Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 2.2e-128 462.2 225 100.0
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.7e-113 412.1 259 80.3
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.9e-103 379.4 225 84.0
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 2.6e-100 369.0 228 79.8
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 4.4e-100 368.2 227 81.1
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 4.4e-100 368.2 222 79.7
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 4.4e-100 368.2 222 79.7
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 2.9e-99 365.5 224 80.4
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 8.3e-99 364.0 228 77.2
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.6e-97 359.8 227 78.4
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.6e-97 359.8 222 79.3
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.6e-97 359.8 224 79.0
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.0e-96 357.1 227 78.0
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 2.3e-96 355.9 226 77.4
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.3e-96 355.9 226 78.3
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 2.9e-96 355.5 227 78.0
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.9e-96 355.1 226 77.9
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.9e-96 355.1 222 77.0
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 3.9e-96 355.1 227 78.0
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 3.9e-96 355.1 225 77.3
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 5.0e-96 354.8 225 78.2
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 6.6e-96 354.4 226 78.3
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 6.6e-96 354.4 226 78.3
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.6e-96 354.4 227 77.5
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 6.6e-96 354.4 226 76.5
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 6.6e-96 354.4 227 76.7
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 8.6e-96 354.0 222 77.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.5e-95 353.2 226 75.2
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 1.9e-95 352.8 226 77.4
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.9e-95 352.8 226 77.4
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 3.3e-95 352.1 222 78.8
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 3.3e-95 352.1 225 77.8
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.3e-95 352.1 226 77.0
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 4.3e-95 351.7 227 77.1
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.6e-94 349.7 246 72.0
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.6e-94 349.7 228 75.4
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 2.8e-94 349.0 233 73.8
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 3.6e-94 348.6 227 75.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 3.6e-94 348.6 228 75.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 3.6e-94 348.6 225 74.7
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 4.7e-94 348.2 225 75.1
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 6.2e-94 347.8 222 76.6
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.0e-93 347.1 227 74.9
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.0e-93 347.1 225 75.6
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.0e-93 347.1 224 75.4
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.0e-93 347.1 225 74.7
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.0e-93 345.1 223 77.1
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 5.2e-93 344.7 225 73.3
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 6.8e-93 344.4 226 73.9
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.2e-92 343.6 222 76.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.6e-92 342.4 227 73.6
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 7.5e-92 340.9 223 74.4
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 9.8e-92 340.5 225 73.8
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.3e-91 340.1 224 73.7
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.7e-91 339.7 225 75.1
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.7e-91 339.7 224 73.7
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.2e-91 339.3 236 71.6
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 2.2e-91 339.3 206 80.1
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 2.2e-91 339.3 250 70.8
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 2.9e-91 339.0 226 72.1
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 2.9e-91 339.0 224 74.1
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 4.9e-91 338.2 225 73.3
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 4.9e-91 338.2 225 73.3
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 4.9e-91 338.2 225 74.7
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 6.4e-91 337.8 233 70.8
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 6.4e-91 337.8 225 73.3
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 6.4e-91 337.8 225 73.3
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.1e-90 337.0 230 74.3
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 2.4e-90 335.9 225 72.9
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 4.1e-90 335.1 225 72.9
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 2.0e-89 332.8 230 70.9
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 3.5e-89 332.0 229 72.5
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 3.0e-88 328.9 227 72.2
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.9e-87 326.2 207 76.8
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 4.3e-87 325.1 228 71.5
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 7.3e-87 324.3 224 71.4
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 7.3e-87 324.3 228 71.9
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 9.5e-87 323.9 212 74.5
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 9.5e-87 323.9 209 76.6
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.1e-86 322.8 207 74.4
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 2.1e-86 322.8 235 68.5
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 4.7e-86 321.6 222 72.1
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.0e-85 318.5 246 66.7
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.6e-84 315.8 228 71.1
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.1e-82 310.5 207 72.9
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 3.2e-82 308.9 208 72.6
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 2.1e-81 306.2 225 70.2
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.1e-81 306.2 213 72.3
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.0e-80 303.9 234 67.5
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.0e-80 303.9 216 69.4
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 1.2e-76 290.4 225 65.8
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 7.6e-76 287.7 226 65.9
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.2e-75 286.2 240 60.4
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 2.3e-72 276.2 211 70.1
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 3.9e-72 275.4 154 83.8
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 3.9e-72 275.4 173 77.5
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 5.6e-71 271.6 233 62.2
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.8e-69 266.5 228 61.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.8e-69 266.5 175 68.0
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 5.2e-69 265.0 175 69.7
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 4.6e-65 251.9 227 59.5
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.7e-64 250.0 209 63.6
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 5.1e-64 248.4 230 58.7
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 6.6e-64 248.1 332 46.4
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.1e-62 243.0 147 76.2
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.2e-62 241.5 153 75.2
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 2.0e-60 236.5 123 89.4
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 4.4e-60 235.3 153 73.2
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 7.6e-60 234.6 145 82.8
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 2.3e-56 223.0 171 57.3
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 2.1e-49 199.9 137 62.8
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.2e-44 184.1 175 52.0
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 4.6e-41 172.2 133 60.9
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.6e-38 163.7 159 49.1
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.8e-27 125.9 63 88.9
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.2e-26 122.9 86 65.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.6e-25 119.0 63 79.4
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.0e-23 113.6 68 80.9
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.1e-21 107.8 90 62.2
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 6.9e-21 105.1 144 42.4
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.7e-19 100.5 118 48.3


User provided reference genes

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