Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 4.4e-138 494.6 244 100.0
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.4e-88 330.1 255 67.1
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.8e-86 323.2 251 63.3
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.5e-85 320.1 216 73.1
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 3.3e-85 318.9 253 66.4
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.6e-84 316.6 217 71.0
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 4.8e-84 315.1 213 71.8
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 1.8e-83 313.2 224 69.2
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 1.8e-83 313.2 217 71.0
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 6.5e-81 304.7 233 63.1
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.2e-79 300.4 246 63.8
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 3.6e-79 298.9 197 69.5
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 1.8e-78 296.6 257 57.2
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 5.1e-78 295.0 214 65.4
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 8.8e-78 294.3 252 58.3
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 4.3e-77 292.0 220 63.6
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.3e-76 290.4 235 58.3
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.7e-76 290.0 211 64.0
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.8e-76 289.3 181 74.6
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 6.3e-76 288.1 264 55.3
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 1.8e-75 286.6 256 55.5
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 4.1e-75 285.4 220 60.9
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 1.2e-74 283.9 195 66.7
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.5e-74 283.5 207 69.1
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.7e-73 280.0 218 60.1
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 5.0e-73 278.5 229 58.5
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 1.1e-72 277.3 253 55.3
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.9e-72 276.6 167 76.0
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 2.5e-72 276.2 183 72.7
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 4.2e-72 275.4 197 71.6
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 7.2e-72 274.6 195 64.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 9.4e-72 274.2 195 64.1
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 3.6e-71 272.3 186 67.7
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 6.1e-71 271.6 163 76.7
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.8e-70 270.0 196 63.8
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 2.3e-70 269.6 193 65.8
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 8.8e-70 267.7 197 63.5
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 1.5e-69 266.9 210 61.4
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.0e-69 266.5 198 64.1
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.3e-69 265.8 201 63.7
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 4.4e-69 265.4 193 66.8
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 5.7e-69 265.0 201 63.7
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.7e-68 262.3 201 62.7
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 8.2e-68 261.2 194 62.9
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.8e-67 260.0 174 69.0
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.8e-67 260.0 217 58.1
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.4e-67 259.6 194 62.4
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 5.3e-67 258.5 161 72.0
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 7.0e-67 258.1 194 63.9
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 7.0e-67 258.1 196 61.7
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 7.0e-67 258.1 249 54.6
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 7.0e-67 258.1 257 52.5
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.5e-66 256.9 226 54.4
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 1.5e-66 256.9 193 61.7
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.5e-66 256.9 194 60.8
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.0e-66 256.5 198 59.6
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.6e-66 256.1 226 55.3
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.5e-66 255.4 224 55.4
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 4.5e-66 255.4 192 60.9
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 4.5e-66 255.4 190 59.5
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 5.9e-66 255.0 210 58.6
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 5.9e-66 255.0 194 60.3
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.3e-65 253.8 195 59.0
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.3e-65 253.8 239 53.1
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 1.7e-65 253.4 192 62.0
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.2e-65 253.1 211 55.0
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 3.8e-65 252.3 219 55.3
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.8e-65 252.3 195 60.5
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 5.0e-65 251.9 238 52.5
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 5.0e-65 251.9 209 55.5
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 6.5e-65 251.5 195 62.6
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 8.5e-65 251.1 191 58.6
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.1e-64 250.8 178 65.7
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.9e-64 250.0 199 59.3
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.5e-64 249.6 210 56.2
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 2.5e-64 249.6 215 54.9
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 3.2e-64 249.2 199 59.3
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 9.4e-64 247.7 197 56.9
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 9.4e-64 247.7 198 59.1
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 9.4e-64 247.7 199 58.8
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 9.4e-64 247.7 192 58.9
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 8.0e-63 244.6 233 51.9
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.4e-62 243.8 212 57.5
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.3e-62 243.0 162 66.7
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 3.9e-62 242.3 213 56.8
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.1e-61 240.7 205 61.0
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.6e-61 239.6 235 51.9
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.3e-61 239.2 192 59.9
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 5.7e-61 238.4 191 58.6
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 7.4e-61 238.0 330 40.9
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.3e-60 237.3 272 47.1
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 2.8e-60 236.1 197 57.4
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 2.8e-60 236.1 192 58.3
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.8e-59 233.4 229 53.3
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.5e-58 228.8 244 50.4
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.7e-57 226.9 221 51.6
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.6e-55 220.3 217 51.6
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 2.4e-51 206.5 190 48.9
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.0e-50 203.4 120 76.7
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 4.7e-47 192.2 192 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 4.1e-43 179.1 179 48.6
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 5.5e-40 168.7 180 43.3
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 9.5e-40 167.9 204 48.5
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 5.4e-35 152.1 169 40.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.0e-33 147.9 127 56.7
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.6e-33 145.2 118 62.7
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 7.8e-26 121.7 90 66.7
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 6.6e-25 118.6 195 34.4
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.2e-23 114.4 209 34.0
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 2.3e-22 110.2 66 68.2
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 6.8e-22 108.6 163 37.4
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-19 100.9 77 63.6
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 4.6e-10 69.3 104 36.5
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 4.3e-08 62.8 51 51.0
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 3.1e-06 56.6 32 68.8
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 3.1e-06 56.6 32 68.8


User provided reference genes

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