Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.8e-111 406.0 210 100.0
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 5.9e-91 337.8 209 84.7
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.7e-58 229.9 224 63.8
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 6.2e-56 221.5 217 60.4
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 5.8e-54 214.9 203 64.0
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 8.4e-53 211.1 225 60.0
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.0e-50 204.1 217 57.1
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.3e-50 203.8 223 60.1
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 3.3e-49 199.1 216 56.9
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.6e-49 198.4 208 58.2
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 7.3e-49 198.0 219 56.6
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 6.2e-48 194.9 217 55.3
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 3.1e-47 192.6 217 58.1
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.4e-46 189.1 212 56.6
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 5.8e-46 188.3 218 55.0
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 1.7e-45 186.8 213 53.1
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.2e-45 186.4 218 54.6
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.4e-44 183.0 214 54.2
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 5.4e-44 181.8 223 56.1
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.2e-43 180.6 218 51.4
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.6e-43 180.3 215 52.1
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 3.5e-43 179.1 216 54.2
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.0e-42 177.6 218 55.0
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.3e-42 177.2 213 49.3
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.3e-42 176.4 213 53.5
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.0e-42 176.0 214 52.8
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 3.0e-42 176.0 213 52.6
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 5.1e-42 175.3 207 53.6
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 6.7e-42 174.9 217 51.2
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.5e-41 173.7 217 53.0
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 2.5e-41 172.9 217 53.5
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.3e-41 172.2 222 55.0
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.6e-40 170.2 214 52.3
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.6e-40 170.2 212 51.4
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 2.1e-40 169.9 214 50.9
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 8.1e-40 167.9 210 50.5
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 8.1e-40 167.9 206 50.5
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 8.1e-40 167.9 215 54.4
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 9.0e-39 164.5 214 49.5
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.2e-38 164.1 214 50.9
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.5e-38 163.7 212 50.0
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.5e-38 163.7 214 51.9
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.6e-38 162.9 216 51.4
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.8e-38 161.8 214 51.9
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 5.8e-38 161.8 209 49.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 5.8e-38 161.8 215 51.6
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.6e-38 161.4 212 51.4
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 7.6e-38 161.4 226 50.0
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.3e-37 160.6 209 48.8
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.2e-37 159.8 211 49.8
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.8e-37 159.1 215 50.2
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.2e-36 156.0 195 52.3
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 3.2e-36 156.0 189 51.9
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 7.1e-36 154.8 212 49.5
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.2e-35 154.1 213 49.3
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.6e-35 153.7 197 50.3
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.1e-35 153.3 214 49.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.1e-35 153.3 189 51.3
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 6.0e-35 151.8 213 48.8
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 6.0e-35 151.8 213 48.8
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.3e-34 150.6 223 51.1
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 2.3e-34 149.8 217 46.5
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 5.1e-34 148.7 206 49.0
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 3.3e-33 146.0 214 46.3
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 7.4e-33 144.8 216 48.1
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.1e-32 143.3 212 46.7
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.1e-32 143.3 207 47.8
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 2.8e-32 142.9 209 49.8
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.1e-31 141.0 210 50.0
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 6.9e-31 138.3 211 46.4
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.0e-29 134.4 208 46.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.9e-29 132.9 149 55.7
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.9e-29 132.9 219 47.9
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.9e-29 132.9 213 48.4
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.1e-28 131.0 189 46.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.5e-28 129.8 211 46.0
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 4.2e-28 129.0 208 45.7
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 5.5e-28 128.6 209 45.5
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 5.5e-28 128.6 208 44.7
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 5.5e-28 128.6 212 46.7
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 7.1e-28 128.3 215 46.5
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 9.3e-28 127.9 209 47.8
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 9.3e-28 127.9 212 46.2
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.2e-27 127.5 217 42.9
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 2.1e-27 126.7 186 51.6
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.1e-27 125.2 183 46.4
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 1.8e-26 123.6 215 43.7
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 1.8e-26 123.6 220 47.3
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.3e-26 123.2 209 45.9
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 3.0e-26 122.9 209 44.0
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 5.1e-26 122.1 202 42.6
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 5.1e-26 122.1 202 42.1
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 5.1e-26 122.1 202 42.6
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 5.1e-26 122.1 202 42.1
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 6.7e-26 121.7 208 41.3
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 1.9e-25 120.2 203 42.4
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 2.5e-25 119.8 211 41.7
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 7.4e-25 118.2 175 48.0
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 9.7e-25 117.9 214 43.9
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 9.7e-25 117.9 171 46.2
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 3.7e-24 115.9 216 43.1
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 6.3e-24 115.2 211 40.8
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 8.2e-24 114.8 207 39.6
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.1e-23 114.4 211 41.2
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.8e-23 113.6 192 43.8
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 6.9e-23 111.7 175 46.3
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 6.9e-23 111.7 175 46.3
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 6.9e-23 111.7 258 39.1
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.5e-22 110.5 224 42.9
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 2.5e-20 103.2 192 41.7
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.6e-19 100.5 123 49.6
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.6e-19 100.5 217 38.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 2.8e-16 89.7 223 38.6
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 2.8e-16 89.7 107 54.2
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 4.8e-16 89.0 75 61.3
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 2.4e-15 86.7 224 38.4
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 6.9e-15 85.1 144 43.1
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 4.5e-14 82.4 77 55.8
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.5e-14 82.4 185 36.2
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 6.5e-13 78.6 208 37.5
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.1e-12 77.8 171 39.2
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.1e-12 77.8 171 39.2
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.1e-12 77.8 171 39.2
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 5.5e-12 75.5 176 35.2
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 4.7e-11 72.4 74 54.1
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 4.7e-11 72.4 74 54.1
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 3.0e-10 69.7 222 36.9
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 3.9e-10 69.3 182 34.6
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.0e-09 67.0 167 37.1
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.0e-09 67.0 175 37.1
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 4.8e-08 62.4 109 40.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 1.4e-07 60.8 88 43.2
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 1.4e-07 60.8 88 43.2
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-07 60.5 89 44.9
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-07 60.5 89 44.9


User provided reference genes

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