Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035956.1 Olea europaea HOM05D007393 ORTHO05D003296 2.0e-214 748.8 385 100.0
Oeu017790.1 Olea europaea HOM05D007393 ORTHO05D003296 1.4e-32 144.8 101 72.3
Sabra03G0075400 Salix brachista HOM05D002424 ORTHO05D002640 1.4e-32 144.8 309 36.2
FAN06G2485 Fragaria x ananassa HOM05D002424 ORTHO05D002640 1.4e-29 134.8 282 37.2
vmacro06803 Vaccinium macrocarpon HOM05D007393 ORTHO05D003296 1.8e-29 134.4 132 54.5
Duzib068G1002 Durio zibethinus HOM05D007393 ORTHO05D003296 3.1e-29 133.7 133 54.1
Thecc.03G155400 Theobroma cacao HOM05D007393 ORTHO05D003296 4.1e-29 133.3 133 54.9
Migut.F01185 Erythranthe guttata HOM05D007393 ORTHO05D003296 6.9e-29 132.5 96 67.7
QL09p005721 Quercus lobata HOM05D007393 ORTHO05D003296 1.2e-28 131.7 130 53.1
Rhsim03G0167100 Rhododendron simsii HOM05D007393 ORTHO05D003296 1.2e-28 131.7 155 47.1
Duzib205G1221 Durio zibethinus HOM05D007393 ORTHO05D003296 1.5e-28 131.3 102 64.7
Manes.06G134500 Manihot esculenta HOM05D007393 ORTHO05D003296 4.5e-28 129.8 102 63.7
GSVIVG01018663001 Vitis vinifera HOM05D007393 ORTHO05D003296 4.5e-28 129.8 94 70.2
FAN01G2086 Fragaria x ananassa HOM05D002424 ORTHO05D002640 5.9e-28 129.4 278 36.7
CiPaw.04G059800 Carya illinoinensis HOM05D007393 ORTHO05D003296 1.3e-27 128.3 131 52.7
Lsat_1_v5_gn_2_128600 Lactuca sativa HOM05D007393 ORTHO05D003296 1.3e-27 128.3 131 53.4
Nn1g01022 Nelumbo nucifera HOM05D007393 ORTHO05D003296 1.3e-27 128.3 139 49.6
HanXRQChr14g0461331 Helianthus annuus HOM05D007393 ORTHO05D003296 1.7e-27 127.9 131 55.7
Potri.003G108900 Populus trichocarpa HOM05D007393 ORTHO05D003296 2.2e-27 127.5 138 49.3
Sabra01G0095900 Salix brachista HOM05D007393 ORTHO05D003296 2.2e-27 127.5 138 50.0
PSO782G2307 Papaver somniferum HOM05D007393 ORTHO05D003296 2.9e-27 127.1 104 62.5
CSS0002664 Camellia sinensis var. sinensis HOM05D007393 ORTHO05D003296 3.8e-27 126.7 108 61.1
Gorai.001G048700 Gossypium raimondii HOM05D007393 ORTHO05D003296 3.8e-27 126.7 104 61.5
TAR374G1149 Trochodendron aralioides HOM05D007393 ORTHO05D003296 3.8e-27 126.7 134 49.3
CDE02G4497 Ceratophyllum demersum HOM05D007393 ORTHO05D003296 5.0e-27 126.3 136 51.5
Gohir.A07G041500 Gossypium hirsutum HOM05D007393 ORTHO05D003296 5.0e-27 126.3 101 62.4
Hma1.2p1_1132F.1_g260300 Hydrangea macrophylla HOM05D007393 ORTHO05D003296 5.0e-27 126.3 131 55.7
Lalb_Chr03g0024251 Lupinus albus HOM05D007393 ORTHO05D003296 5.0e-27 126.3 129 49.6
Potri.001G124400 Populus trichocarpa HOM05D007393 ORTHO05D003296 5.0e-27 126.3 138 49.3
CSS0024438 Camellia sinensis var. sinensis HOM05D007393 ORTHO05D003296 6.5e-27 125.9 108 61.1
Cc02_g04310 Coffea canephora HOM05D007393 ORTHO05D003296 6.5e-27 125.9 102 64.7
Hma1.2p1_1132F.1_g260290 Hydrangea macrophylla HOM05D007393 ORTHO05D003296 6.5e-27 125.9 105 63.8
Lalb_Chr19g0140141 Lupinus albus HOM05D007393 ORTHO05D003296 6.5e-27 125.9 101 59.4
Medtr0004s0440 Medicago truncatula HOM05D007393 ORTHO05D003296 6.5e-27 125.9 130 50.0
PSO063G3575 Papaver somniferum HOM05D007393 ORTHO05D003296 6.5e-27 125.9 110 58.2
Cfa008164 Carpinus fangiana HOM05D007393 ORTHO05D003296 8.5e-27 125.6 104 59.6
Sopen03g023980 Solanum pennellii HOM05D007393 ORTHO05D003296 1.1e-26 125.2 129 51.2
Gohir.D07G045600 Gossypium hirsutum HOM05D007393 ORTHO05D003296 1.9e-26 124.4 101 61.4
Peaxi162Scf00241g00016 Petunia axillaris HOM05D007393 ORTHO05D003296 1.9e-26 124.4 131 50.4
SalBow1G6640 Salvia bowleyana HOM05D007393 ORTHO05D003296 2.5e-26 124.0 104 61.5
CDE04G2691 Ceratophyllum demersum HOM05D007393 ORTHO05D003296 3.2e-26 123.6 93 66.7
Nitab4.5_0002816g0020 Nicotiana tabacum HOM05D007393 ORTHO05D003296 3.2e-26 123.6 132 49.2
Solyc03g093180.1 Solanum lycopersicum HOM05D007393 ORTHO05D003296 3.2e-26 123.6 129 50.4
TWI23G0070 Tripterygium wilfordii HOM05D007393 ORTHO05D003296 3.2e-26 123.6 98 61.2
Ca_19630_v3 Cicer arietinum L. HOM05D007393 ORTHO05D003296 5.5e-26 122.9 102 59.8
Lj3g0002150 Lotus japonicus HOM05D007393 ORTHO05D003296 5.5e-26 122.9 93 62.4
TPR.G20257 Trifolium pratense HOM05D007393 ORTHO05D003296 7.2e-26 122.5 103 59.2
CANSAT01G0310 Cannabis sativa HOM05D007393 ORTHO05D003296 9.4e-26 122.1 101 57.4
Lj8C42T7 Lonicera japonica HOM05D007393 ORTHO05D003296 9.4e-26 122.1 125 52.0
MD01G1182600 Malus domestica HOM05D007393 ORTHO05D003296 9.4e-26 122.1 104 58.7
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 1.2e-25 121.7 102 58.8
DCAR_009585 Daucus carota HOM05D007393 ORTHO05D003296 1.2e-25 121.7 130 50.8
Nitab4.5_0004921g0010 Nicotiana tabacum HOM05D007393 ORTHO05D003296 1.2e-25 121.7 132 48.5
CAN.G48.28 Capsicum annuum HOM05D007393 ORTHO05D003296 1.6e-25 121.3 132 48.5
Glyma.09G224200 Glycine max HOM05D007393 ORTHO05D003296 1.6e-25 121.3 103 55.3
Aqoxy5G03887 Aquilegia oxysepala HOM05D007393 ORTHO05D003296 2.1e-25 120.9 90 62.2
MD07G1253300 Malus domestica HOM05D007393 ORTHO05D003296 2.7e-25 120.6 104 57.7
Phvul.011G015800 Phaseolus vulgaris HOM05D007393 ORTHO05D003296 2.7e-25 120.6 102 54.9
RcHm_v2.0_Chr1g0374261 Rosa chinensis HOM05D007393 ORTHO05D003296 2.7e-25 120.6 133 47.4
arahy.Tifrunner.gnm1.ann1.DE38H7 Arachis hypogaea HOM05D007393 ORTHO05D003296 3.6e-25 120.2 105 58.1
AUR62022937 Chenopodium quinoa HOM05D007393 ORTHO05D003296 4.7e-25 119.8 102 57.8
Eucgr.K00161 Eucalyptus grandis HOM05D007393 ORTHO05D003296 4.7e-25 119.8 93 62.4
FvH4_7g27470 Fragaria vesca HOM05D007393 ORTHO05D003296 4.7e-25 119.8 133 47.4
MELO3C006810.2 Cucumis melo HOM05D007393 ORTHO05D003296 6.1e-25 119.4 102 57.8
Psat7g156560 Pisum sativum HOM05D007393 ORTHO05D003296 6.1e-25 119.4 103 57.3
Prupe.2G276800 Prunus persica HOM05D007393 ORTHO05D003296 6.1e-25 119.4 106 56.6
Sed0026291 Sechium edule HOM05D007393 ORTHO05D003296 6.1e-25 119.4 93 62.4
AUR62012298 Chenopodium quinoa HOM05D007393 ORTHO05D003296 1.0e-24 118.6 102 57.8
Glyma.12G012800 Glycine max HOM05D007393 ORTHO05D003296 1.4e-24 118.2 96 57.3
HanXRQChr07g0205741 Helianthus annuus HOM05D007393 ORTHO05D003296 1.4e-24 118.2 93 63.4
MBI04_g09482_MAGBIO Magnolia biondii HOM05D007393 ORTHO05D003296 1.4e-24 118.2 108 56.5
Cpa.g.sc55.20 Carica papaya HOM05D007393 ORTHO05D003296 5.2e-24 116.3 131 48.9
PGR142G2640 Punica granatum HOM05D007393 ORTHO05D003296 5.2e-24 116.3 104 53.8
PGSC0003DMG400046676 Solanum tuberosum HOM05D007393 ORTHO05D003296 1.5e-23 114.8 132 47.7
Ciclev10005804m.g Citrus clementina HOM05D007393 ORTHO05D003296 3.3e-23 113.6 134 45.5
Sc10g0002600 Simmondsia chinensis HOM05D007393 ORTHO05D003296 7.4e-23 112.5 128 44.5
Atru.chr1.731 Acer truncatum HOM05D007393 ORTHO05D003296 2.2e-22 110.9 94 58.5
Aa31LG4G16230 Aethionema arabicum HOM05D007393 ORTHO05D003296 3.7e-22 110.2 133 46.6
EL10Ac2g04889 Beta vulgaris HOM05D007393 ORTHO05D003296 4.8e-22 109.8 104 51.9
Zm00001eb075550 Zea mays HOM05D007393 ORTHO05D003296 4.8e-22 109.8 105 56.2
Thhalv10010697m.g Eutrema salsugineum HOM05D007393 ORTHO05D003296 2.4e-21 107.5 133 46.6
SEGI_21258 Sequoiadendron giganteum HOM05D007393 ORTHO05D003296 3.1e-21 107.1 93 57.0
THA.LOC104819449 Tarenaya hassleriana HOM05D007393 ORTHO05D003296 3.1e-21 107.1 131 45.0
Carub.0005s1352 Capsella rubella HOM05D007393 ORTHO05D003296 4.1e-21 106.7 133 46.6
Os04g0534600 Oryza sativa ssp. japonica HOM05D007393 ORTHO05D003296 4.1e-21 106.7 128 46.1
CARHR156070 Cardamine hirsuta HOM05D007393 ORTHO05D003296 7.0e-21 105.9 133 45.9
HPP92_015114 Vanilla planifolia HOM05D007393 ORTHO05D003296 7.0e-21 105.9 122 46.7
Haze_13880 Corylus avellana HOM05D007393 ORTHO05D003296 9.1e-21 105.5 100 55.0
BcaB01g00925 Brassica carinata HOM05D007393 ORTHO05D003296 3.5e-20 103.6 103 49.5
AL5G26650 Arabidopsis lyrata HOM05D007393 ORTHO05D003296 4.5e-20 103.2 103 52.4
AT3G47430 Arabidopsis thaliana HOM05D007393 ORTHO05D003296 4.5e-20 103.2 98 55.1
Ah.10g036240 Amaranthus hybridus HOM05D007393 ORTHO05D003296 5.9e-20 102.8 102 51.0
BcaC01g01825 Brassica carinata HOM05D007393 ORTHO05D003296 1.0e-19 102.1 103 48.5
Sp5g14450 Schrenkiella parvula HOM05D007393 ORTHO05D003296 1.0e-19 102.1 103 50.5
unitig_52.g16823 Utricularia gibba HOM05D007393 ORTHO05D003296 1.0e-19 102.1 101 51.5
COL.COLO4_14119 Corchorus olitorius HOM05D002424 ORTHO05D002640 1.7e-19 101.3 67 71.6
SMO137G0166 Selaginella moellendorffii HOM05D007393 ORTHO05D003296 1.7e-19 101.3 117 46.2
C03p71570 Brassica napus HOM05D007393 ORTHO05D003296 3.8e-19 100.1 102 49.0
BolC3t19448H Brassica oleracea HOM05D007393 ORTHO05D003296 3.8e-19 100.1 102 49.0
BraA06t25106Z Brassica rapa HOM05D007393 ORTHO05D003296 3.8e-19 100.1 102 49.0
A06p20230 Brassica napus HOM05D007393 ORTHO05D003296 5.0e-19 99.8 102 49.0
Pp3c24_12360 Physcomitrium patens HOM05D007393 ORTHO05D003296 1.1e-18 98.6 92 52.2
Pp3c26_4230 Physcomitrium patens HOM05D007393 ORTHO05D003296 8.0e-17 92.4 105 44.8
Pp3c3_15780 Physcomitrium patens HOM05D007393 ORTHO05D003296 7.5e-15 85.9 89 47.2
CBR_g40763 Chara braunii HOM05D007393 ORTHO05D003296 1.3e-14 85.1 93 47.3
Oeu006285.1 Olea europaea HOM05D000220 ORTHO05D000141 1.3e-14 85.1 68 63.2
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 4.1e-13 80.1 69 58.0
Mapoly0002s0207 Marchantia polymorpha HOM05D007393 ORTHO05D003296 5.3e-13 79.7 99 42.4
Oeu062364.1 Olea europaea HOM05D000950 ORTHO05D000774 1.2e-12 78.6 64 62.5
Oeu009059.1 Olea europaea HOM05D000182 ORTHO05D000112 1.6e-12 78.2 66 60.6
Oeu010438.1 Olea europaea HOM05D000969 ORTHO05D291885 1.0e-11 75.5 47 78.7
Oeu017789.1 Olea europaea HOM05D002424 ORTHO05D002640 2.2e-11 74.3 37 94.6
Oeu042368.1 Olea europaea HOM05D002485 ORTHO05D002629 2.2e-11 74.3 52 65.4
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 6.5e-11 72.8 51 66.7
Oeu011085.1 Olea europaea HOM05D001574 ORTHO05D000708 4.7e-09 66.6 45 73.3
Oeu029660.1 Olea europaea HOM05D000065 ORTHO05D003979 8.0e-09 65.9 39 79.5
unitig_578.g16621 Utricularia gibba HOM05D002424 ORTHO05D002640 1.0e-08 65.5 37 81.1
Migut.F00480 Erythranthe guttata HOM05D002424 ORTHO05D002640 1.8e-08 64.7 37 78.4
Oeu032196.1 Olea europaea HOM05D000493 ORTHO05D001355 1.8e-08 64.7 35 85.7
Oeu032991.1 Olea europaea HOM05D000021 ORTHO05D000010 1.8e-08 64.7 40 75.0
Oeu054089.1 Olea europaea HOM05D010873 ORTHO05D013124 2.3e-08 64.3 100 46.0
Oeu042558.2 Olea europaea HOM05D002424 ORTHO05D002640 3.0e-08 63.9 59 57.6
MSTRG.8410 Avicennia marina HOM05D002424 ORTHO05D002640 4.0e-08 63.5 37 75.7
Oeu057635.1 Olea europaea HOM05D000043 ORTHO05D001551 4.0e-08 63.5 37 78.4
HPP92_015105 Vanilla planifolia HOM05D007393 ORTHO05D003296 4.0e-08 63.5 74 43.2
Oeu000736.1 Olea europaea HOM05D010873 ORTHO05D013124 6.8e-08 62.8 38 81.6
MSTRG.8851 Avicennia marina HOM05D002424 ORTHO05D002640 1.2e-07 62.0 37 78.4
Oeu020512.1 Olea europaea HOM05D001574 ORTHO05D000708 1.2e-07 62.0 42 73.8
Oeu048466.1 Olea europaea HOM05D006164 ORTHO05D001269 2.0e-07 61.2 33 87.9
Oeu055791.1 Olea europaea HOM05D001324 ORTHO05D001220 2.0e-07 61.2 47 66.0
Oeu060116.1 Olea europaea HOM05D010873 ORTHO05D013124 2.6e-07 60.8 33 87.9
Oeu024087.1 Olea europaea HOM05D010873 ORTHO05D013124 3.4e-07 60.5 33 87.9
SGA_v2.0_scaffold44G16548 Striga asiatica HOM05D002424 ORTHO05D002640 5.7e-07 59.7 37 75.7
SalBow2G1102 Salvia bowleyana HOM05D002424 ORTHO05D002640 9.8e-07 58.9 31 80.6
CiPaw.13G030100 Carya illinoinensis HOM05D002424 ORTHO05D002640 1.3e-06 58.5 38 76.3
Migut.F01186 Erythranthe guttata HOM05D002424 ORTHO05D002640 1.3e-06 58.5 37 73.0
unitig_85.g27172 Utricularia gibba HOM05D002424 ORTHO05D002640 3.7e-06 57.0 38 73.7
Nitab4.5_0002816g0080 Nicotiana tabacum HOM05D002424 ORTHO05D002640 4.8e-06 56.6 31 80.6
BcaB02g11343 Brassica carinata HOM05D006235 ORTHO05D003296 6.3e-06 56.2 99 31.3
CDE04G1780 Ceratophyllum demersum HOM05D006235 ORTHO05D003296 6.3e-06 56.2 93 32.3
Cc02_g28070 Coffea canephora HOM05D002424 ORTHO05D002640 6.3e-06 56.2 33 75.8
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 6.3e-06 56.2 38 71.1
Oeu057323.1 Olea europaea HOM05D000011 ORTHO05D000018 6.3e-06 56.2 34 82.4
vmacro09911 Vaccinium macrocarpon HOM05D002424 ORTHO05D002640 6.3e-06 56.2 37 73.0
Sed0020292 Sechium edule HOM05D002424 ORTHO05D002640 8.3e-06 55.8 30 83.3


User provided reference genes

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