Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 0.0e+00 1125.9 578 100.0
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 9.5e-232 807.0 578 70.4
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.6e-218 763.1 584 69.0
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.5e-218 761.9 597 68.2
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 1.1e-216 756.9 596 66.9
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.1e-214 750.4 617 64.2
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 2.6e-213 745.7 597 64.3
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 1.9e-211 739.6 618 62.9
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 7.8e-210 734.2 608 62.5
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 1.9e-208 729.6 575 64.7
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 9.0e-206 720.7 624 59.6
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 2.6e-205 719.2 614 61.7
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 9.9e-205 717.2 603 63.0
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 2.1e-202 709.5 615 60.3
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 6.7e-201 704.5 626 59.1
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 5.6e-200 701.4 594 61.1
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 4.8e-199 698.4 595 62.0
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 2.4e-198 696.0 597 62.0
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 2.9e-196 689.1 598 60.9
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 3.8e-196 688.7 594 61.6
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 6.0e-194 681.4 627 57.9
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 1.8e-193 679.9 536 65.7
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 5.1e-193 678.3 628 57.6
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 6.7e-193 677.9 633 58.1
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 1.5e-192 676.8 609 59.4
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 2.5e-192 676.0 597 61.0
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 4.3e-192 675.2 618 60.0
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 4.0e-190 668.7 568 62.7
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.9e-190 667.9 595 61.3
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-189 667.2 595 61.0
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.5e-189 666.8 595 61.0
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 2.0e-189 666.4 597 59.0
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 2.9e-188 662.5 578 59.9
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 1.4e-187 660.2 598 57.5
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.9e-187 659.8 509 67.2
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 4.2e-187 658.7 589 58.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 9.3e-187 657.5 609 57.3
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.2e-186 657.1 611 58.8
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 1.6e-186 656.8 616 58.3
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.6e-186 655.2 599 60.1
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 4.6e-186 655.2 600 59.5
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 7.9e-186 654.4 614 58.6
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.9e-186 654.4 596 60.2
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 1.0e-185 654.1 615 58.4
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 1.8e-185 653.3 607 59.1
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 2.3e-185 652.9 591 58.0
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 3.9e-185 652.1 594 59.4
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 8.7e-185 651.0 588 58.5
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 9.6e-184 647.5 578 58.1
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 1.4e-182 643.7 574 57.8
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 5.3e-182 641.7 560 60.2
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 5.3e-182 641.7 516 63.8
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 1.5e-181 640.2 493 68.0
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 2.6e-181 639.4 621 58.5
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 4.5e-181 638.6 595 58.5
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 6.5e-180 634.8 598 59.0
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 5.5e-179 631.7 590 56.6
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 9.3e-179 630.9 472 70.1
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 2.1e-178 629.8 589 56.9
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 4.6e-178 628.6 590 56.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 4.6e-178 628.6 590 56.6
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 6.1e-178 628.2 617 56.9
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 7.9e-178 627.9 590 56.4
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 1.0e-177 627.5 597 57.1
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.3e-177 627.1 503 64.2
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 3.9e-177 625.5 590 56.4
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 2.5e-176 622.9 597 56.1
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 2.5e-176 622.9 608 56.7
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 3.3e-176 622.5 624 55.8
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 2.2e-175 619.8 599 58.6
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 4.8e-175 618.6 568 57.4
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 6.3e-175 618.2 431 75.9
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 5.0e-172 608.6 600 55.8
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 1.1e-171 607.4 555 58.0
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.2e-170 604.0 595 56.0
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 6.1e-170 601.7 601 55.4
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 3.0e-169 599.4 591 54.3
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 1.5e-168 597.0 598 54.8
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 3.3e-168 595.9 552 57.6
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 2.8e-167 592.8 584 55.8
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.5e-165 587.0 617 54.0
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 2.0e-165 586.6 505 59.8
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 4.5e-165 585.5 659 49.9
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 1.7e-159 567.0 609 51.9
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.6e-157 559.7 609 53.5
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 2.6e-157 559.7 505 62.4
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 3.2e-155 552.7 476 63.4
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 2.1e-154 550.1 457 59.1
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 5.2e-153 545.4 471 57.7
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.3e-151 540.8 485 60.8
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 6.5e-148 528.5 608 51.5
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 8.5e-148 528.1 466 59.7
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 1.0e-145 521.2 597 50.4
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 2.6e-144 516.5 566 48.6
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 3.1e-134 483.0 450 57.6
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 1.2e-130 471.1 434 56.7
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 2.3e-129 466.8 316 73.7
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 5.4e-126 455.7 547 44.1
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 9.2e-126 454.9 636 41.7
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 2.5e-123 446.8 349 64.8
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 7.3e-115 418.7 592 41.2
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 2.9e-111 406.8 593 43.8
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 1.9e-107 394.0 371 57.1
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 9.0e-97 358.6 286 65.0
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 9.9e-96 355.1 331 58.9
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 4.2e-94 349.7 459 43.1
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 4.3e-91 339.7 175 96.0
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 2.8e-90 337.0 398 45.0
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 4.6e-85 319.7 242 68.6
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 2.1e-77 294.3 289 55.7
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 5.3e-65 253.1 332 43.1
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 3.0e-60 237.3 211 55.5
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 6.7e-60 236.1 181 63.0
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 5.7e-59 233.0 214 57.9
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 1.0e-55 222.2 390 35.1
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 1.1e-54 218.8 273 45.1
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 2.7e-53 214.2 243 55.1
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 5.1e-52 209.9 155 63.2
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-49 201.4 159 64.2
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-49 201.4 159 64.2
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-49 201.4 159 64.2
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-49 201.4 159 64.2
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.0e-44 185.7 163 54.6
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 7.4e-43 179.5 244 44.7
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 1.6e-32 145.2 212 37.7
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 5.9e-32 143.3 528 26.9
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 3.8e-31 140.6 142 48.6
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 8.5e-31 139.4 158 44.3
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 1.0e-28 132.5 90 70.0
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 3.0e-28 131.0 364 27.2
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 5.2e-28 130.2 116 52.6
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 3.4e-27 127.5 131 58.8
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-21 106.7 157 42.0
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 1.4e-20 105.5 118 61.0
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 1.4e-17 95.5 119 47.9
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 3.1e-17 94.4 172 32.6
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 7.0e-17 93.2 45 91.1
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 2.7e-16 91.3 118 42.4
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 2.7e-16 91.3 75 73.3
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-12 78.6 131 33.6
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 6.4e-10 70.1 72 43.1
MBI04_g15062_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 1.5e-06 58.9 114 38.6


User provided reference genes

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