793 69.1
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 3.2e-178 629.8 822 66.2
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 9.2e-178 628.2 809 66.9
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 9.2e-178 628.2 809 66.9
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 4.6e-177 625.9 817 60.8
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 6.0e-177 625.5 806 66.9
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 1.7e-176 624.0 815 66.6
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 1.9e-175 620.5 815 65.8
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 1.8e-173 614.0 856 65.3
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 2.4e-173 613.6 807 66.2
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 8.9e-173 611.7 815 66.1
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 3.4e-172 609.8 807 62.0
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 7.1e-170 602.1 832 60.2
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 1.1e-167 594.7 806 62.9
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 6.2e-166 589.0 845 63.1
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 1.2e-164 584.7 806 62.9
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 1.3e-163 581.3 853 45.5
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 1.6e-161 574.3 804 60.4
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 1.5e-159 567.8 804 60.1
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 2.1e-158 563.9 793 62.5
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 1.8e-157 560.8 806 61.3
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 1.8e-157 560.8 813 55.8
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 5.3e-157 559.3 752 61.0
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 2.0e-156 557.4 765 59.2
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 7.6e-156 555.4 741 65.0
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 4.9e-155 552.7 787 51.6
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.3e-152 544.7 820 62.7
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 9.6e-151 538.5 640 75.9
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.0e-148 530.8 684 66.8
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 5.5e-146 522.7 839 58.6
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 1.3e-144 518.1 687 70.0
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 8.7e-144 515.4 656 70.0
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 8.7e-136 488.8 926 49.9
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.5e-135 488.0 940 51.1
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 2.3e-128 464.2 651 73.0
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 1.5e-119 434.9 800 52.1
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 7.0e-117 426.0 649 71.6
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 5.9e-116 422.9 590 64.1
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.7e-115 421.4 837 43.4
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.4e-112 411.8 930 42.9
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 6.7e-112 409.5 860 52.4
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 4.5e-108 396.7 477 68.1
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 8.5e-99 365.9 312 73.7
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 2.5e-98 364.4 651 59.1
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 1.2e-92 345.5 472 50.6
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 5.9e-92 343.2 746 50.1
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-89 335.1 1317 29.5
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 4.7e-89 333.6 931 45.1
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 4.9e-86 323.6 434 51.8
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 1.0e-75 289.3 271 65.3
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 6.6e-75 286.6 299 82.6
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 3.6e-73 280.8 634 55.4
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 1.1e-56 226.1 143 81.1
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 7.1e-53 213.4 225 53.3
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 6.7e-43 180.3 188 51.1
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 5.8e-31 140.6 88 80.7
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.0e-30 139.8 106 62.3
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 9.3e-29 133.3 78 82.1
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 1.3e-25 122.9 119 58.0
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 4.2e-21 107.8 74 67.6
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 3.6e-20 104.8 66 81.8
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 5.1e-19 100.9 192 37.5
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 9.4e-13 80.1 136 71.3
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 3.6e-12 78.2 61 59.0


User provided reference genes

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