Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 4.1e-66 254.6 131 100.0
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 1.1e-47 193.4 126 79.4
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-42 176.4 121 77.7
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-40 167.9 133 61.7
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 6.6e-40 167.5 106 82.1
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-39 166.4 131 61.8
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.5e-39 166.4 132 64.4
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-39 166.4 132 64.4
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-39 166.4 133 63.9
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-39 165.2 133 62.4
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 3.3e-39 165.2 132 65.9
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-39 165.2 133 63.2
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-39 164.9 131 61.1
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-39 164.1 133 60.2
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-39 164.1 132 60.6
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-38 162.9 131 61.8
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-38 162.9 132 62.1
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-38 162.9 133 62.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-38 162.5 132 61.4
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-38 162.2 131 61.1
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-38 162.2 133 61.7
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 4.8e-38 161.4 133 62.4
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-38 160.6 133 61.7
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-37 158.7 130 59.2
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-36 156.8 132 59.8
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-36 156.8 136 60.3
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-36 156.4 126 61.9
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-36 156.4 133 60.2
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-35 153.3 120 63.3
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 1.7e-35 152.9 130 64.6
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 2.2e-35 152.5 92 83.7
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-35 151.8 103 78.6
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-35 151.4 132 60.6
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.4e-35 150.6 129 56.6
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-34 149.8 103 77.7
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.2e-34 148.3 129 56.6
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.1e-34 147.5 129 55.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.0e-32 143.7 129 54.3
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 5.6e-31 137.9 130 56.2
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-30 135.6 133 55.6
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.8e-29 132.9 132 49.2
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 1.8e-29 132.9 100 70.0
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-29 132.9 130 55.4
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-29 131.7 133 54.1
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 1.2e-28 130.2 126 53.2
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-28 130.2 90 71.1
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.5e-28 128.3 133 48.9
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-28 127.9 133 52.6
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-28 127.9 133 54.1
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 5.8e-28 127.9 130 46.9
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 9.9e-28 127.1 132 47.7
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-27 125.9 133 53.4
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.8e-27 125.2 119 52.1
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 8.4e-27 124.0 87 71.3
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.3e-26 120.6 92 62.0
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 7.9e-25 117.5 85 69.4
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-24 117.1 82 70.7
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-24 116.7 87 69.0
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.8e-24 116.3 122 50.0
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 3.0e-24 115.5 134 48.5
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.1e-23 113.6 126 48.4
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-23 112.8 129 49.6
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.5e-23 112.5 89 59.6
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 2.5e-23 112.5 92 59.8
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-23 111.3 132 47.0
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.6e-23 111.3 101 50.5
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 7.4e-23 110.9 133 48.9
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-22 110.2 107 50.5
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 2.1e-22 109.4 133 46.6
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 2.8e-22 109.0 104 45.2
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 3.7e-22 108.6 86 64.0
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 6.2e-22 107.8 108 53.7
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 6.2e-22 107.8 90 63.3
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 1.8e-21 106.3 133 45.1
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-21 105.9 84 60.7
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-21 105.5 133 45.9
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.3e-21 104.8 77 66.2
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.2e-20 103.6 86 57.0
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.6e-20 102.4 133 37.6
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 3.4e-20 102.1 107 47.7
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.5e-20 101.7 89 52.8
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 4.5e-20 101.7 76 67.1
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 5.8e-20 101.3 97 49.5
Oeu051241.1 Olea europaea HOM05D000002 ORTHO05D004433 1.7e-19 99.8 64 79.7
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 2.2e-19 99.4 104 49.0
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 3.8e-19 98.6 133 43.6
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 4.9e-19 98.2 74 62.2
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 4.9e-19 98.2 81 59.3
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 6.5e-19 97.8 129 38.0
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-18 97.1 122 42.6
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 1.4e-18 96.7 70 64.3
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.5e-18 95.9 87 50.6
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.2e-18 95.1 130 43.8
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-17 93.6 66 69.7
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 4.6e-17 91.7 66 66.7
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-17 91.3 66 66.7
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 1.0e-16 90.5 89 49.4
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 1.0e-16 90.5 89 49.4
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 2.3e-16 89.4 72 61.1
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-16 89.4 83 56.6
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 3.0e-16 89.0 78 53.8
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-16 87.8 72 62.5
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 2.5e-15 85.9 107 44.9
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 2.5e-15 85.9 135 37.0
PGSC0003DMG400033163 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.5e-15 85.9 78 44.9
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 5.7e-15 84.7 110 42.7
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 7.4e-15 84.3 69 55.1
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-15 84.0 92 45.7
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 1.6e-14 83.2 64 62.5
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.8e-14 82.4 80 46.2
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.8e-14 82.4 79 53.2
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 3.7e-14 82.0 91 40.7
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 8.2e-14 80.9 127 38.6
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 1.1e-13 80.5 81 48.1
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-13 80.5 50 80.0
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 3.1e-13 79.0 106 39.6
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.3e-13 78.2 124 37.1
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 5.3e-13 78.2 98 43.9
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 6.9e-13 77.8 76 42.1
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 9.0e-13 77.4 83 45.8
Oeu060033.1 Olea europaea HOM05D000784 ORTHO05D000116 1.0e-11 73.9 50 68.0
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-11 73.6 65 56.9
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 1.3e-11 73.6 62 58.1
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.9e-11 72.4 78 46.2
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 3.8e-11 72.0 93 43.0
CAN.G350.7 Capsicum annuum HOM05D000002 ORTHO05D004433 6.5e-11 71.2 66 50.0
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 61 57.4
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 67 55.2
Lsat_1_v5_gn_4_123500 Lactuca sativa HOM05D000002 ORTHO05D004433 1.4e-10 70.1 60 55.0
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 2.5e-10 69.3 54 66.7
SHI03826 Sapria himalayana HOM05D000002 ORTHO05D004433 7.2e-10 67.8 62 54.8
SHI17056 Sapria himalayana HOM05D000105 ORTHO05D004433 7.2e-10 67.8 67 46.3
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-09 66.2 57 57.9
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-09 65.5 57 56.1
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 4.6e-09 65.1 77 44.2
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 4.6e-09 65.1 68 52.9
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 7.9e-09 64.3 86 37.2
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-08 63.5 58 55.2
Oeu046444.1 Olea europaea HOM05D000002 ORTHO05D004433 1.8e-08 63.2 37 86.5
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 2.3e-08 62.8 75 45.3
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 2.3e-08 62.8 75 46.7
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 3.9e-08 62.0 86 37.2
Nn4g24889 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-07 60.1 62 43.5
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 2.5e-07 59.3 80 40.0
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 2.5e-07 59.3 80 40.0
CsaV3_6G015590 Cucumis sativus L. HOM05D000002 ORTHO05D004433 4.3e-07 58.5 89 42.7
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 4.3e-07 58.5 60 48.3
SHI29049 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-06 56.6 57 49.1
TPR.G19468 Trifolium pratense HOM05D000097 ORTHO05D000041 3.7e-06 55.5 101 33.7
TPR.G9293 Trifolium pratense HOM05D000002 ORTHO05D000001 3.7e-06 55.5 114 31.6
Sopen11g025380 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 54.3 113 32.7


User provided reference genes

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