Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.6e-206 722.6 385 100.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 4.3e-172 608.2 387 83.7
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.1e-170 603.6 387 82.9
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 3.4e-169 598.6 385 85.2
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.5e-169 598.2 385 77.7
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.8e-168 595.1 361 86.1
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 4.9e-168 594.7 406 78.8
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.4e-167 593.2 368 84.5
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.2e-167 591.7 387 81.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.2e-166 590.1 362 85.4
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.7e-166 589.0 384 81.2
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.7e-166 589.0 387 79.1
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.0e-165 585.5 380 81.1
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.9e-165 585.1 376 77.7
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 6.7e-165 584.3 383 80.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.5e-164 583.2 387 77.0
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.5e-164 583.2 367 83.1
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.3e-164 582.0 379 78.4
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 4.3e-164 581.6 380 81.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 4.3e-164 581.6 380 81.3
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.3e-164 581.6 376 77.7
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.7e-164 581.3 386 79.0
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 5.7e-164 581.3 388 79.6
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 7.4e-164 580.9 386 79.0
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.3e-163 580.1 387 76.7
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.6e-163 579.7 374 81.6
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.1e-163 579.3 371 80.9
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.8e-163 578.2 386 78.5
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.8e-162 576.2 386 77.7
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.8e-162 576.2 387 75.7
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.4e-162 575.9 391 78.8
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-162 575.5 375 81.1
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 6.9e-162 574.3 373 82.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.5e-161 573.2 369 80.8
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.0e-161 572.8 383 79.6
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.0e-161 572.8 375 81.1
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.0e-161 572.8 386 76.2
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.6e-161 572.4 386 75.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.4e-161 572.0 379 79.2
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.7e-160 569.7 373 81.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.2e-160 569.3 387 77.5
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 2.9e-160 568.9 389 73.5
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 2.9e-160 568.9 375 80.0
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.9e-160 568.9 375 80.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.9e-160 568.9 359 82.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 3.8e-160 568.5 384 74.7
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 5.0e-160 568.2 383 76.8
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 5.0e-160 568.2 375 78.7
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 6.5e-160 567.8 360 79.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 6.5e-160 567.8 375 79.5
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 8.5e-160 567.4 375 80.3
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 8.5e-160 567.4 368 76.6
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 4.2e-159 565.1 367 80.4
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 5.5e-159 564.7 382 75.9
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 7.2e-159 564.3 381 78.5
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 9.3e-159 563.9 369 77.5
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.3e-159 563.9 365 81.6
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 9.3e-159 563.9 367 77.4
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 2.1e-158 562.8 386 78.2
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.6e-158 561.6 374 79.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 6.1e-158 561.2 381 77.2
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.0e-157 560.5 402 72.4
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 5.1e-157 558.1 365 79.5
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.1e-156 557.0 391 77.0
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.5e-156 556.6 385 74.5
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.9e-156 556.2 382 77.0
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 2.5e-156 555.8 372 79.0
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 2.5e-156 555.8 384 77.9
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 4.3e-156 555.1 355 77.5
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 5.7e-156 554.7 379 75.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 5.7e-156 554.7 363 80.7
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.3e-155 553.5 362 80.1
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.3e-155 553.5 362 77.9
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.6e-155 553.1 362 76.8
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 2.2e-155 552.7 360 80.3
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 2.8e-155 552.4 351 78.3
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 4.8e-155 551.6 383 77.5
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 8.2e-155 550.8 361 76.5
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.1e-154 550.4 362 77.9
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 2.4e-154 549.3 368 79.1
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 6.9e-154 547.7 353 81.0
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 9.1e-154 547.4 363 80.2
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 9.1e-154 547.4 363 80.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.2e-153 547.0 357 81.0
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.5e-153 546.6 362 75.4
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.5e-153 546.6 367 74.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.4e-153 545.4 354 76.6
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.7e-152 543.1 363 79.6
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.9e-152 542.3 383 76.0
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.8e-152 542.0 367 78.5
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.8e-152 542.0 407 74.0
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.0e-152 541.6 383 75.7
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.1e-151 540.4 382 72.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.2e-151 538.5 381 76.1
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-150 537.0 368 72.6
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.2e-150 537.0 364 77.2
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 6.1e-150 534.6 363 78.8
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.4e-149 533.5 341 79.8
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.4e-149 533.5 351 77.5
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 5.1e-149 531.6 384 76.0
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 6.7e-149 531.2 363 78.5
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 6.7e-149 531.2 363 78.5
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 8.8e-149 530.8 366 71.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.1e-148 530.4 366 71.9
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 2.0e-148 529.6 366 71.9
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 5.7e-148 528.1 333 78.4
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.7e-147 526.6 359 77.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 3.7e-147 525.4 367 71.9
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.7e-147 525.4 364 71.4
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.4e-146 523.5 380 74.2
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.4e-146 522.7 477 62.5
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 2.4e-146 522.7 368 71.2
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 4.1e-146 521.9 367 71.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 3.4e-145 518.8 317 77.9
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.3e-144 516.9 377 69.2
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.3e-144 516.9 345 73.3
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 2.2e-144 516.2 355 74.1
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 2.9e-144 515.8 306 80.1
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 5.0e-144 515.0 358 72.1
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.1e-140 503.8 377 71.9
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.0e-140 503.1 314 79.0
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 4.4e-140 501.9 350 70.9
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 5.7e-140 501.5 360 68.6
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-139 499.6 313 76.7
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 7.7e-137 491.1 300 78.3
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 8.5e-136 487.6 390 66.2
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.4e-133 480.3 366 72.1
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.3e-133 479.6 384 69.0
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 5.2e-133 478.4 349 72.2
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.7e-131 473.4 296 83.4
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.2e-131 473.0 347 72.3
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.2e-131 473.0 298 74.5
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 9.1e-130 467.6 356 72.2
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.7e-128 463.4 399 63.9
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.1e-127 460.7 280 78.6
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 1.4e-125 453.8 300 69.3
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-124 450.7 307 73.9
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.6e-120 434.5 298 67.4
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 7.2e-119 431.4 370 63.5
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 9.5e-119 431.0 368 64.4
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.2e-118 430.6 298 66.1
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.1e-118 429.9 368 68.8
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.6e-118 429.1 349 60.7
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 8.8e-117 424.5 314 64.6
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.8e-115 419.5 266 76.7
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.6e-113 413.7 303 65.0
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 1.5e-108 397.1 410 53.7
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.2e-106 389.4 240 80.8
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.3e-103 379.4 221 82.4
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 8.1e-94 348.2 299 56.5
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.6e-86 323.9 211 69.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 4.1e-82 309.3 246 66.7
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 3.5e-65 253.1 150 79.3
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 7.4e-63 245.4 376 44.1
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 8.4e-59 231.9 170 72.9
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 4.2e-58 229.6 170 64.7
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.5e-42 177.2 164 56.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 5.0e-35 152.9 96 80.2
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.8e-30 137.1 280 31.8
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.8e-29 134.4 100 67.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.6e-25 121.3 350 28.6
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.0e-24 118.6 251 36.3
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 3.0e-24 117.1 282 28.4
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.4e-21 108.2 65 73.8
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 7.0e-21 105.9 90 82.2
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 7.7e-20 102.4 68 76.5
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 7.7e-20 102.4 68 76.5
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.9e-19 100.5 68 76.5
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.1e-18 98.6 80 68.8
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.6e-17 94.7 89 74.2
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 7.5e-15 85.9 59 69.5
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 7.7e-12 75.9 108 35.2
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.9e-11 73.9 122 35.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.0e-08 65.5 33 84.8
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 1.4e-08 65.1 71 73.2
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 6.8e-08 62.8 35 77.1
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 6.8e-08 62.8 41 73.2
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.2e-07 62.0 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.0e-07 61.2 39 74.4
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 4.4e-07 60.1 50 62.0


User provided reference genes

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