Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.7e-257 892.1 435 100.0
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 3.9e-222 774.6 435 86.7
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.7e-178 629.0 446 66.8
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.8e-173 611.3 437 68.0
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.4e-171 605.9 435 66.9
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.0e-170 601.3 437 66.4
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.6e-167 592.0 428 67.5
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.7e-167 591.7 430 67.2
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.8e-166 589.7 425 68.7
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.8e-166 589.7 461 64.0
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.8e-166 589.7 436 66.5
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 2.2e-164 582.8 430 66.3
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.9e-164 582.4 440 62.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.9e-163 579.7 435 65.5
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 5.4e-163 578.2 432 65.5
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 9.2e-163 577.4 432 65.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.2e-162 577.0 435 64.8
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.6e-162 576.6 434 64.1
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.1e-162 576.2 429 65.0
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.7e-162 575.9 377 70.8
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.0e-162 574.7 428 65.2
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 6.0e-162 574.7 404 68.8
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 7.8e-162 574.3 432 64.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.0e-161 573.9 437 62.5
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 6.6e-161 571.2 434 63.4
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.5e-160 569.3 433 64.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.5e-160 569.3 429 63.6
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.3e-160 568.9 439 62.0
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 4.3e-160 568.5 428 65.0
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 5.6e-160 568.2 444 63.1
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.2e-159 567.0 433 64.0
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.8e-159 565.8 431 63.1
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.6e-159 565.5 453 62.3
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 4.7e-159 565.1 436 62.8
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 8.1e-159 564.3 438 61.2
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.4e-158 563.5 435 64.4
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.8e-158 563.1 429 62.7
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 4.0e-158 562.0 444 62.4
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 4.0e-158 562.0 437 64.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 5.2e-158 561.6 448 60.7
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.7e-156 556.6 451 60.3
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.7e-156 556.6 429 62.0
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.9e-156 555.8 441 60.8
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 3.8e-156 555.4 438 61.9
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 4.9e-156 555.1 442 63.1
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 6.4e-156 554.7 440 61.1
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 9.2e-155 550.8 427 62.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.6e-154 550.1 430 62.1
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.6e-154 550.1 425 62.6
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.7e-154 549.3 439 61.3
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.7e-153 546.6 445 59.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.0e-153 545.8 437 60.9
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.1e-152 543.9 443 60.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.5e-152 543.5 427 61.6
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.5e-152 542.7 429 61.1
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 7.3e-152 541.2 453 58.5
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 9.6e-152 540.8 435 61.1
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 9.6e-152 540.8 435 61.1
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 9.6e-152 540.8 435 61.1
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 9.6e-152 540.8 428 62.4
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 9.6e-152 540.8 424 61.1
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.3e-151 540.4 422 61.6
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.6e-151 540.0 431 59.4
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.8e-151 539.3 433 60.3
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 3.6e-151 538.9 429 61.8
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 6.2e-151 538.1 435 60.2
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 6.2e-151 538.1 427 60.0
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.1e-150 535.8 421 61.8
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 3.1e-150 535.8 426 60.1
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 3.1e-150 535.8 418 61.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 6.9e-150 534.6 429 61.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 3.4e-149 532.3 391 66.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-149 531.9 455 58.5
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 4.4e-149 531.9 333 71.8
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 2.2e-148 529.6 432 60.9
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 2.2e-148 529.6 342 69.6
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 2.9e-148 529.3 437 59.7
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 3.8e-148 528.9 435 59.5
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.9e-147 526.6 440 58.4
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 7.1e-147 524.6 428 59.3
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.6e-146 523.5 429 59.0
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.6e-146 523.5 423 59.3
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.6e-146 523.5 419 59.9
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.5e-146 522.3 428 58.9
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 7.8e-146 521.2 421 60.1
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.0e-145 520.8 420 59.5
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.0e-145 520.8 429 58.7
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.7e-145 520.0 420 60.2
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 2.3e-145 519.6 415 59.3
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.0e-145 519.2 429 58.5
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-144 516.9 462 55.8
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 3.3e-144 515.8 418 57.9
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 3.3e-144 515.8 418 57.9
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 3.3e-144 515.8 418 57.9
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.3e-143 513.8 418 59.1
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.8e-143 512.7 407 60.2
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 3.6e-143 512.3 436 57.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.6e-143 512.3 428 58.6
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 6.2e-143 511.5 420 58.6
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.4e-142 510.4 412 59.5
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 2.4e-142 509.6 437 56.3
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.3e-142 508.4 429 57.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 6.9e-142 508.1 415 59.0
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 9.0e-142 507.7 418 59.8
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.6e-141 506.1 436 56.7
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.8e-141 505.0 430 57.0
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.9e-140 502.7 343 65.6
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.9e-139 500.0 422 57.1
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 2.7e-138 496.1 360 67.8
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 2.7e-138 496.1 353 64.6
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 6.0e-138 495.0 434 55.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 7.9e-138 494.6 426 55.9
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.3e-137 493.8 412 57.5
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.8e-137 493.4 411 58.2
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 7.4e-136 488.0 425 56.0
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.4e-134 483.8 412 57.0
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.5e-131 473.0 441 54.9
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 3.2e-131 472.6 368 59.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.5e-131 471.9 417 53.2
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-130 469.9 426 55.6
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.9e-128 463.4 446 53.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 3.3e-128 462.6 461 52.9
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 5.7e-128 461.8 416 55.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 5.7e-128 461.8 433 54.3
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.1e-127 459.9 348 60.3
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-126 456.8 408 55.9
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-126 456.4 420 54.3
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-126 456.1 421 55.1
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 5.3e-126 455.3 424 54.5
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-125 454.1 427 53.9
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.4e-125 452.6 340 61.2
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-124 451.1 443 52.8
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-124 450.3 429 53.6
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-123 446.0 422 54.5
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.2e-122 444.1 289 67.5
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-121 441.0 438 52.5
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.4e-117 426.0 396 53.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.5e-116 421.8 398 52.5
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 9.4e-115 417.9 445 50.1
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.0e-113 414.5 250 73.6
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.1e-113 412.1 287 65.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 6.7e-113 411.8 339 56.6
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-110 404.1 449 47.2
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.8e-110 403.7 356 53.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 6.9e-110 401.7 339 55.2
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 6.5e-108 395.2 350 54.3
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.0e-105 386.3 252 67.5
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.7e-103 380.6 356 51.4
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.1e-102 375.9 377 49.6
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 9.1e-102 374.8 307 57.0
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.6e-101 373.2 240 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.7e-98 362.5 361 47.6
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.0e-97 359.8 241 65.6
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.5e-96 357.5 339 49.9
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.6e-93 346.7 353 47.3
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 4.5e-93 345.9 237 64.6
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.8e-87 326.6 349 46.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 4.8e-87 325.9 315 57.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 7.0e-86 322.0 397 44.6
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.0e-85 320.5 237 59.5
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.7e-79 299.7 300 48.0
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.1e-78 296.6 339 43.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.9e-77 292.4 344 43.0
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-76 290.8 340 43.8
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.3e-76 290.4 371 39.4
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 7.2e-75 285.4 349 42.1
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-74 284.3 241 53.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.0e-74 282.0 345 39.7
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.4e-64 249.6 343 38.2
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 3.6e-58 229.9 353 35.7
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.6e-40 170.6 152 56.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 7.6e-40 169.1 154 53.9
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.7e-37 160.6 415 28.4
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 7.6e-24 115.9 85 54.1
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.2e-21 108.6 114 43.9
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.3e-18 98.6 79 50.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.3e-17 93.2 119 37.8
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.9e-15 87.4 100 40.0
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.0e-12 79.0 123 40.7
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.0e-12 77.4 88 46.6
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 3.2e-06 57.4 47 61.7


User provided reference genes

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