Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.0e-149 532.3 258 100.0
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.8e-79 298.9 240 61.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.6e-74 283.5 234 57.7
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.0e-73 278.9 243 57.6
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.9e-73 278.1 230 57.8
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.2e-72 277.3 240 55.4
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 4.9e-71 271.9 237 57.4
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.4e-70 268.5 236 57.6
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 1.3e-68 263.8 239 54.8
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.5e-67 260.4 244 53.3
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 9.6e-67 257.7 235 54.0
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.4e-65 253.8 237 53.2
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 9.0e-65 251.1 200 59.0
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.3e-63 247.3 191 60.7
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.2e-63 246.5 231 53.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.9e-63 246.1 200 59.5
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 7.1e-62 241.5 243 48.1
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.6e-61 238.8 224 54.0
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.8e-60 236.9 196 58.7
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.8e-60 236.9 204 55.9
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 3.0e-60 236.1 243 46.9
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.9e-59 233.4 196 57.7
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 2.5e-59 233.0 232 53.0
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.5e-59 233.0 257 48.2
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 5.6e-59 231.9 193 56.5
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 1.3e-58 230.7 229 49.3
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 1.6e-58 230.3 231 48.5
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 2.1e-58 229.9 232 51.7
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 6.2e-58 228.4 194 56.7
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.1e-57 227.6 197 55.3
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.4e-57 227.3 231 51.1
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 5.3e-57 225.3 229 51.5
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 9.0e-57 224.6 234 48.7
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 1.2e-56 224.2 243 48.6
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 5.8e-56 221.9 234 47.0
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 5.8e-56 221.9 192 55.2
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 7.6e-56 221.5 228 50.0
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 2.9e-55 219.5 227 49.3
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.9e-54 216.9 198 52.5
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.5e-54 216.5 230 47.8
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 2.5e-54 216.5 250 45.2
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 4.2e-54 215.7 192 56.2
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 5.5e-54 215.3 230 45.7
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 9.3e-54 214.5 227 48.9
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.2e-53 214.2 229 50.7
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.6e-53 213.8 225 48.0
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.1e-53 213.4 226 46.9
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 4.6e-53 212.2 227 48.5
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 7.9e-53 211.5 226 48.2
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 2.3e-52 209.9 273 44.0
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 2.3e-52 209.9 231 47.6
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 5.1e-52 208.8 193 52.8
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 5.1e-52 208.8 190 55.3
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 1.5e-51 207.2 226 46.5
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.9e-51 206.8 229 46.3
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 3.3e-51 206.1 238 47.5
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 4.3e-51 205.7 195 51.8
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 5.7e-51 205.3 194 52.6
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 9.6e-51 204.5 191 52.9
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 4.8e-50 202.2 194 52.1
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 4.8e-50 202.2 194 52.1
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.1e-49 201.1 194 51.5
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.1e-49 201.1 231 44.2
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.4e-49 200.7 205 48.8
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 1.4e-49 200.7 202 52.5
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.8e-49 200.3 191 50.8
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 2.4e-49 199.9 202 52.5
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.4e-49 199.9 202 48.5
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 6.9e-49 198.4 230 44.8
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.5e-48 197.2 194 49.5
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.0e-48 196.8 198 48.0
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 2.6e-48 196.4 227 44.5
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 2.6e-48 196.4 202 49.5
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 3.4e-48 196.1 190 52.1
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 3.4e-48 196.1 194 51.5
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.9e-48 195.3 189 51.9
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 7.6e-48 194.9 196 50.5
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 1.0e-47 194.5 198 48.5
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.0e-47 194.5 193 50.3
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 2.2e-47 193.4 190 50.0
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.1e-46 191.0 193 49.2
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 7.2e-46 188.3 188 52.1
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.6e-45 187.2 198 46.5
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.6e-45 187.2 236 43.2
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 7.9e-45 184.9 230 47.4
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 7.9e-45 184.9 230 47.4
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.0e-44 184.5 225 43.6
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.8e-44 183.7 139 63.3
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 5.1e-44 182.2 139 59.7
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 8.7e-44 181.4 141 58.9
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.9e-43 180.3 194 47.4
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.5e-43 179.9 227 43.2
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 9.7e-43 177.9 213 43.2
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 9.7e-43 177.9 189 49.2
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.4e-41 174.1 229 42.4
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.4e-41 174.1 228 42.5
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.4e-41 173.3 140 57.1
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 6.9e-41 171.8 139 59.0
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 7.7e-40 168.3 225 41.8
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.0e-39 167.9 138 55.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 1.4e-38 164.1 154 51.3
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.6e-37 160.6 140 55.0
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 6.1e-37 158.7 228 39.9
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.0e-36 157.9 219 39.7
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.8e-36 157.1 155 51.0
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.7e-34 150.6 142 51.4
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.7e-34 150.6 142 51.4
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.7e-34 150.6 191 39.8
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 4.8e-34 149.1 135 52.6
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.5e-32 144.1 141 50.4
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.2e-30 136.3 140 47.9
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.2e-29 134.4 73 78.1
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.4e-28 131.0 141 45.4
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.1e-25 119.8 232 34.1
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 6.7e-20 102.1 89 58.4
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 1.2e-16 91.3 234 31.6
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 1.9e-14 84.0 251 25.1
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 3.2e-14 83.2 117 36.8
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 1.4e-12 77.8 46 67.4
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 9.8e-11 71.6 51 64.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 2.2e-10 70.5 122 35.2
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 2.8e-10 70.1 256 25.8
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 6.3e-10 68.9 221 28.5
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 2.9e-07 60.1 156 30.1


User provided reference genes

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