Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036040.1 Olea europaea HOM05D003422 ORTHO05D004263 1.3e-29 132.5 70 100.0
Atru.chr2.1587 Acer truncatum HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Atru.chr3.1581 Acer truncatum HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Cfa009213 Carpinus fangiana HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Cfa012129 Carpinus fangiana HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Ciclev10032237m.g Citrus clementina HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Cc11_g15770 Coffea canephora HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Haze_08919 Corylus avellana HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Haze_12250 Corylus avellana HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Migut.E00204 Erythranthe guttata HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Oeu041425.1 Olea europaea HOM05D003422 ORTHO05D004263 1.0e-15 86.3 130 43.1
Dinv15231 Davidia involucrata HOM05D003422 ORTHO05D004263 1.8e-15 85.5 130 43.1
Lalb_Chr04g0254851 Lupinus albus HOM05D003422 ORTHO05D004263 1.8e-15 85.5 130 43.1
Lalb_Chr10g0099861 Lupinus albus HOM05D003422 ORTHO05D004263 1.8e-15 85.5 130 43.1
unitig_21.g20608 Utricularia gibba HOM05D003422 ORTHO05D004263 1.8e-15 85.5 130 43.1
FvH4_4g25580 Fragaria vesca HOM05D003422 ORTHO05D004263 2.3e-15 85.1 130 42.3
Actinidia27808 Actinidia chinensis HOM05D003422 ORTHO05D004263 3.0e-15 84.7 118 46.6
MELO3C017744.2 Cucumis melo HOM05D003422 ORTHO05D004263 3.0e-15 84.7 130 42.3
CsaV3_4G003000 Cucumis sativus L. HOM05D003422 ORTHO05D004263 3.0e-15 84.7 130 42.3
PSO017G4826 Papaver somniferum HOM05D003422 ORTHO05D004263 3.0e-15 84.7 130 42.3
PSO478G1628 Papaver somniferum HOM05D003422 ORTHO05D004263 3.0e-15 84.7 130 42.3
Sed0010066 Sechium edule HOM05D003422 ORTHO05D004263 3.0e-15 84.7 130 42.3
Sed0026406 Sechium edule HOM05D003422 ORTHO05D004263 3.0e-15 84.7 130 42.3
ClCG07G015410 Citrullus lanatus HOM05D003422 ORTHO05D004263 3.9e-15 84.3 130 42.3
Rhsim02G0001300 Rhododendron simsii HOM05D003422 ORTHO05D004263 3.9e-15 84.3 131 42.0
Rhsim06G0078600 Rhododendron simsii HOM05D003422 ORTHO05D004263 3.9e-15 84.3 131 42.0
TPR.G28314 Trifolium pratense HOM05D003422 ORTHO05D004263 3.9e-15 84.3 130 41.5
CSS0036067 Camellia sinensis var. sinensis HOM05D003422 ORTHO05D004263 5.2e-15 84.0 130 42.3
Nn2g13933 Nelumbo nucifera HOM05D003422 ORTHO05D004263 5.2e-15 84.0 130 42.3
Nn8g40815 Nelumbo nucifera HOM05D003422 ORTHO05D004263 5.2e-15 84.0 130 42.3
Sabra15G0107000 Salix brachista HOM05D003422 ORTHO05D004263 5.2e-15 84.0 130 42.3
Hma1.2p1_3343F.1_g335440 Hydrangea macrophylla HOM05D003422 ORTHO05D004263 6.7e-15 83.6 130 42.3
arahy.Tifrunner.gnm1.ann1.G4VR7T Arachis hypogaea HOM05D003422 ORTHO05D004263 8.8e-15 83.2 130 41.5
arahy.Tifrunner.gnm1.ann1.I3QT17 Arachis hypogaea HOM05D003422 ORTHO05D004263 8.8e-15 83.2 130 41.5
Sc14g0008740 Simmondsia chinensis HOM05D003422 ORTHO05D004263 8.8e-15 83.2 130 41.5
TWI39G0719 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 8.8e-15 83.2 130 41.5
CiPaw.05G159400 Carya illinoinensis HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
CiPaw.05G181800 Carya illinoinensis HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
Eucgr.B00992 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
FAN07G0682 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
FAN17G2514 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
RcHm_v2.0_Chr4g0433011 Rosa chinensis HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
RcHm_v2.0_Chr7g0190541 Rosa chinensis HOM05D003422 ORTHO05D004263 1.1e-14 82.8 130 41.5
Actinidia15098 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 41.5
Aqoxy5G03760 Aquilegia oxysepala HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 40.8
Cpa.g.sc33.23 Carica papaya HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 42.3
PSO017G5618 Papaver somniferum HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 41.5
Peaxi162Scf00128g00219 Petunia axillaris HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 41.5
QL03p058012 Quercus lobata HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 41.5
GSVIVG01007655001 Vitis vinifera HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 41.5
GSVIVG01021879001 Vitis vinifera HOM05D003422 ORTHO05D004263 1.5e-14 82.4 130 41.5
CAN.G158.25 Capsicum annuum HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Dinv38208 Davidia involucrata HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Nitab4.5_0001565g0060 Nicotiana tabacum HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Nitab4.5_0009109g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Potri.015G083700 Populus trichocarpa HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
PGR102G0689 Punica granatum HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Sabra12G0061400 Salix brachista HOM05D003422 ORTHO05D004263 2.0e-14 82.0 131 41.2
Solyc01g005810.3 Solanum lycopersicum HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Sopen01g001810 Solanum pennellii HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
PGSC0003DMG400032131 Solanum tuberosum HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
TWI23G0208 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 40.8
TAR622G0502 Trochodendron aralioides HOM05D003422 ORTHO05D004263 2.0e-14 82.0 130 41.5
Glyma.12G119800 Glycine max HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 40.8
MD03G1198200 Malus domestica HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 40.8
MD11G1214400 Malus domestica HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 40.8
Medtr2g103560 Medicago truncatula HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 41.5
Nn8g39875 Nelumbo nucifera HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 41.5
Phvul.010G035100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 40.8
Phvul.011G000100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 2.6e-14 81.6 130 40.8
Rhsim12G0110100 Rhododendron simsii HOM05D003422 ORTHO05D004263 2.6e-14 81.6 131 41.2
FAN06G1621 Fragaria x ananassa HOM05D003422 ORTHO05D004263 3.3e-14 81.3 130 40.8
FAN22G1899 Fragaria x ananassa HOM05D003422 ORTHO05D004263 3.3e-14 81.3 130 40.8
Psat7g167080 Pisum sativum HOM05D003422 ORTHO05D004263 3.3e-14 81.3 130 40.8
CANSAT64G0467 Cannabis sativa HOM05D003422 ORTHO05D004263 4.4e-14 80.9 130 40.8
Eucgr.K01009 Eucalyptus grandis HOM05D003422 ORTHO05D004263 4.4e-14 80.9 130 40.8
THA.LOC104822989 Tarenaya hassleriana HOM05D003422 ORTHO05D004263 4.4e-14 80.9 130 41.5
TAR374G1409 Trochodendron aralioides HOM05D003422 ORTHO05D004263 4.4e-14 80.9 133 40.6
Glyma.06G286100 Glycine max HOM05D003422 ORTHO05D004263 5.7e-14 80.5 130 40.0
VMungo1127G0899 Vigna mungo HOM05D003422 ORTHO05D004263 5.7e-14 80.5 130 40.0
Duzib068G0444 Durio zibethinus HOM05D003422 ORTHO05D004263 7.4e-14 80.1 130 40.8
Potri.012G085300 Populus trichocarpa HOM05D003422 ORTHO05D004263 7.4e-14 80.1 130 40.8
Prupe.1G244800 Prunus persica HOM05D003422 ORTHO05D004263 7.4e-14 80.1 130 40.8
Prupe.8G016700 Prunus persica HOM05D003422 ORTHO05D004263 7.4e-14 80.1 130 40.8
Thecc.03G025100 Theobroma cacao HOM05D003422 ORTHO05D004263 7.4e-14 80.1 130 40.8
COL.COLO4_05559 Corchorus olitorius HOM05D003422 ORTHO05D004263 9.7e-14 79.7 130 40.8
Gohir.A12G199400 Gossypium hirsutum HOM05D003422 ORTHO05D004263 9.7e-14 79.7 130 40.8
Gohir.D12G202200 Gossypium hirsutum HOM05D003422 ORTHO05D004263 9.7e-14 79.7 130 40.8
Gorai.008G217200 Gossypium raimondii HOM05D003422 ORTHO05D004263 9.7e-14 79.7 130 40.8
Nitab4.5_0016963g0010 Nicotiana tabacum HOM05D003422 ORTHO05D004263 1.3e-13 79.3 130 40.0
QL03p061510 Quercus lobata HOM05D003422 ORTHO05D004263 1.3e-13 79.3 130 40.8
Aa31LG7G7310 Aethionema arabicum HOM05D003422 ORTHO05D004263 1.7e-13 79.0 130 40.0
AL1G31870 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 1.7e-13 79.0 130 40.0
AT1G23280 Arabidopsis thaliana HOM05D003422 ORTHO05D004263 1.7e-13 79.0 130 40.0
Carub.0001s2287 Capsella rubella HOM05D003422 ORTHO05D004263 1.7e-13 79.0 130 40.0
Thhalv10008312m.g Eutrema salsugineum HOM05D003422 ORTHO05D004263 1.7e-13 79.0 130 40.0
Manes.13G024200 Manihot esculenta HOM05D003422 ORTHO05D004263 1.7e-13 79.0 130 40.8
BcaB03g15550 Brassica carinata HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
BcaB05g24600 Brassica carinata HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
BcaC03g15214 Brassica carinata HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
BcaC08g45809 Brassica carinata HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
A07p31020 Brassica napus HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
C02p28010 Brassica napus HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
C06p36020 Brassica napus HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
BolC2t08844H Brassica oleracea HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
BolC6t38723H Brassica oleracea HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
Sp5g25830 Schrenkiella parvula HOM05D003422 ORTHO05D004263 2.2e-13 78.6 130 40.0
Hund06028 Selenicereus undatus HOM05D003422 ORTHO05D004263 3.7e-13 77.8 130 40.0
TPR.G37166 Trifolium pratense HOM05D003422 ORTHO05D004263 3.7e-13 77.8 130 40.0
BraA02t06729Z Brassica rapa HOM05D003422 ORTHO05D004263 6.3e-13 77.0 130 39.2
CARHR023720 Cardamine hirsuta HOM05D003422 ORTHO05D004263 8.2e-13 76.6 130 39.2
Ca_20120_v3 Cicer arietinum L. HOM05D003422 ORTHO05D004263 8.2e-13 76.6 130 38.5
DCAR_026512 Daucus carota HOM05D003422 ORTHO05D004263 8.2e-13 76.6 130 38.5
A02p16750 Brassica napus HOM05D003422 ORTHO05D004263 1.1e-12 76.3 130 39.2
Lj1g0018398 Lotus japonicus HOM05D003422 ORTHO05D004263 1.4e-12 75.9 130 39.2
BraA03t13450Z Brassica rapa HOM05D003422 ORTHO05D004263 9.1e-12 73.2 130 37.7
ECA233G3049 Erigeron canadensis HOM05D003422 ORTHO05D004263 9.1e-12 73.2 130 37.7
HanXRQChr06g0172831 Helianthus annuus HOM05D003422 ORTHO05D004263 9.1e-12 73.2 130 37.7
Lsat_1_v5_gn_8_152261 Lactuca sativa HOM05D003422 ORTHO05D004263 9.1e-12 73.2 130 37.7
BcaC01g03409 Brassica carinata HOM05D003422 ORTHO05D004263 1.6e-11 72.4 130 37.7
C03p52870 Brassica napus HOM05D003422 ORTHO05D004263 1.6e-11 72.4 130 37.7
BolC3t17554H Brassica oleracea HOM05D003422 ORTHO05D004263 1.6e-11 72.4 130 37.7
AL1G37060 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 2.0e-11 72.0 130 36.9
Lsat_1_v5_gn_5_166341 Lactuca sativa HOM05D003422 ORTHO05D004263 1.1e-09 66.2 129 35.7
Eucgr.B00881 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.9e-09 65.5 34 94.1
SEGI_07600 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 2.5e-09 65.1 130 35.4
arahy.Tifrunner.gnm1.ann1.FFB06F Arachis hypogaea HOM05D003422 ORTHO05D004263 4.2e-09 64.3 33 93.9
Os07g0270900 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 5.5e-09 63.9 127 35.4
CDE05G1364 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 7.2e-09 63.5 128 35.9
Atru.chr3.1559 Acer truncatum HOM05D003422 ORTHO05D004263 9.4e-09 63.2 33 93.9
ATR0824G091 Amborella trichopoda HOM05D003422 ORTHO05D004263 9.4e-09 63.2 130 36.2
Eucgr.K00985 Eucalyptus grandis HOM05D003422 ORTHO05D004263 9.4e-09 63.2 33 93.9
Lj1A759T42 Lonicera japonica HOM05D003422 ORTHO05D004263 9.4e-09 63.2 33 93.9
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 9.4e-09 63.2 33 93.9
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 9.4e-09 63.2 33 93.9
HPP92_014432 Vanilla planifolia HOM05D003422 ORTHO05D004263 9.4e-09 63.2 130 33.8
Nitab4.5_0000979g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 1.2e-08 62.8 154 33.1
Zm00001eb364260 Zea mays HOM05D003422 ORTHO05D004263 1.6e-08 62.4 127 33.9
Prupe.8G011700 Prunus persica HOM05D003422 ORTHO05D004263 2.7e-08 61.6 33 90.9
SEGI_01875 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 6.1e-08 60.5 131 33.6
AUR62003555 Chenopodium quinoa HOM05D003422 ORTHO05D004263 1.0e-07 59.7 27 88.9
AUR62017869 Chenopodium quinoa HOM05D003422 ORTHO05D004263 1.0e-07 59.7 27 88.9
Ah.04g165080 Amaranthus hybridus HOM05D002611 ORTHO05D002822 1.4e-07 59.3 33 87.9
FAN06G3710 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.4e-07 59.3 27 88.9
SpUn0343_0020 Schrenkiella parvula HOM05D003422 ORTHO05D004263 1.4e-07 59.3 33 87.9
FvH4_7g31100 Fragaria vesca HOM05D003422 ORTHO05D004263 1.8e-07 58.9 27 85.2
EL10Ac6g13812 Beta vulgaris HOM05D003422 ORTHO05D004263 2.3e-07 58.5 27 88.9
A03p43080 Brassica napus HOM05D003422 ORTHO05D004263 2.3e-07 58.5 157 31.2
CBR_g32274 Chara braunii HOM05D003422 ORTHO05D004263 4.0e-07 57.8 130 32.3
Eucgr.K00976 Eucalyptus grandis HOM05D003422 ORTHO05D004263 6.7e-07 57.0 27 85.2
Mapoly0061s0104 Marchantia polymorpha HOM05D003422 ORTHO05D004263 6.7e-07 57.0 130 33.1
Medtr4g079190 Medicago truncatula HOM05D003422 ORTHO05D004263 6.7e-07 57.0 27 85.2
Pp3c2_4220 Physcomitrium patens HOM05D003422 ORTHO05D004263 6.7e-07 57.0 130 33.1
CDE02G2608 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 8.8e-07 56.6 33 84.8
vmacro17129 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 2.0e-06 55.5 27 85.2
BcaC09g49229 Brassica carinata HOM05D003422 ORTHO05D004263 5.7e-06 53.9 130 30.8
A01p32170 Brassica napus HOM05D003422 ORTHO05D004263 7.5e-06 53.5 130 30.8
PRCOL_00004566 Prasinoderma coloniale HOM05D003422 ORTHO05D004263 7.5e-06 53.5 128 32.8
vmacro16194 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 9.7e-06 53.1 27 81.5


User provided reference genes

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